RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C DBP9Q06218 594 aaKnown RBP7.4□□□□□ -1.22
PUP3YER094C OPT2Q06593 877 aa7.4□□□□□ -1.22
PUP3YER094C DTD1Q07648 150 aaKnown RBP7.4□□□□□ -1.22
PUP3YER094C VIK1Q12045 647 aa7.4□□□□□ -1.22
PUP3YER094C YOL159C-AQ3E769 90 aa7.4□□□□□ -1.22
PUP3YER094C GPH1P06738 902 aaKnown RBP7.39□□□□□ -1.23
PUP3YER094C HTS1P07263 546 aaKnown RBP7.39□□□□□ -1.23
PUP3YER094C ATR1P13090 542 aa7.39□□□□□ -1.23
PUP3YER094C YCL049CP25577 312 aa7.39□□□□□ -1.23
PUP3YER094C NTH1P32356 751 aa7.39□□□□□ -1.23
PUP3YER094C DOA1P36037 715 aa7.39□□□□□ -1.23
PUP3YER094C UTH1P36135 365 aa7.39□□□□□ -1.23
PUP3YER094C ATG14P38270 344 aa7.39□□□□□ -1.23
PUP3YER094C YHR177WP38867 453 aa7.39□□□□□ -1.23
PUP3YER094C QDR2P40474 542 aa7.39□□□□□ -1.23
PUP3YER094C AGP3P43548 558 aa7.39□□□□□ -1.23
PUP3YER094C IBA57P47158 497 aa7.39□□□□□ -1.23
PUP3YER094C RHO4Q00246 291 aa7.39□□□□□ -1.23
PUP3YER094C GIC2Q06648 383 aa7.39□□□□□ -1.23
PUP3YER094C LOT6Q07923 191 aa7.39□□□□□ -1.23
PUP3YER094C RRT8Q08219 342 aa7.39□□□□□ -1.23
PUP3YER094C MCA1Q08601 432 aa7.39□□□□□ -1.23
PUP3YER094C PUS7Q08647 676 aaKnown RBP7.39□□□□□ -1.23
PUP3YER094C GLO4Q12320 285 aa7.39□□□□□ -1.23
PUP3YER094C ACC1Q00955 2233 aaKnown RBP7.38□□□□□ -1.23
PUP3YER094C MF(ALPHA)1P01149 165 aa7.38□□□□□ -1.23
PUP3YER094C PUT2P07275 575 aa7.38□□□□□ -1.23
PUP3YER094C ZWF1P11412 505 aaKnown RBP7.38□□□□□ -1.23
PUP3YER094C DBP3P20447 523 aaKnown RBP7.38□□□□□ -1.23
PUP3YER094C GRR1P24814 1151 aa7.38□□□□□ -1.23
PUP3YER094C UBC8P28263 218 aa7.38□□□□□ -1.23
PUP3YER094C CDC12P32468 407 aaKnown RBP7.38□□□□□ -1.23
PUP3YER094C RIO2P40160 425 aaKnown RBP7.38□□□□□ -1.23
PUP3YER094C RIM21P48565 533 aa7.38□□□□□ -1.23
PUP3YER094C DCP2P53550 970 aaKnown RBP7.38□□□□□ -1.23
PUP3YER094C SED5Q01590 340 aa7.38□□□□□ -1.23
PUP3YER094C DIC1Q06143 298 aa7.38□□□□□ -1.23
PUP3YER094C SWA2Q06677 668 aa7.38□□□□□ -1.23
PUP3YER094C YLR030WQ07967 263 aa7.38□□□□□ -1.23
PUP3YER094C YTM1Q12024 460 aaPredicted RBP7.38□□□□□ -1.23
PUP3YER094C CAN1P04817 590 aa7.37□□□□□ -1.23
PUP3YER094C RPL17AP05740 184 aaKnown RBP7.37□□□□□ -1.23
PUP3YER094C RPS1BP23248 255 aaKnown RBP7.37□□□□□ -1.23
PUP3YER094C RER1P25560 188 aa7.37□□□□□ -1.23
PUP3YER094C APE2P32454 952 aaKnown RBP7.37□□□□□ -1.23
PUP3YER094C MKK1P32490 508 aa7.37□□□□□ -1.23
PUP3YER094C GDH2P33327 1092 aaKnown RBP7.37□□□□□ -1.23
PUP3YER094C LHP1P33399 275 aaKnown RBP7.37□□□□□ -1.23
PUP3YER094C NUF2P33895 451 aa7.37□□□□□ -1.23
PUP3YER094C TPA1P40032 644 aaKnown RBP7.37□□□□□ -1.23
PUP3YER094C PDS1P40316 373 aaPredicted RBP7.37□□□□□ -1.23
PUP3YER094C YJL068CP40363 299 aa7.37□□□□□ -1.23
PUP3YER094C RPL17BP46990 184 aaKnown RBP7.37□□□□□ -1.23
PUP3YER094C STE24P47154 453 aa7.37□□□□□ -1.23
PUP3YER094C ARI1P53111 347 aaKnown RBP7.37□□□□□ -1.23
PUP3YER094C CSL4P53859 292 aaPredicted RBP7.37□□□□□ -1.23
PUP3YER094C IGO1P53897 168 aa7.37□□□□□ -1.23
PUP3YER094C RRN5Q02983 363 aa7.37□□□□□ -1.23
PUP3YER094C YDR239CQ03780 787 aa7.37□□□□□ -1.23
PUP3YER094C SPO77Q06134 477 aa7.37□□□□□ -1.23
PUP3YER094C REH1Q06709 432 aa7.37□□□□□ -1.23
PUP3YER094C RSA1Q08932 381 aa7.37□□□□□ -1.23
PUP3YER094C SKS1Q12505 502 aa7.37□□□□□ -1.23
PUP3YER094C YKL033W-AQ86ZR7 236 aa7.37□□□□□ -1.23
PUP3YER094C PRP2P20095 876 aaPredicted RBP7.36□□□□□ -1.23
PUP3YER094C MRPL32P25348 183 aa7.36□□□□□ -1.23
PUP3YER094C POL4P25615 582 aa7.36□□□□□ -1.23
PUP3YER094C RIM101P33400 625 aa7.36□□□□□ -1.23
PUP3YER094C YRO2P38079 344 aa7.36□□□□□ -1.23
PUP3YER094C PRP39P39682 629 aaKnown RBP7.36□□□□□ -1.23
PUP3YER094C MPM1P40364 252 aa7.36□□□□□ -1.23
PUP3YER094C YFL066CP43538 392 aa7.36□□□□□ -1.23
PUP3YER094C FAR7P43592 221 aa7.36□□□□□ -1.23
PUP3YER094C BNA3P47039 444 aaKnown RBP7.36□□□□□ -1.23
PUP3YER094C CDH1P53197 566 aa7.36□□□□□ -1.23
PUP3YER094C YGR079WP53249 370 aa7.36□□□□□ -1.23
PUP3YER094C SIZ1Q04195 904 aa7.36□□□□□ -1.23
PUP3YER094C KRE28Q04431 385 aa7.36□□□□□ -1.23
PUP3YER094C DCI1Q08558 271 aa7.36□□□□□ -1.23
PUP3YER094C SFM1Q12314 213 aa7.36□□□□□ -1.23
PUP3YER094C SKM1Q12469 655 aa7.36□□□□□ -1.23
PUP3YER094C RHO1P06780 209 aaKnown RBP7.35□□□□□ -1.23
PUP3YER094C RPB5P20434 215 aa7.35□□□□□ -1.23
PUP3YER094C IMG1P25626 169 aa7.35□□□□□ -1.23
PUP3YER094C SSE2P32590 693 aaKnown RBP7.35□□□□□ -1.23
PUP3YER094C HCS1P34243 683 aa7.35□□□□□ -1.23
PUP3YER094C TEF4P36008 412 aaKnown RBP7.35□□□□□ -1.23
PUP3YER094C TUL1P36096 758 aa7.35□□□□□ -1.23
PUP3YER094C BIG1P38813 335 aa7.35□□□□□ -1.23
PUP3YER094C YRB2P40517 327 aa7.35□□□□□ -1.23
PUP3YER094C TED1P40533 473 aa7.35□□□□□ -1.23
PUP3YER094C CFD1P40558 293 aa7.35□□□□□ -1.23
PUP3YER094C YGR201CP42936 225 aa7.35□□□□□ -1.23
PUP3YER094C DUG1P43616 481 aaKnown RBP7.35□□□□□ -1.23
PUP3YER094C ALK1P43633 760 aaKnown RBP7.35□□□□□ -1.23
PUP3YER094C GPI8P49018 411 aa7.35□□□□□ -1.23
PUP3YER094C UBC9P50623 157 aaPredicted RBP7.35□□□□□ -1.23
PUP3YER094C HOS2P53096 452 aaPredicted RBP7.35□□□□□ -1.23
PUP3YER094C YMR310CQ04867 317 aaPredicted RBP7.35□□□□□ -1.23
PUP3YER094C ENT2Q05785 613 aa7.35□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms