RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W CAR2P07991 424 aaKnown RBP2.05□□□□□ -2.08
UBP1YDL122W MET2P08465 486 aa2.05□□□□□ -2.08
UBP1YDL122W YPK1P12688 680 aaKnown RBP2.05□□□□□ -2.08
UBP1YDL122W VPS33P20795 691 aa2.05□□□□□ -2.08
UBP1YDL122W DBF2P22204 572 aa2.05□□□□□ -2.08
UBP1YDL122W CDC20P26309 610 aa2.05□□□□□ -2.08
UBP1YDL122W PRE2P30656 287 aaKnown RBP2.05□□□□□ -2.08
UBP1YDL122W DCG1P32460 244 aa2.05□□□□□ -2.08
UBP1YDL122W SRO77P38163 1010 aa2.05□□□□□ -2.08
UBP1YDL122W YMR262WP38430 313 aa2.05□□□□□ -2.08
UBP1YDL122W RPP1P38786 293 aa2.05□□□□□ -2.08
UBP1YDL122W LYS9P38999 446 aa2.05□□□□□ -2.08
UBP1YDL122W GDI1P39958 451 aaKnown RBP2.05□□□□□ -2.08
UBP1YDL122W GET2P40056 285 aa2.05□□□□□ -2.08
UBP1YDL122W PFK26P40433 827 aaKnown RBP2.05□□□□□ -2.08
UBP1YDL122W RPS0BP46654 252 aaKnown RBP2.05□□□□□ -2.08
UBP1YDL122W GLO1P50107 326 aa2.05□□□□□ -2.08
UBP1YDL122W PRP38Q00723 242 aaPredicted RBP2.05□□□□□ -2.08
UBP1YDL122W YLR345WQ06137 509 aa2.05□□□□□ -2.08
UBP1YDL122W RXT3Q07458 294 aa2.05□□□□□ -2.08
UBP1YDL122W SMF3Q12078 473 aaPredicted RBP2.05□□□□□ -2.08
UBP1YDL122W PAR32Q12515 295 aaKnown RBP2.05□□□□□ -2.08
UBP1YDL122W BLM10P43583 2143 aa2.04□□□□□ -2.08
UBP1YDL122W CDC6P09119 513 aa2.04□□□□□ -2.08
UBP1YDL122W RNA1P11745 407 aaKnown RBP2.04□□□□□ -2.08
UBP1YDL122W CLB3P24870 427 aa2.04□□□□□ -2.08
UBP1YDL122W STE50P25344 346 aa2.04□□□□□ -2.08
UBP1YDL122W RPT5P33297 434 aaKnown RBP2.04□□□□□ -2.08
UBP1YDL122W SRB2P34162 210 aa2.04□□□□□ -2.08
UBP1YDL122W COS111P38308 924 aa2.04□□□□□ -2.08
UBP1YDL122W MTC4P38335 694 aaKnown RBP2.04□□□□□ -2.08
UBP1YDL122W YJL193WP39542 402 aa2.04□□□□□ -2.08
UBP1YDL122W VPS52P39904 641 aa2.04□□□□□ -2.08
UBP1YDL122W GIM4P40005 111 aaKnown RBP2.04□□□□□ -2.08
UBP1YDL122W MEP1P40260 492 aa2.04□□□□□ -2.08
UBP1YDL122W YIL077CP40508 320 aa2.04□□□□□ -2.08
UBP1YDL122W SEC28P40509 296 aaKnown RBP2.04□□□□□ -2.08
UBP1YDL122W YJL055WP47044 245 aa2.04□□□□□ -2.08
UBP1YDL122W IBA57P47158 497 aa2.04□□□□□ -2.08
UBP1YDL122W TOM22P49334 152 aa2.04□□□□□ -2.08
UBP1YDL122W HOP2P53187 214 aa2.04□□□□□ -2.08
UBP1YDL122W TRM12Q04235 462 aa2.04□□□□□ -2.08
UBP1YDL122W GFD1Q04839 188 aaKnown RBP2.04□□□□□ -2.08
UBP1YDL122W HOF1Q05080 669 aa2.04□□□□□ -2.08
UBP1YDL122W YMR034CQ05131 434 aaPredicted RBP2.04□□□□□ -2.08
UBP1YDL122W YPL191CQ08930 360 aa2.04□□□□□ -2.08
UBP1YDL122W VCX1Q99385 411 aa2.04□□□□□ -2.08
UBP1YDL122W UBR1P19812 1950 aa2.04□□□□□ -2.08
UBP1YDL122W STF1P01098 86 aa2.03□□□□□ -2.08
UBP1YDL122W CDC39P25655 2108 aaKnown RBP2.03□□□□□ -2.08
UBP1YDL122W RPN2P32565 945 aaKnown RBP2.03□□□□□ -2.08
UBP1YDL122W YME1P32795 747 aa2.03□□□□□ -2.08
UBP1YDL122W STB6P36085 766 aa2.03□□□□□ -2.08
UBP1YDL122W TDA11P38854 504 aa2.03□□□□□ -2.08
UBP1YDL122W ARB1P40024 610 aaKnown RBP2.03□□□□□ -2.08
UBP1YDL122W TMN3P40071 706 aa2.03□□□□□ -2.08
UBP1YDL122W RGI2P40188 164 aa2.03□□□□□ -2.08
UBP1YDL122W GAT2P40209 560 aa2.03□□□□□ -2.08
UBP1YDL122W MET18P40469 1032 aa2.03□□□□□ -2.08
UBP1YDL122W ECO1P43605 281 aa2.03□□□□□ -2.08
UBP1YDL122W CHA4P43634 648 aa2.03□□□□□ -2.08
UBP1YDL122W COS12P53053 380 aa2.03□□□□□ -2.08
UBP1YDL122W HOS2P53096 452 aaPredicted RBP2.03□□□□□ -2.08
UBP1YDL122W MTG1Q03151 367 aaPredicted RBP2.03□□□□□ -2.08
UBP1YDL122W NGL2Q03264 515 aaKnown RBP2.03□□□□□ -2.08
UBP1YDL122W PRP3Q03338 469 aaPredicted RBP2.03□□□□□ -2.08
UBP1YDL122W ERB1Q04660 807 aaKnown RBP2.03□□□□□ -2.08
UBP1YDL122W NPC2Q12408 173 aa2.03□□□□□ -2.08
UBP1YDL122W EFG1Q3E705 233 aaKnown RBP2.03□□□□□ -2.08
UBP1YDL122W RPS3P05750 240 aaKnown RBP2.03□□□□□ -2.08
UBP1YDL122W PUT4P15380 627 aa2.03□□□□□ -2.08
UBP1YDL122W TRX1P22217 103 aaKnown RBP2.03□□□□□ -2.08
UBP1YDL122W POL4P25615 582 aa2.03□□□□□ -2.08
UBP1YDL122W FEN2P25621 512 aaKnown RBP2.03□□□□□ -2.08
UBP1YDL122W LOT5P34234 306 aa2.03□□□□□ -2.08
UBP1YDL122W MAL33P38157 468 aa2.03□□□□□ -2.08
UBP1YDL122W YHR045WP38775 560 aa2.03□□□□□ -2.08
UBP1YDL122W FAA2P39518 744 aa2.03□□□□□ -2.08
UBP1YDL122W SAE2P46946 345 aa2.03□□□□□ -2.08
UBP1YDL122W BUD13P46947 266 aaPredicted RBP2.03□□□□□ -2.08
UBP1YDL122W MTL1P53214 551 aa2.03□□□□□ -2.08
UBP1YDL122W PIL1P53252 339 aaKnown RBP2.03□□□□□ -2.08
UBP1YDL122W DRN1P53255 507 aaKnown RBP2.03□□□□□ -2.08
UBP1YDL122W MTQ1P53944 314 aa2.03□□□□□ -2.08
UBP1YDL122W MPS1P54199 764 aa2.03□□□□□ -2.08
UBP1YDL122W PRM15Q03262 622 aa2.03□□□□□ -2.08
UBP1YDL122W NKP2Q06162 153 aa2.03□□□□□ -2.08
UBP1YDL122W PIN3Q06449 215 aa2.03□□□□□ -2.08
UBP1YDL122W LDB18Q07887 179 aa2.03□□□□□ -2.08
UBP1YDL122W PUS9Q12069 462 aa2.03□□□□□ -2.08
UBP1YDL122W YOL159C-AQ3E769 90 aa2.03□□□□□ -2.08
UBP1YDL122W DET1Q99288 334 aaKnown RBP2.03□□□□□ -2.08
UBP1YDL122W DFR1P07807 211 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
UBP1YDL122W KAR3P17119 729 aa2.02□□□□□ -2.09
UBP1YDL122W VPS1P21576 704 aaKnown RBP2.02□□□□□ -2.09
UBP1YDL122W VPS34P22543 875 aa2.02□□□□□ -2.09
UBP1YDL122W CLB1P24868 471 aa2.02□□□□□ -2.09
UBP1YDL122W KAR4P25583 335 aa2.02□□□□□ -2.09
UBP1YDL122W NRP1P32770 719 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
UBP1YDL122W KES1P35844 434 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms