RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	AFG3	P39925	761 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	EAF5	P39995	279 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	CIN1	P40987	1014 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	PYK2	P52489	506 aa	Known RBP	4.14	□□□□□ -1.75
UPC2	YDR213W	EFM5	P53200	248 aa	Known RBP	4.14	□□□□□ -1.75
UPC2	YDR213W	PEF1	P53238	335 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	YGR168C	P53293	376 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	TGL2	P54857	326 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	EFR3	Q03653	782 aa	Known RBP	4.14	□□□□□ -1.75
UPC2	YDR213W	EMI1	Q04406	187 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	HDA2	Q06629	674 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	RAD34	Q06665	692 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	FMP25	Q08023	583 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	YPL066W	Q12194	479 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	RKM5	Q12367	367 aa		4.14	□□□□□ -1.75
UPC2	YDR213W	SAM35	P14693	329 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	NCP1	P16603	691 aa	Known RBP	4.13	□□□□□ -1.75
UPC2	YDR213W	RPA135	P22138	1203 aa	Known RBP	4.13	□□□□□ -1.75
UPC2	YDR213W	MRPL40	P36534	297 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	NOP4	P37838	685 aa	Known RBP	4.13	□□□□□ -1.75
UPC2	YDR213W	ARP1	P38696	384 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	ERV46	P39727	415 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	PAM16	P42949	149 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	VPS73	P53142	486 aa	Known RBP	4.13	□□□□□ -1.75
UPC2	YDR213W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
UPC2	YDR213W	YNR068C	P53754	272 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	SRP1	Q02821	542 aa	Known RBP	4.13	□□□□□ -1.75
UPC2	YDR213W	TRS31	Q03337	283 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	VHS1	Q03785	461 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	SIZ1	Q04195	904 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	ARV1	Q06541	321 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	MLH3	Q12083	715 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	WTM1	Q12363	437 aa	Known RBP	4.13	□□□□□ -1.75
UPC2	YDR213W	DGK1	Q12382	290 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	YHR213W-A	Q8TGT4	77 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	RIB3	Q99258	208 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	HKR1	P41809	1802 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	RPS9A	O13516	197 aa	Known RBP	4.13	□□□□□ -1.75
UPC2	YDR213W	CBP2	P03874	630 aa	Predicted RBP	4.13	□□□□□ -1.75
UPC2	YDR213W	RPC40	P07703	335 aa	Known RBP	4.13	□□□□□ -1.75
UPC2	YDR213W	ASP3-2	P0CX77	362 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	ASP3-3	P0CX78	362 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	ASP3-4	P0CX79	362 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	ASP3-1	P0CZ17	362 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	TRX2	P22803	104 aa	Known RBP	4.13	□□□□□ -1.75
UPC2	YDR213W	YUR1	P26725	428 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	NDC1	P32500	655 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	MRPL36	P36531	177 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	CDS1	P38221	457 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	AIM3	P38266	947 aa	Known RBP	4.13	□□□□□ -1.75
UPC2	YDR213W	EFM1	P38732	585 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	HXT9	P40885	567 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	IDP3	P53982	420 aa	Known RBP	4.13	□□□□□ -1.75
UPC2	YDR213W	YMR279C	Q03263	540 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	GOT1	Q03554	138 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	NSE5	Q03718	556 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	SNX41	Q04053	625 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	JLP1	Q12358	412 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	ISN1	Q99312	450 aa		4.13	□□□□□ -1.75
UPC2	YDR213W	HIS5	P07172	385 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	AMD1	P15274	810 aa	Known RBP	4.12	□□□□□ -1.75
UPC2	YDR213W	RER1	P25560	188 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	SYP1	P25623	870 aa	Known RBP	4.12	□□□□□ -1.75
UPC2	YDR213W	CAM1	P29547	415 aa	Known RBP	4.12	□□□□□ -1.75
UPC2	YDR213W	DBF20	P32328	564 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	RIM1	P32445	135 aa	Known RBP	4.12	□□□□□ -1.75
UPC2	YDR213W	PDR3	P33200	976 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	SKT5	P34226	696 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	MUP3	P38734	546 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	MBP1	P39678	833 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	YEL028W	P39989	153 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	ZRG8	P40021	1076 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	MEP2	P41948	499 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	YJR115W	P47152	169 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	HMS2	P47175	358 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	ALT1	P52893	592 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	YDR541C	Q03049	344 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	YMR034C	Q05131	434 aa	Predicted RBP	4.12	□□□□□ -1.75
UPC2	YDR213W	PHO92	Q06390	306 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	YLR352W	Q06479	807 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	YDL121C	Q07541	149 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	ACK1	Q07622	623 aa	Predicted RBP	4.12	□□□□□ -1.75
UPC2	YDR213W	SKI7	Q08491	747 aa	Predicted RBP	4.12	□□□□□ -1.75
UPC2	YDR213W	CLP1	Q08685	445 aa	Predicted RBP	4.12	□□□□□ -1.75
UPC2	YDR213W	YOR289W	Q12012	251 aa	Predicted RBP	4.12	□□□□□ -1.75
UPC2	YDR213W	YGR161W-C	Q3E744	92 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	MDM12	Q92328	271 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	HRP1	Q99383	534 aa	Known RBP	4.12	□□□□□ -1.75
UPC2	YDR213W	NAR1	P23503	491 aa	Known RBP	4.12	□□□□□ -1.75
UPC2	YDR213W	YCR102C	P25608	368 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	YCR099C	P25657	155 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	NTH1	P32356	751 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	ATP11	P32453	318 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	ECM25	P32525	599 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	YBL010C	P32788	280 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	ALG3	P38179	458 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	LAG1	P38703	411 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	MSS4	P38994	779 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	LYS9	P38999	446 aa		4.12	□□□□□ -1.75
UPC2	YDR213W	NSE4	P43124	402 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms