RNA–Protein interactions for RNA: YER059W

PCL6, Transcript of Pho85p cyclin of the Pho80p subfamily, yeast

Gene PCL6, Length 1,263 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL6	YER059W	IMA4	P0CW41	589 aa		4.87	□□□□□ -1.63
PCL6	YER059W	YSC83	P32792	385 aa		4.87	□□□□□ -1.63
PCL6	YER059W	YBL028C	P38202	106 aa		4.87	□□□□□ -1.63
PCL6	YER059W	MTC4	P38335	694 aa	Known RBP	4.87	□□□□□ -1.63
PCL6	YER059W	GCD10	P41814	478 aa		4.87	□□□□□ -1.63
PCL6	YER059W	ADA2	Q02336	434 aa		4.87	□□□□□ -1.63
PCL6	YER059W	STD1	Q02794	444 aa		4.87	□□□□□ -1.63
PCL6	YER059W	IMA2	Q08295	589 aa		4.87	□□□□□ -1.63
PCL6	YER059W	PSY3	Q12318	242 aa		4.87	□□□□□ -1.63
PCL6	YER059W	RPL20A	P0CX23	172 aa	Known RBP	4.86	□□□□□ -1.63
PCL6	YER059W	RPL20B	P0CX24	172 aa	Predicted RBP	4.86	□□□□□ -1.63
PCL6	YER059W	SAM1	P10659	382 aa	Known RBP	4.86	□□□□□ -1.63
PCL6	YER059W	ATR1	P13090	542 aa		4.86	□□□□□ -1.63
PCL6	YER059W	PRP16	P15938	1071 aa	Predicted RBP	4.86	□□□□□ -1.63
PCL6	YER059W	CDC23	P16522	626 aa		4.86	□□□□□ -1.63
PCL6	YER059W	SAM2	P19358	384 aa	Known RBP	4.86	□□□□□ -1.63
PCL6	YER059W	PMU1	P36069	295 aa		4.86	□□□□□ -1.63
PCL6	YER059W	RTT107	P38850	1070 aa		4.86	□□□□□ -1.63
PCL6	YER059W	LAM5	P43560	674 aa		4.86	□□□□□ -1.63
PCL6	YER059W	RPA34	P47006	233 aa	Predicted RBP	4.86	□□□□□ -1.63
PCL6	YER059W	ARK1	P53974	638 aa		4.86	□□□□□ -1.63
PCL6	YER059W	HCR1	Q05775	265 aa	Known RBP	4.86	□□□□□ -1.63
PCL6	YER059W	PML1	Q07930	204 aa	Predicted RBP	4.86	□□□□□ -1.63
PCL6	YER059W	RMD5	Q12508	421 aa		4.86	□□□□□ -1.63
PCL6	YER059W	MRS3	P10566	314 aa		4.85	□□□□□ -1.63
PCL6	YER059W	SLM5	P25345	492 aa	Known RBP	4.85	□□□□□ -1.63
PCL6	YER059W	MST28	P39552	234 aa		4.85	□□□□□ -1.63
PCL6	YER059W	YJL070C	P40361	888 aa		4.85	□□□□□ -1.63
PCL6	YER059W	LSC1	P53598	329 aa	Known RBP	4.85	□□□□□ -1.63
PCL6	YER059W	CAF40	P53829	373 aa		4.85	□□□□□ -1.63
PCL6	YER059W	YNL143C	P53908	130 aa		4.85	□□□□□ -1.63
PCL6	YER059W	MPS1	P54199	764 aa		4.85	□□□□□ -1.63
PCL6	YER059W	YPL068C	Q02749	293 aa		4.85	□□□□□ -1.63
PCL6	YER059W	NUP53	Q03790	475 aa		4.85	□□□□□ -1.63
PCL6	YER059W	ERP1	Q05359	219 aa	Known RBP	4.85	□□□□□ -1.63
PCL6	YER059W	SNT309	Q06091	175 aa	Predicted RBP	4.85	□□□□□ -1.63
PCL6	YER059W	RRP9	Q06506	573 aa	Known RBP	4.85	□□□□□ -1.63
PCL6	YER059W	GRS2	Q06817	618 aa		4.85	□□□□□ -1.63
PCL6	YER059W	DAP1	Q12091	152 aa		4.85	□□□□□ -1.63
PCL6	YER059W	AYT1	Q12226	474 aa		4.85	□□□□□ -1.63
PCL6	YER059W	SET6	Q12529	373 aa		4.85	□□□□□ -1.63
PCL6	YER059W	RPL15A	P05748	204 aa	Known RBP	4.84	□□□□□ -1.63
PCL6	YER059W	SCH9	P11792	824 aa	Known RBP	4.84	□□□□□ -1.63
PCL6	YER059W	TAL1	P15019	335 aa	Known RBP	4.84	□□□□□ -1.63
PCL6	YER059W	SPO12	P17123	173 aa		4.84	□□□□□ -1.63
PCL6	YER059W	SEC1	P30619	724 aa	Known RBP	4.84	□□□□□ -1.63
PCL6	YER059W	ATP3	P38077	311 aa	Known RBP	4.84	□□□□□ -1.63
PCL6	YER059W	MMF1	P40185	145 aa	Known RBP	4.84	□□□□□ -1.63
PCL6	YER059W	RRT5	P43607	289 aa		4.84	□□□□□ -1.63
PCL6	YER059W	MDE1	P47095	244 aa		4.84	□□□□□ -1.63
PCL6	YER059W	RTT102	P53330	157 aa		4.84	□□□□□ -1.63
PCL6	YER059W	YNR068C	P53754	272 aa		4.84	□□□□□ -1.63
PCL6	YER059W	PDR16	P53860	351 aa	Known RBP	4.84	□□□□□ -1.63
PCL6	YER059W	REX3	Q12090	404 aa		4.84	□□□□□ -1.63
PCL6	YER059W	YUR1	P26725	428 aa		4.83	□□□□□ -1.64
PCL6	YER059W	RGT1	P32862	1170 aa		4.83	□□□□□ -1.64
PCL6	YER059W	SKN1	P33336	771 aa		4.83	□□□□□ -1.64
PCL6	YER059W	SPP381	P38282	291 aa	Predicted RBP	4.83	□□□□□ -1.64
PCL6	YER059W	STP2	P38704	541 aa		4.83	□□□□□ -1.64
PCL6	YER059W	RPH1	P39956	796 aa		4.83	□□□□□ -1.64
PCL6	YER059W	NAS2	P40555	220 aa		4.83	□□□□□ -1.64
PCL6	YER059W	YFR016C	P43597	1233 aa	Known RBP	4.83	□□□□□ -1.64
PCL6	YER059W	SPH1	Q06160	661 aa		4.83	□□□□□ -1.64
PCL6	YER059W	AAD15	Q08361	143 aa		4.83	□□□□□ -1.64
PCL6	YER059W	PUT3	P25502	979 aa	Predicted RBP	4.82	□□□□□ -1.64
PCL6	YER059W	RDS1	P25611	832 aa		4.82	□□□□□ -1.64
PCL6	YER059W	KKQ8	P36004	724 aa		4.82	□□□□□ -1.64
PCL6	YER059W	RIB5	P38145	238 aa		4.82	□□□□□ -1.64
PCL6	YER059W	RPR2	P40571	144 aa		4.82	□□□□□ -1.64
PCL6	YER059W	PRM1	P53835	661 aa		4.82	□□□□□ -1.64
PCL6	YER059W	ECM7	Q06200	448 aa		4.82	□□□□□ -1.64
PCL6	YER059W	SRL2	Q12020	392 aa		4.82	□□□□□ -1.64
PCL6	YER059W	RNH203	Q12338	110 aa		4.82	□□□□□ -1.64
PCL6	YER059W	SLY1	P22213	666 aa		4.81	□□□□□ -1.64
PCL6	YER059W	ITR1	P30605	584 aa		4.81	□□□□□ -1.64
PCL6	YER059W	ATS1	P31386	333 aa		4.81	□□□□□ -1.64
PCL6	YER059W	COX13	P32799	129 aa		4.81	□□□□□ -1.64
PCL6	YER059W	DOA1	P36037	715 aa		4.81	□□□□□ -1.64
PCL6	YER059W	DHH1	P39517	506 aa	Known RBP	4.81	□□□□□ -1.64
PCL6	YER059W	UTP6	Q02354	440 aa	Known RBP	4.81	□□□□□ -1.64
PCL6	YER059W	YMR181C	Q03231	154 aa		4.81	□□□□□ -1.64
PCL6	YER059W	PRP3	Q03338	469 aa	Predicted RBP	4.81	□□□□□ -1.64
PCL6	YER059W	URC2	Q04411	772 aa		4.81	□□□□□ -1.64
PCL6	YER059W	OPI3	P05375	206 aa		4.8	□□□□□ -1.64
PCL6	YER059W	STE3	P06783	470 aa		4.8	□□□□□ -1.64
PCL6	YER059W	ATP1	P07251	545 aa	Known RBP	4.8	□□□□□ -1.64
PCL6	YER059W	RPL12A	P0CX53	165 aa	Known RBP	4.8	□□□□□ -1.64
PCL6	YER059W	RPL12B	P0CX54	165 aa		4.8	□□□□□ -1.64
PCL6	YER059W	ARF1	P11076	181 aa	Known RBP	4.8	□□□□□ -1.64
PCL6	YER059W	NAT2	P37293	288 aa		4.8	□□□□□ -1.64
PCL6	YER059W	MDM31	P38880	579 aa		4.8	□□□□□ -1.64
PCL6	YER059W	EFM3	P47163	339 aa		4.8	□□□□□ -1.64
PCL6	YER059W	SHE4	P51534	789 aa		4.8	□□□□□ -1.64
PCL6	YER059W	MPS2	P53159	387 aa		4.8	□□□□□ -1.64
PCL6	YER059W	IBD2	P53892	351 aa		4.8	□□□□□ -1.64
PCL6	YER059W	RRB1	Q04225	511 aa	Known RBP	4.8	□□□□□ -1.64
PCL6	YER059W	MGR3	Q04472	501 aa		4.8	□□□□□ -1.64
PCL6	YER059W	CEX1	Q12453	761 aa		4.8	□□□□□ -1.64
PCL6	YER059W	RAD61	Q99359	647 aa		4.8	□□□□□ -1.64
PCL6	YER059W	SPS22	P25380	463 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms