RNA–Protein interactions for RNA: YDL146W

LDB17, Transcript of Protein involved in the regulation of endocytosis, yeast

Gene LDB17, Length 1,476 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDB17	YDL146W	QDR3	P38227	689 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	SPG5	P42933	373 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	BNA6	P43619	295 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	TOS3	P43637	560 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	LOH1	P47055	219 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	BIO3	P50277	480 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	EFM5	P53200	248 aa	Known RBP	4.56	□□□□□ -1.68
LDB17	YDL146W	RSM23	Q01163	450 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	ORM2	Q06144	216 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	DIB1	Q06819	143 aa	Predicted RBP	4.56	□□□□□ -1.68
LDB17	YDL146W	YDL057W	Q07379	328 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	GEP3	Q08622	556 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	RPS10A	Q08745	105 aa	Predicted RBP	4.56	□□□□□ -1.68
LDB17	YDL146W	RUP1	Q12242	671 aa		4.56	□□□□□ -1.68
LDB17	YDL146W	PAA1	Q12447	191 aa	Known RBP	4.56	□□□□□ -1.68
LDB17	YDL146W	CFT1	Q06632	1357 aa	Known RBP	4.55	□□□□□ -1.68
LDB17	YDL146W	PEP4	P07267	405 aa	Known RBP	4.55	□□□□□ -1.68
LDB17	YDL146W	ATP10	P18496	279 aa		4.55	□□□□□ -1.68
LDB17	YDL146W	RPL5	P26321	297 aa	Known RBP	4.55	□□□□□ -1.68
LDB17	YDL146W	GSY2	P27472	705 aa		4.55	□□□□□ -1.68
LDB17	YDL146W	ICL1	P28240	557 aa	Predicted RBP	4.55	□□□□□ -1.68
LDB17	YDL146W	PRO3	P32263	286 aa	Known RBP	4.55	□□□□□ -1.68
LDB17	YDL146W	SRB4	P32569	687 aa		4.55	□□□□□ -1.68
LDB17	YDL146W	FRE1	P32791	686 aa		4.55	□□□□□ -1.68
LDB17	YDL146W	RPC25	P35718	212 aa		4.55	□□□□□ -1.68
LDB17	YDL146W	ANS1	P38832	159 aa		4.55	□□□□□ -1.68
LDB17	YDL146W	PCF11	P39081	626 aa	Predicted RBP	4.55	□□□□□ -1.68
LDB17	YDL146W	PRP39	P39682	629 aa	Known RBP	4.55	□□□□□ -1.68
LDB17	YDL146W	YRB2	P40517	327 aa		4.55	□□□□□ -1.68
LDB17	YDL146W	YIR014W	P40570	242 aa		4.55	□□□□□ -1.68
LDB17	YDL146W	PAC11	P40960	533 aa		4.55	□□□□□ -1.68
LDB17	YDL146W	CDC40	P40968	455 aa	Predicted RBP	4.55	□□□□□ -1.68
LDB17	YDL146W	TFG2	P41896	400 aa	Predicted RBP	4.55	□□□□□ -1.68
LDB17	YDL146W	OTU1	P43558	301 aa		4.55	□□□□□ -1.68
LDB17	YDL146W	ATP23	P53722	227 aa		4.55	□□□□□ -1.68
LDB17	YDL146W	YNL260C	P53846	198 aa		4.55	□□□□□ -1.68
LDB17	YDL146W	KTR5	P53966	522 aa	Predicted RBP	4.55	□□□□□ -1.68
LDB17	YDL146W	PNG1	Q02890	363 aa		4.55	□□□□□ -1.68
LDB17	YDL146W	RSN1	Q03516	953 aa		4.55	□□□□□ -1.68
LDB17	YDL146W	THP1	Q08231	455 aa		4.55	□□□□□ -1.68
LDB17	YDL146W	BTS1	Q12051	335 aa		4.55	□□□□□ -1.68
LDB17	YDL146W	AHA1	Q12449	350 aa	Known RBP	4.55	□□□□□ -1.68
LDB17	YDL146W	RMD5	Q12508	421 aa		4.55	□□□□□ -1.68
LDB17	YDL146W	BRR1	Q99177	341 aa	Predicted RBP	4.55	□□□□□ -1.68
LDB17	YDL146W	SEC63	P14906	663 aa		4.54	□□□□□ -1.68
LDB17	YDL146W	CNA1	P23287	553 aa		4.54	□□□□□ -1.68
LDB17	YDL146W	PTC6	P25646	442 aa		4.54	□□□□□ -1.68
LDB17	YDL146W	CYM1	P32898	989 aa		4.54	□□□□□ -1.68
LDB17	YDL146W	ECT1	P33412	323 aa		4.54	□□□□□ -1.68
LDB17	YDL146W	MTR2	P34232	184 aa	Known RBP	4.54	□□□□□ -1.68
LDB17	YDL146W	YHR122W	P38829	231 aa		4.54	□□□□□ -1.68
LDB17	YDL146W	GAT2	P40209	560 aa		4.54	□□□□□ -1.68
LDB17	YDL146W	RPS10B	P46784	105 aa	Known RBP	4.54	□□□□□ -1.68
LDB17	YDL146W	RGT2	Q12300	763 aa		4.54	□□□□□ -1.68
LDB17	YDL146W	GLE1	Q12315	538 aa		4.54	□□□□□ -1.68
LDB17	YDL146W	YDR262W	Q12331	272 aa		4.54	□□□□□ -1.68
LDB17	YDL146W	SPO24	Q3E752	67 aa		4.54	□□□□□ -1.68
LDB17	YDL146W	RAP1	P11938	827 aa		4.53	□□□□□ -1.68
LDB17	YDL146W	YCR016W	P25617	290 aa	Known RBP	4.53	□□□□□ -1.68
LDB17	YDL146W	SOR1	P35497	357 aa	Known RBP	4.53	□□□□□ -1.68
LDB17	YDL146W	RTC2	P38279	296 aa		4.53	□□□□□ -1.68
LDB17	YDL146W	YMR262W	P38430	313 aa		4.53	□□□□□ -1.68
LDB17	YDL146W	YHR177W	P38867	453 aa		4.53	□□□□□ -1.68
LDB17	YDL146W	SNL1	P40548	159 aa		4.53	□□□□□ -1.68
LDB17	YDL146W	YGR117C	P53270	476 aa		4.53	□□□□□ -1.68
LDB17	YDL146W	SYO1	Q07395	620 aa		4.53	□□□□□ -1.68
LDB17	YDL146W	SOR2	Q07786	357 aa		4.53	□□□□□ -1.68
LDB17	YDL146W	BSC6	Q08280	497 aa		4.53	□□□□□ -1.68
LDB17	YDL146W	NCE102	Q12207	173 aa	RIP-Chip data	4.53	□□□□□ -1.68	not detected
LDB17	YDL146W	LSP1	Q12230	341 aa	Known RBP	4.53	□□□□□ -1.68
LDB17	YDL146W	RDL1	Q12305	139 aa	Known RBP	4.53	□□□□□ -1.68
LDB17	YDL146W	APC2	Q12440	853 aa		4.53	□□□□□ -1.68
LDB17	YDL146W	RTC1	Q08281	1341 aa		4.52	□□□□□ -1.69
LDB17	YDL146W	MSF1	P08425	469 aa		4.52	□□□□□ -1.69
LDB17	YDL146W	RPL18A	P0CX49	186 aa	Known RBP	4.52	□□□□□ -1.69
LDB17	YDL146W	RPL18B	P0CX50	186 aa	Known RBP	4.52	□□□□□ -1.69
LDB17	YDL146W	DAL81	P21657	970 aa		4.52	□□□□□ -1.69
LDB17	YDL146W	DAL2	P25335	343 aa		4.52	□□□□□ -1.69
LDB17	YDL146W	RVS161	P25343	265 aa	Known RBP	4.52	□□□□□ -1.69
LDB17	YDL146W	PRP21	P32524	280 aa	Predicted RBP	4.52	□□□□□ -1.69
LDB17	YDL146W	SPT10	P35208	640 aa		4.52	□□□□□ -1.69
LDB17	YDL146W	YKL023W	P36103	277 aa	Known RBP	4.52	□□□□□ -1.69
LDB17	YDL146W	TCM62	P38228	572 aa	Known RBP	4.52	□□□□□ -1.69
LDB17	YDL146W	INM1	P38710	295 aa		4.52	□□□□□ -1.69
LDB17	YDL146W	SHR3	Q02774	210 aa		4.52	□□□□□ -1.69
LDB17	YDL146W	TAF12	Q03761	539 aa		4.52	□□□□□ -1.69
LDB17	YDL146W	PKH2	Q12236	1081 aa	Known RBP	4.52	□□□□□ -1.69
LDB17	YDL146W	FRE7	Q12333	620 aa		4.52	□□□□□ -1.69
LDB17	YDL146W	RRP12	Q12754	1228 aa	Known RBP	4.52	□□□□□ -1.69
LDB17	YDL146W	CHO1	P08456	276 aa		4.51	□□□□□ -1.69
LDB17	YDL146W	YLL053C	P0CD98	152 aa		4.51	□□□□□ -1.69
LDB17	YDL146W	MRP2	P10663	115 aa	Predicted RBP	4.51	□□□□□ -1.69
LDB17	YDL146W	HXT1	P32465	570 aa		4.51	□□□□□ -1.69
LDB17	YDL146W	REC114	P32841	428 aa		4.51	□□□□□ -1.69
LDB17	YDL146W	RGT1	P32862	1170 aa		4.51	□□□□□ -1.69
LDB17	YDL146W	IMP3	P32899	183 aa	Predicted RBP	4.51	□□□□□ -1.69
LDB17	YDL146W	YKL071W	P36086	256 aa		4.51	□□□□□ -1.69
LDB17	YDL146W	STV1	P37296	890 aa		4.51	□□□□□ -1.69
LDB17	YDL146W	BNA4	P38169	460 aa		4.51	□□□□□ -1.69
LDB17	YDL146W	IML3	P38265	245 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms