RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeastyeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB2YDL084W MSC1Q03104 513 aa5.6□□□□□ -1.51
SUB2YDL084W SNU56Q03782 492 aaKnown RBP5.6□□□□□ -1.51
SUB2YDL084W PAL1Q05518 499 aaKnown RBP5.6□□□□□ -1.51
SUB2YDL084W HDA2Q06629 674 aa5.6□□□□□ -1.51
SUB2YDL084W CRT10Q08226 957 aa5.6□□□□□ -1.51
SUB2YDL084W RDR1Q08904 546 aa5.6□□□□□ -1.51
SUB2YDL084W BTS1Q12051 335 aa5.6□□□□□ -1.51
SUB2YDL084W ZRT2Q12436 422 aa5.6□□□□□ -1.51
SUB2YDL084W LTE1P07866 1435 aa5.6□□□□□ -1.51
SUB2YDL084W KRE5P22023 1365 aa5.59□□□□□ -1.51
SUB2YDL084W TDH2P00358 332 aaKnown RBP5.59□□□□□ -1.51
SUB2YDL084W TDH3P00359 332 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
SUB2YDL084W RPP0P05317 312 aaKnown RBP5.59□□□□□ -1.51
SUB2YDL084W RAD10P06838 210 aa5.59□□□□□ -1.51
SUB2YDL084W SEC53P07283 254 aaKnown RBP5.59□□□□□ -1.51
SUB2YDL084W HVG1P0CE11 249 aa5.59□□□□□ -1.51
SUB2YDL084W CLN3P13365 580 aa5.59□□□□□ -1.51
SUB2YDL084W UGA1P17649 471 aa5.59□□□□□ -1.51
SUB2YDL084W PPH22P23595 377 aa5.59□□□□□ -1.51
SUB2YDL084W ERG6P25087 383 aaKnown RBP5.59□□□□□ -1.51
SUB2YDL084W YCL068CP25593 260 aa5.59□□□□□ -1.51
SUB2YDL084W YCR051WP25631 222 aa5.59□□□□□ -1.51
SUB2YDL084W AAR2P32357 355 aaPredicted RBP5.59□□□□□ -1.51
SUB2YDL084W DUG2P38149 878 aa5.59□□□□□ -1.51
SUB2YDL084W DER1P38307 211 aa5.59□□□□□ -1.51
SUB2YDL084W POP4P38336 279 aa5.59□□□□□ -1.51
SUB2YDL084W LEU5P38702 357 aa5.59□□□□□ -1.51
SUB2YDL084W CKB2P38930 258 aa5.59□□□□□ -1.51
SUB2YDL084W SRP14P38985 146 aa5.59□□□□□ -1.51
SUB2YDL084W ICP55P40051 511 aa5.59□□□□□ -1.51
SUB2YDL084W DOT5P40553 215 aa5.59□□□□□ -1.51
SUB2YDL084W SHR5P41912 237 aa5.59□□□□□ -1.51
SUB2YDL084W YJL163CP46996 555 aa5.59□□□□□ -1.51
SUB2YDL084W BIO3P50277 480 aa5.59□□□□□ -1.51
SUB2YDL084W RSM27P53305 110 aa5.59□□□□□ -1.51
SUB2YDL084W YIP3P53633 176 aa5.59□□□□□ -1.51
SUB2YDL084W SKO1Q02100 647 aa5.59□□□□□ -1.51
SUB2YDL084W BSC6Q08280 497 aa5.59□□□□□ -1.51
SUB2YDL084W GET3Q12154 354 aaKnown RBP5.59□□□□□ -1.51
SUB2YDL084W YOR022CQ12204 715 aa5.59□□□□□ -1.51
SUB2YDL084W PSF1Q12488 208 aa5.59□□□□□ -1.51
SUB2YDL084W TFB5Q3E7C1 72 aaPredicted RBP5.59□□□□□ -1.51
SUB2YDL084W AI1P03875 834 aa5.58□□□□□ -1.52
SUB2YDL084W TUB3P09734 445 aaKnown RBP5.58□□□□□ -1.52
SUB2YDL084W MRP1P10662 321 aaKnown RBP5.58□□□□□ -1.52
SUB2YDL084W SNF3P10870 884 aa5.58□□□□□ -1.52
SUB2YDL084W RFA1P22336 621 aaKnown RBP5.58□□□□□ -1.52
SUB2YDL084W RPL24BP24000 155 aaKnown RBP5.58□□□□□ -1.52
SUB2YDL084W VBA3P25594 458 aa5.58□□□□□ -1.52
SUB2YDL084W PRR1P28708 518 aa5.58□□□□□ -1.52
SUB2YDL084W PYC2P32327 1180 aaKnown RBP5.58□□□□□ -1.52
SUB2YDL084W HBS1P32769 611 aaKnown RBP5.58□□□□□ -1.52
SUB2YDL084W DUT1P33317 147 aa5.58□□□□□ -1.52
SUB2YDL084W SIP2P34164 415 aaKnown RBP5.58□□□□□ -1.52
SUB2YDL084W MRPL15P36523 253 aa5.58□□□□□ -1.52
SUB2YDL084W SHG1P38337 142 aa5.58□□□□□ -1.52
SUB2YDL084W MSC7P38694 644 aa5.58□□□□□ -1.52
SUB2YDL084W DUN1P39009 513 aa5.58□□□□□ -1.52
SUB2YDL084W VMA7P39111 118 aa5.58□□□□□ -1.52
SUB2YDL084W YMR147WP40218 223 aaKnown RBP5.58□□□□□ -1.52
SUB2YDL084W POG1P40473 351 aa5.58□□□□□ -1.52
SUB2YDL084W OYE3P41816 400 aaPredicted RBP5.58□□□□□ -1.52
SUB2YDL084W DIA3P52290 468 aa5.58□□□□□ -1.52
SUB2YDL084W YGL108CP53139 140 aa5.58□□□□□ -1.52
SUB2YDL084W YNR062CP53748 327 aa5.58□□□□□ -1.52
SUB2YDL084W YNR065CP53751 1116 aa5.58□□□□□ -1.52
SUB2YDL084W EEB1Q02891 456 aa5.58□□□□□ -1.52
SUB2YDL084W YPL113CQ02961 396 aa5.58□□□□□ -1.52
SUB2YDL084W ACL4Q03771 387 aa5.58□□□□□ -1.52
SUB2YDL084W NRT1Q08485 598 aa5.58□□□□□ -1.52
SUB2YDL084W FEX1Q08913 375 aa5.58□□□□□ -1.52
SUB2YDL084W RRP42Q12277 265 aaPredicted RBP5.58□□□□□ -1.52
SUB2YDL084W YDR061WQ12298 539 aa5.58□□□□□ -1.52
SUB2YDL084W HRT3Q12347 344 aa5.58□□□□□ -1.52
SUB2YDL084W MRX4Q12467 430 aa5.58□□□□□ -1.52
SUB2YDL084W TIF6Q12522 245 aaKnown RBP5.58□□□□□ -1.52
SUB2YDL084W YOL159C-AQ3E769 90 aa5.58□□□□□ -1.52
SUB2YDL084W GEA2P39993 1459 aaKnown RBP5.57□□□□□ -1.52
SUB2YDL084W LPD1P09624 499 aaKnown RBP5.57□□□□□ -1.52
SUB2YDL084W SPS4P09937 338 aa5.57□□□□□ -1.52
SUB2YDL084W YIM1P28625 365 aa5.57□□□□□ -1.52
SUB2YDL084W NDC1P32500 655 aa5.57□□□□□ -1.52
SUB2YDL084W TAF14P35189 244 aa5.57□□□□□ -1.52
SUB2YDL084W AIM3P38266 947 aaKnown RBP5.57□□□□□ -1.52
SUB2YDL084W RRT2P38332 387 aa5.57□□□□□ -1.52
SUB2YDL084W AIM46P38885 310 aa5.57□□□□□ -1.52
SUB2YDL084W CCT4P39078 528 aaKnown RBP5.57□□□□□ -1.52
SUB2YDL084W RRT14P40470 206 aa5.57□□□□□ -1.52
SUB2YDL084W HXT10P43581 546 aa5.57□□□□□ -1.52
SUB2YDL084W YAE1P47118 141 aaPredicted RBP5.57□□□□□ -1.52
SUB2YDL084W YJR079WP47126 109 aa5.57□□□□□ -1.52
SUB2YDL084W CTH1P47976 325 aa5.57□□□□□ -1.52
SUB2YDL084W RTT102P53330 157 aa5.57□□□□□ -1.52
SUB2YDL084W YNL143CP53908 130 aa5.57□□□□□ -1.52
SUB2YDL084W MOT3P54785 490 aaKnown RBP5.57□□□□□ -1.52
SUB2YDL084W YAT1P80235 687 aa5.57□□□□□ -1.52
SUB2YDL084W YDR179W-AQ03983 463 aa5.57□□□□□ -1.52
SUB2YDL084W CSM3Q04659 317 aa5.57□□□□□ -1.52
SUB2YDL084W YDR278CQ05612 105 aa5.57□□□□□ -1.52
SUB2YDL084W DUS4Q06063 367 aa5.57□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms