RNA–Protein interactions for RNA: YDR087C

RRP1, Transcript of Essential evolutionarily conserved nucleolar protein, yeast

Gene RRP1, Length 837 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP1	YDR087C	CHS6	P40955	746 aa		4.93	□□□□□ -1.62
RRP1	YDR087C	YFL067W	P43537	175 aa		4.93	□□□□□ -1.62
RRP1	YDR087C	PPM1	Q04081	328 aa		4.93	□□□□□ -1.62
RRP1	YDR087C	YDR341C	Q05506	607 aa	Known RBP	4.93	□□□□□ -1.62
RRP1	YDR087C	RPL1A	P0CX43	217 aa	Known RBP	4.92	□□□□□ -1.62
RRP1	YDR087C	RPL1B	P0CX44	217 aa	Known RBP	4.92	□□□□□ -1.62
RRP1	YDR087C	STP2	P38704	541 aa		4.92	□□□□□ -1.62
RRP1	YDR087C	PCF11	P39081	626 aa	Predicted RBP	4.92	□□□□□ -1.62
RRP1	YDR087C	AZR1	P50080	613 aa		4.92	□□□□□ -1.62
RRP1	YDR087C	SNX3	Q08826	162 aa	Known RBP	4.92	□□□□□ -1.62
RRP1	YDR087C	YLR108C	Q12259	485 aa		4.92	□□□□□ -1.62
RRP1	YDR087C	RRP7	P25368	297 aa	Predicted RBP	4.91	□□□□□ -1.62
RRP1	YDR087C	GPI16	P38875	610 aa		4.91	□□□□□ -1.62
RRP1	YDR087C	YPI1	P43587	155 aa		4.91	□□□□□ -1.62
RRP1	YDR087C	TOF1	P53840	1238 aa		4.91	□□□□□ -1.62
RRP1	YDR087C	ELP3	Q02908	557 aa	Known RBP	4.91	□□□□□ -1.62
RRP1	YDR087C	YOR387C	Q08910	206 aa		4.91	□□□□□ -1.62
RRP1	YDR087C	RIM1	P32445	135 aa	Known RBP	4.9	□□□□□ -1.63
RRP1	YDR087C	OLA1	P38219	394 aa	Known RBP	4.9	□□□□□ -1.63
RRP1	YDR087C	MTC6	P38849	526 aa		4.9	□□□□□ -1.63
RRP1	YDR087C	SIM1	P40472	476 aa		4.9	□□□□□ -1.63
RRP1	YDR087C	PRM5	P40476	318 aa		4.9	□□□□□ -1.63
RRP1	YDR087C	MTM1	P53320	366 aa		4.9	□□□□□ -1.63
RRP1	YDR087C	RRN11	Q04712	507 aa		4.9	□□□□□ -1.63
RRP1	YDR087C	PBA1	Q05778	276 aa		4.9	□□□□□ -1.63
RRP1	YDR087C	MRPL35	Q06678	367 aa		4.9	□□□□□ -1.63
RRP1	YDR087C	TSR1	Q07381	788 aa	Known RBP	4.9	□□□□□ -1.63
RRP1	YDR087C	TMS1	Q12116	473 aa		4.9	□□□□□ -1.63
RRP1	YDR087C	SPA2	P23201	1466 aa	Known RBP	4.89	□□□□□ -1.63
RRP1	YDR087C	SWR1	Q05471	1514 aa		4.89	□□□□□ -1.63
RRP1	YDR087C	SPT15	P13393	240 aa	Known RBP	4.89	□□□□□ -1.63
RRP1	YDR087C	ALG1	P16661	449 aa		4.89	□□□□□ -1.63
RRP1	YDR087C	NAM9	P27929	486 aa		4.89	□□□□□ -1.63
RRP1	YDR087C	SPG5	P42933	373 aa		4.89	□□□□□ -1.63
RRP1	YDR087C	NCA3	P46955	337 aa		4.89	□□□□□ -1.63
RRP1	YDR087C	YJL055W	P47044	245 aa		4.89	□□□□□ -1.63
RRP1	YDR087C	RRP9	Q06506	573 aa	Known RBP	4.89	□□□□□ -1.63
RRP1	YDR087C	CYC3	P06182	269 aa		4.88	□□□□□ -1.63
RRP1	YDR087C	MDL1	P33310	695 aa		4.88	□□□□□ -1.63
RRP1	YDR087C	YKL097C	P34245	136 aa		4.88	□□□□□ -1.63
RRP1	YDR087C	JLP2	P40206	208 aa		4.88	□□□□□ -1.63
RRP1	YDR087C	JEM1	P40358	645 aa		4.88	□□□□□ -1.63
RRP1	YDR087C	REE1	P40893	198 aa		4.88	□□□□□ -1.63
RRP1	YDR087C	SCW10	Q04951	389 aa		4.88	□□□□□ -1.63
RRP1	YDR087C	BCH1	Q05029	724 aa		4.88	□□□□□ -1.63
RRP1	YDR087C	RUP1	Q12242	671 aa		4.88	□□□□□ -1.63
RRP1	YDR087C	CYS4	P32582	507 aa	Known RBP	4.87	□□□□□ -1.63
RRP1	YDR087C	SDH3	P33421	198 aa		4.87	□□□□□ -1.63
RRP1	YDR087C	GDI1	P39958	451 aa	Known RBP	4.87	□□□□□ -1.63
RRP1	YDR087C	WWM1	P43582	211 aa	Known RBP	4.87	□□□□□ -1.63
RRP1	YDR087C	SFH5	P47008	294 aa		4.87	□□□□□ -1.63
RRP1	YDR087C	STD1	Q02794	444 aa		4.87	□□□□□ -1.63
RRP1	YDR087C	NDL1	Q06568	189 aa		4.87	□□□□□ -1.63
RRP1	YDR087C	TRP1	P00912	224 aa		4.86	□□□□□ -1.63
RRP1	YDR087C	HSP82	P02829	709 aa	Known RBP	4.86	□□□□□ -1.63
RRP1	YDR087C	HSP104	P31539	908 aa	Known RBP	4.86	□□□□□ -1.63
RRP1	YDR087C	MUD1	P32605	298 aa	Known RBP	4.86	□□□□□ -1.63
RRP1	YDR087C	YBL059W	P34224	193 aa		4.86	□□□□□ -1.63
RRP1	YDR087C	NDT80	P38830	627 aa		4.86	□□□□□ -1.63
RRP1	YDR087C	RHO5	P53879	331 aa	Known RBP	4.86	□□□□□ -1.63
RRP1	YDR087C	SXM1	Q04175	944 aa	Known RBP	4.86	□□□□□ -1.63
RRP1	YDR087C	HHF1	P02309	103 aa	Known RBP	4.85	□□□□□ -1.63
RRP1	YDR087C	RPS8A	P0CX39	200 aa	Known RBP	4.85	□□□□□ -1.63
RRP1	YDR087C	RPS8B	P0CX40	200 aa	Known RBP	4.85	□□□□□ -1.63
RRP1	YDR087C	KAR9	P32526	644 aa		4.85	□□□□□ -1.63
RRP1	YDR087C	INM1	P38710	295 aa		4.85	□□□□□ -1.63
RRP1	YDR087C	MLH1	P38920	769 aa		4.85	□□□□□ -1.63
RRP1	YDR087C	SEC28	P40509	296 aa	Known RBP	4.85	□□□□□ -1.63
RRP1	YDR087C	MEH1	Q02205	184 aa		4.85	□□□□□ -1.63
RRP1	YDR087C	MMT1	Q03218	510 aa		4.85	□□□□□ -1.63
RRP1	YDR087C	SMA2	Q04658	369 aa		4.85	□□□□□ -1.63
RRP1	YDR087C	NSE1	Q07913	336 aa		4.85	□□□□□ -1.63
RRP1	YDR087C	TPT1	Q12272	230 aa	Known RBP	4.85	□□□□□ -1.63
RRP1	YDR087C	DEG1	P31115	442 aa	Known RBP	4.84	□□□□□ -1.63
RRP1	YDR087C	PUP2	P32379	260 aa		4.84	□□□□□ -1.63
RRP1	YDR087C	MSG5	P38590	489 aa		4.84	□□□□□ -1.63
RRP1	YDR087C	PIB2	P53191	635 aa		4.84	□□□□□ -1.63
RRP1	YDR087C	HER2	Q03557	464 aa		4.84	□□□□□ -1.63
RRP1	YDR087C	RNH203	Q12338	110 aa		4.84	□□□□□ -1.63
RRP1	YDR087C	DST1	P07273	309 aa		4.83	□□□□□ -1.64
RRP1	YDR087C	NFT1	P0CE68	1218 aa		4.83	□□□□□ -1.64
RRP1	YDR087C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
RRP1	YDR087C	YBR056W	P38081	501 aa		4.83	□□□□□ -1.64
RRP1	YDR087C	QDR3	P38227	689 aa		4.83	□□□□□ -1.64
RRP1	YDR087C	YER079W	P40052	210 aa	Known RBP	4.83	□□□□□ -1.64
RRP1	YDR087C	ROG1	P53118	685 aa		4.83	□□□□□ -1.64
RRP1	YDR087C	COS1	P53822	381 aa		4.83	□□□□□ -1.64
RRP1	YDR087C	RAX1	Q08760	435 aa		4.83	□□□□□ -1.64
RRP1	YDR087C	RSA1	Q08932	381 aa		4.83	□□□□□ -1.64
RRP1	YDR087C	CDC21	P06785	304 aa		4.82	□□□□□ -1.64
RRP1	YDR087C	YCL068C	P25593	260 aa		4.82	□□□□□ -1.64
RRP1	YDR087C	ARO2	P28777	376 aa	Known RBP	4.82	□□□□□ -1.64
RRP1	YDR087C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
RRP1	YDR087C	CHK1	P38147	527 aa		4.82	□□□□□ -1.64
RRP1	YDR087C	PFF1	P38244	976 aa		4.82	□□□□□ -1.64
RRP1	YDR087C	RXT2	P38255	430 aa		4.82	□□□□□ -1.64
RRP1	YDR087C	PTH1	P38876	190 aa	Known RBP	4.82	□□□□□ -1.64
RRP1	YDR087C	BRO1	P48582	844 aa		4.82	□□□□□ -1.64
RRP1	YDR087C	TOS2	P50078	622 aa		4.82	□□□□□ -1.64
RRP1	YDR087C	PEX25	Q02969	394 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms