RNA–Protein interactions for RNA: YDR247W

VHS1, Transcript of Cytoplasmic serine/threonine protein kinase, yeastyeast

Gene VHS1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS1YDR247W YMR030W-AQ3E760 96 aa5.32□□□□□ -1.56
VHS1YDR247W YPR089WO13585 888 aa5.31□□□□□ -1.56
VHS1YDR247W RHO2P06781 192 aa5.31□□□□□ -1.56
VHS1YDR247W ASP3-2P0CX77 362 aa5.31□□□□□ -1.56
VHS1YDR247W ASP3-3P0CX78 362 aa5.31□□□□□ -1.56
VHS1YDR247W ASP3-4P0CX79 362 aa5.31□□□□□ -1.56
VHS1YDR247W ASP3-1P0CZ17 362 aa5.31□□□□□ -1.56
VHS1YDR247W GCY1P14065 312 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
VHS1YDR247W BUD23P25627 275 aaPredicted RBP5.31□□□□□ -1.56
VHS1YDR247W TFB1P32776 642 aa5.31□□□□□ -1.56
VHS1YDR247W FRE1P32791 686 aa5.31□□□□□ -1.56
VHS1YDR247W ORC2P32833 620 aa5.31□□□□□ -1.56
VHS1YDR247W TVP38P36164 337 aa5.31□□□□□ -1.56
VHS1YDR247W VID24P38263 362 aa5.31□□□□□ -1.56
VHS1YDR247W ATG12P38316 186 aa5.31□□□□□ -1.56
VHS1YDR247W OTU2P38747 307 aaKnown RBP5.31□□□□□ -1.56
VHS1YDR247W STB2P46679 850 aa5.31□□□□□ -1.56
VHS1YDR247W YJL043WP47053 257 aa5.31□□□□□ -1.56
VHS1YDR247W YPR003CP53394 754 aa5.31□□□□□ -1.56
VHS1YDR247W DSL1P53847 754 aa5.31□□□□□ -1.56
VHS1YDR247W SED5Q01590 340 aa5.31□□□□□ -1.56
VHS1YDR247W GPI17Q04080 534 aa5.31□□□□□ -1.56
VHS1YDR247W GLO2Q05584 274 aa5.31□□□□□ -1.56
VHS1YDR247W YLR455WQ06188 304 aa5.31□□□□□ -1.56
VHS1YDR247W SEC10Q06245 871 aa5.31□□□□□ -1.56
VHS1YDR247W RAD34Q06665 692 aa5.31□□□□□ -1.56
VHS1YDR247W THI20Q08224 551 aa5.31□□□□□ -1.56
VHS1YDR247W PSY3Q12318 242 aa5.31□□□□□ -1.56
VHS1YDR247W IZH4Q99393 312 aa5.31□□□□□ -1.56
VHS1YDR247W ADE5,7P07244 802 aaKnown RBP5.3□□□□□ -1.56
VHS1YDR247W CBP1P07252 654 aa5.3□□□□□ -1.56
VHS1YDR247W DFR1P07807 211 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
VHS1YDR247W RPL4AP10664 362 aaKnown RBP5.3□□□□□ -1.56
VHS1YDR247W YMC1P32331 307 aa5.3□□□□□ -1.56
VHS1YDR247W AEP1P32493 518 aa5.3□□□□□ -1.56
VHS1YDR247W SRB2P34162 210 aa5.3□□□□□ -1.56
VHS1YDR247W MUM2P38236 366 aa5.3□□□□□ -1.56
VHS1YDR247W YBR285WP38354 144 aa5.3□□□□□ -1.56
VHS1YDR247W YEL057CP39983 233 aa5.3□□□□□ -1.56
VHS1YDR247W CTK2P46962 323 aa5.3□□□□□ -1.56
VHS1YDR247W DPB11P47027 764 aaPredicted RBP5.3□□□□□ -1.56
VHS1YDR247W EAF6P47128 113 aa5.3□□□□□ -1.56
VHS1YDR247W ASN2P49090 572 aaKnown RBP5.3□□□□□ -1.56
VHS1YDR247W RPL4BP49626 362 aaKnown RBP5.3□□□□□ -1.56
VHS1YDR247W DIA3P52290 468 aa5.3□□□□□ -1.56
VHS1YDR247W YMR155WQ03795 547 aa5.3□□□□□ -1.56
VHS1YDR247W ECM7Q06200 448 aa5.3□□□□□ -1.56
VHS1YDR247W YDL114WQ07530 308 aa5.3□□□□□ -1.56
VHS1YDR247W IRC10Q08118 586 aa5.3□□□□□ -1.56
VHS1YDR247W BUD7Q08754 746 aa5.3□□□□□ -1.56
VHS1YDR247W YOR389WQ08912 624 aa5.3□□□□□ -1.56
VHS1YDR247W YPL272CQ08984 517 aa5.3□□□□□ -1.56
VHS1YDR247W PNS1Q12412 539 aa5.3□□□□□ -1.56
VHS1YDR247W RHO1P06780 209 aaKnown RBP5.29□□□□□ -1.56
VHS1YDR247W ADH7P25377 361 aa5.29□□□□□ -1.56
VHS1YDR247W SPB1P25582 841 aaPredicted RBP5.29□□□□□ -1.56
VHS1YDR247W YCL068CP25593 260 aa5.29□□□□□ -1.56
VHS1YDR247W RIM1P32445 135 aaKnown RBP5.29□□□□□ -1.56
VHS1YDR247W DPH2P32461 534 aa5.29□□□□□ -1.56
VHS1YDR247W GSH1P32477 678 aa5.29□□□□□ -1.56
VHS1YDR247W VMA8P32610 256 aaKnown RBP5.29□□□□□ -1.56
VHS1YDR247W UTR4P32626 227 aa5.29□□□□□ -1.56
VHS1YDR247W PXA2P34230 853 aa5.29□□□□□ -1.56
VHS1YDR247W PTC1P35182 281 aa5.29□□□□□ -1.56
VHS1YDR247W MMS4P38257 691 aa5.29□□□□□ -1.56
VHS1YDR247W GOS1P38736 223 aa5.29□□□□□ -1.56
VHS1YDR247W SHC1P39000 512 aa5.29□□□□□ -1.56
VHS1YDR247W CCT6P39079 546 aa5.29□□□□□ -1.56
VHS1YDR247W FAA2P39518 744 aa5.29□□□□□ -1.56
VHS1YDR247W UIP3P39547 235 aa5.29□□□□□ -1.56
VHS1YDR247W SEO1P39709 593 aa5.29□□□□□ -1.56
VHS1YDR247W AVT2P39981 480 aa5.29□□□□□ -1.56
VHS1YDR247W AVT6P40074 448 aa5.29□□□□□ -1.56
VHS1YDR247W YIL166CP40445 542 aa5.29□□□□□ -1.56
VHS1YDR247W MET18P40469 1032 aa5.29□□□□□ -1.56
VHS1YDR247W PKP1P40530 394 aa5.29□□□□□ -1.56
VHS1YDR247W MET28P40573 187 aa5.29□□□□□ -1.56
VHS1YDR247W AZR1P50080 613 aa5.29□□□□□ -1.56
VHS1YDR247W GPI1P53306 609 aa5.29□□□□□ -1.56
VHS1YDR247W BUD32P53323 261 aa5.29□□□□□ -1.56
VHS1YDR247W CIK1Q01649 594 aa5.29□□□□□ -1.56
VHS1YDR247W SLD5Q03406 294 aa5.29□□□□□ -1.56
VHS1YDR247W LOT6Q07923 191 aa5.29□□□□□ -1.56
VHS1YDR247W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
VHS1YDR247W INP53Q12271 1107 aa5.29□□□□□ -1.56
VHS1YDR247W BRR1Q99177 341 aaPredicted RBP5.29□□□□□ -1.56
VHS1YDR247W ATP6P00854 259 aa5.29□□□□□ -1.56
VHS1YDR247W AQY1P0CD91 305 aa5.29□□□□□ -1.56
VHS1YDR247W GCN3P14741 305 aa5.29□□□□□ -1.56
VHS1YDR247W POL30P15873 258 aaKnown RBP5.29□□□□□ -1.56
VHS1YDR247W HPR1P17629 752 aaKnown RBP5.29□□□□□ -1.56
VHS1YDR247W ITR2P30606 609 aa5.29□□□□□ -1.56
VHS1YDR247W ATP7P30902 174 aa5.29□□□□□ -1.56
VHS1YDR247W CYS4P32582 507 aaKnown RBP5.29□□□□□ -1.56
VHS1YDR247W ARN1P38731 627 aa5.29□□□□□ -1.56
VHS1YDR247W LSM5P40089 93 aaKnown RBP5.29□□□□□ -1.56
VHS1YDR247W SYG1P40528 902 aa5.29□□□□□ -1.56
VHS1YDR247W YFR020WP43600 232 aa5.29□□□□□ -1.56
VHS1YDR247W RRT5P43607 289 aa5.29□□□□□ -1.56
VHS1YDR247W ROK1P45818 564 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms