RNA–Protein interactions for RNA: YCR083W

TRX3, Transcript of Mitochondrial thioredoxin, yeast

Gene TRX3, Length 384 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRX3	YCR083W	RGC1	Q06108	1083 aa	Known RBP	3.56	□□□□□ -1.84
TRX3	YCR083W	MRI1	Q06489	411 aa	Known RBP	3.56	□□□□□ -1.84
TRX3	YCR083W	YLR012C	Q07927	99 aa		3.56	□□□□□ -1.84
TRX3	YCR083W	YOR387C	Q08910	206 aa		3.56	□□□□□ -1.84
TRX3	YCR083W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.56	□□□□□ -1.84	not detected
TRX3	YCR083W	RTK1	Q12100	620 aa	Predicted RBP	3.56	□□□□□ -1.84
TRX3	YCR083W	TRM13	Q12383	476 aa		3.56	□□□□□ -1.84
TRX3	YCR083W	PEX11	Q12462	236 aa		3.56	□□□□□ -1.84
TRX3	YCR083W	SEM1	O94742	89 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	RAD7	P06779	565 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	SPT3	P06844	337 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	MRP13	P12686	339 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	KSS1	P14681	368 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	MTF1	P14908	341 aa	Known RBP	3.55	□□□□□ -1.84
TRX3	YCR083W	YAP1	P19880	650 aa	Known RBP	3.55	□□□□□ -1.84
TRX3	YCR083W	HOP1	P20050	605 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	DAL81	P21657	970 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	PDE1	P22434	369 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	CMK2	P22517	447 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	URE2	P23202	354 aa	Known RBP	3.55	□□□□□ -1.84
TRX3	YCR083W	CTR86	P25355	563 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	GEX1	P25596	615 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	POL4	P25615	582 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	PEX3	P28795	441 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	PRE4	P30657	266 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	MRPL9	P31334	269 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	SYN8	P31377	255 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	APE2	P32454	952 aa	Known RBP	3.55	□□□□□ -1.84
TRX3	YCR083W	RPT5	P33297	434 aa	Known RBP	3.55	□□□□□ -1.84
TRX3	YCR083W	TIP20	P33891	701 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	THI80	P35202	319 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	PHO11	P35842	467 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	SDS22	P36047	338 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	STB6	P36085	766 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	ALY1	P36117	915 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	GEX2	P36173	615 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	RFS1	P38234	210 aa	Known RBP	3.55	□□□□□ -1.84
TRX3	YCR083W	YBR138C	P38277	524 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	PHO12	P38693	467 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	THO1	P40040	218 aa	Known RBP	3.55	□□□□□ -1.84
TRX3	YCR083W	YJL070C	P40361	888 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	RIC1	P40395	1056 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	AYR1	P40471	297 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	YRB2	P40517	327 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	ELP2	P42935	788 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	RPS0B	P46654	252 aa	Known RBP	3.55	□□□□□ -1.84
TRX3	YCR083W	STB2	P46679	850 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	SIP4	P46954	829 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	GTO1	P48239	356 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	BUL1	P48524	976 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	PHO23	P50947	330 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	SHE4	P51534	789 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	ASI1	P54074	624 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	MOT3	P54785	490 aa	Known RBP	3.55	□□□□□ -1.84
TRX3	YCR083W	PIR1	Q03178	341 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	CLU1	Q03690	1277 aa	Known RBP	3.55	□□□□□ -1.84
TRX3	YCR083W	RTN1	Q04947	295 aa	Known RBP	3.55	□□□□□ -1.84
TRX3	YCR083W	YHC1	Q05900	231 aa	Known RBP	3.55	□□□□□ -1.84
TRX3	YCR083W	BSP1	Q06604	576 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	GPI11	Q06636	219 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	DTD1	Q07648	150 aa	Known RBP	3.55	□□□□□ -1.84
TRX3	YCR083W	IRC13	Q08630	104 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	YPQ1	Q12010	308 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	MLH3	Q12083	715 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	MSH5	Q12175	901 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	YLR046C	Q12253	270 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	RPN6	Q12377	434 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	PFK27	Q12471	397 aa	Predicted RBP	3.55	□□□□□ -1.84
TRX3	YCR083W	VCX1	Q99385	411 aa		3.55	□□□□□ -1.84
TRX3	YCR083W	RAS2	P01120	322 aa	Known RBP	3.54	□□□□□ -1.84
TRX3	YCR083W	RAP1	P11938	827 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	HMG2	P12684	1045 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	PEX1	P24004	1043 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	PUP3	P25451	205 aa	Known RBP	3.54	□□□□□ -1.84
TRX3	YCR083W	RPS5	P26783	225 aa	Known RBP	3.54	□□□□□ -1.84
TRX3	YCR083W	UBC8	P28263	218 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	ITR2	P30606	609 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	CRM1	P30822	1084 aa	Known RBP	3.54	□□□□□ -1.84
TRX3	YCR083W	PUP2	P32379	260 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	DCG1	P32460	244 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	TFB1	P32776	642 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	SEC66	P33754	206 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	YKL100C	P34248	587 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	RMA1	P36001	430 aa	Known RBP	3.54	□□□□□ -1.84
TRX3	YCR083W	RIB1	P38066	345 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	APE4	P38821	490 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	EGD2	P38879	174 aa	Known RBP	3.54	□□□□□ -1.84
TRX3	YCR083W	TIM17	P39515	158 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	RGI1	P40043	161 aa	Predicted RBP	3.54	□□□□□ -1.84
TRX3	YCR083W	PIG2	P40187	538 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	MEP1	P40260	492 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	PAN6	P40459	309 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	YIR016W	P40572	265 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	MSS2	P40990	351 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	MEP2	P41948	499 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	GAT1	P43574	510 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	RMD8	P43620	662 aa		3.54	□□□□□ -1.84
TRX3	YCR083W	PSP1	P50896	841 aa	Known RBP	3.54	□□□□□ -1.84
TRX3	YCR083W	YPT32	P51996	222 aa	Known RBP	3.54	□□□□□ -1.84
TRX3	YCR083W	MNT2	P53059	558 aa		3.54	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms