RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	NAM9	P27929	486 aa		5.42	□□□□□ -1.54
ATG12	YBR217W	PMT2	P31382	759 aa		5.42	□□□□□ -1.54
ATG12	YBR217W	NUP2	P32499	720 aa		5.42	□□□□□ -1.54
ATG12	YBR217W	MSN2	P33748	704 aa		5.42	□□□□□ -1.54
ATG12	YBR217W	LST4	P34239	828 aa		5.42	□□□□□ -1.54
ATG12	YBR217W	SCO2	P38072	301 aa		5.42	□□□□□ -1.54
ATG12	YBR217W	ROT2	P38138	954 aa		5.42	□□□□□ -1.54
ATG12	YBR217W	RIC1	P40395	1056 aa		5.42	□□□□□ -1.54
ATG12	YBR217W	LYS12	P40495	371 aa	Known RBP	5.42	□□□□□ -1.54
ATG12	YBR217W	IMA5	P40884	581 aa		5.42	□□□□□ -1.54
ATG12	YBR217W	SNO3	P43544	222 aa		5.42	□□□□□ -1.54
ATG12	YBR217W	YJL043W	P47053	257 aa		5.42	□□□□□ -1.54
ATG12	YBR217W	YJR115W	P47152	169 aa		5.42	□□□□□ -1.54
ATG12	YBR217W	OCA1	P50946	238 aa	Predicted RBP	5.42	□□□□□ -1.54
ATG12	YBR217W	HOS2	P53096	452 aa	Predicted RBP	5.42	□□□□□ -1.54
ATG12	YBR217W	REH1	Q06709	432 aa		5.42	□□□□□ -1.54
ATG12	YBR217W	YLL007C	Q07799	665 aa		5.42	□□□□□ -1.54
ATG12	YBR217W	YLR036C	Q07986	203 aa		5.42	□□□□□ -1.54
ATG12	YBR217W	RAX1	Q08760	435 aa		5.42	□□□□□ -1.54
ATG12	YBR217W	AKR2	Q12013	749 aa		5.42	□□□□□ -1.54
ATG12	YBR217W	YTM1	Q12024	460 aa	Predicted RBP	5.42	□□□□□ -1.54
ATG12	YBR217W	MLH3	Q12083	715 aa		5.42	□□□□□ -1.54
ATG12	YBR217W	TY4B-P	A0A0B7P3V8	1104 aa		5.41	□□□□□ -1.54
ATG12	YBR217W	TPK2	P06245	380 aa		5.41	□□□□□ -1.54
ATG12	YBR217W	GPI12	P23797	304 aa		5.41	□□□□□ -1.54
ATG12	YBR217W	MEF1	P25039	761 aa		5.41	□□□□□ -1.54
ATG12	YBR217W	YBR139W	P38109	508 aa		5.41	□□□□□ -1.54
ATG12	YBR217W	IST2	P38250	946 aa		5.41	□□□□□ -1.54
ATG12	YBR217W	DLD3	P39976	496 aa	Known RBP	5.41	□□□□□ -1.54
ATG12	YBR217W	PAC10	P48363	199 aa		5.41	□□□□□ -1.54
ATG12	YBR217W	SPT20	P50875	604 aa		5.41	□□□□□ -1.54
ATG12	YBR217W	YGL260W	P53056	76 aa		5.41	□□□□□ -1.54
ATG12	YBR217W	NUP53	Q03790	475 aa		5.41	□□□□□ -1.54
ATG12	YBR217W	RAD33	Q04231	177 aa		5.41	□□□□□ -1.54
ATG12	YBR217W	DYN3	Q04949	312 aa		5.41	□□□□□ -1.54
ATG12	YBR217W	YOL024W	Q08172	172 aa		5.41	□□□□□ -1.54
ATG12	YBR217W	MCH5	Q08777	521 aa		5.41	□□□□□ -1.54
ATG12	YBR217W	NSL1	Q12143	216 aa		5.41	□□□□□ -1.54
ATG12	YBR217W	TOP3	P13099	656 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	RPB5	P20434	215 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	SEC62	P21825	274 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	SAN1	P22470	610 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	NAR1	P23503	491 aa	Known RBP	5.4	□□□□□ -1.54
ATG12	YBR217W	YCL049C	P25577	312 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	BET3	P36149	193 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	FES1	P38260	290 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	SAP30	P38429	201 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	RCK1	P38622	512 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	YHR177W	P38867	453 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	FAD1	P38913	306 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	PZF1	P39933	429 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	SER3	P40054	469 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	QDR2	P40474	542 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	IAH1	P41734	238 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	MRPS18	P42847	217 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	ALB1	P47019	175 aa	Predicted RBP	5.4	□□□□□ -1.54
ATG12	YBR217W	TMA22	P47089	198 aa	Predicted RBP	5.4	□□□□□ -1.54
ATG12	YBR217W	ATP22	P50273	684 aa	Predicted RBP	5.4	□□□□□ -1.54
ATG12	YBR217W	DIA3	P52290	468 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	YGR067C	P53243	804 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	NNF2	P53253	936 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	TPC1	P53257	314 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	YDR476C	Q03362	224 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	YMR210W	Q03649	449 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	HSP31	Q04432	237 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	YMR310C	Q04867	317 aa	Predicted RBP	5.4	□□□□□ -1.54
ATG12	YBR217W	COS7	Q07788	383 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	YEH1	Q07804	573 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	FDH1	Q08911	376 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	PRP46	Q12417	451 aa	Predicted RBP	5.4	□□□□□ -1.54
ATG12	YBR217W	YKL033W-A	Q86ZR7	236 aa		5.4	□□□□□ -1.54
ATG12	YBR217W	CDC39	P25655	2108 aa	Known RBP	5.39	□□□□□ -1.55
ATG12	YBR217W	SAC7	P17121	654 aa		5.39	□□□□□ -1.55
ATG12	YBR217W	CSM1	P25651	190 aa		5.39	□□□□□ -1.55
ATG12	YBR217W	VPS51	P36116	164 aa		5.39	□□□□□ -1.55
ATG12	YBR217W	KAE1	P36132	386 aa		5.39	□□□□□ -1.55
ATG12	YBR217W	SEA4	P38164	1038 aa		5.39	□□□□□ -1.55
ATG12	YBR217W	TRR2	P38816	342 aa		5.39	□□□□□ -1.55
ATG12	YBR217W	MTW1	P39731	289 aa		5.39	□□□□□ -1.55
ATG12	YBR217W	PTI1	P39927	425 aa	Predicted RBP	5.39	□□□□□ -1.55
ATG12	YBR217W	PHB1	P40961	287 aa		5.39	□□□□□ -1.55
ATG12	YBR217W	ARF3	P40994	183 aa	RIP-Chip data	5.39	□□□□□ -1.55	not detected
ATG12	YBR217W	KEL2	P50090	882 aa		5.39	□□□□□ -1.55
ATG12	YBR217W	UBC9	P50623	157 aa	Predicted RBP	5.39	□□□□□ -1.55
ATG12	YBR217W	MMT1	Q03218	510 aa		5.39	□□□□□ -1.55
ATG12	YBR217W	SSQ1	Q05931	657 aa	Predicted RBP	5.39	□□□□□ -1.55
ATG12	YBR217W	YPR172W	Q06608	200 aa		5.39	□□□□□ -1.55
ATG12	YBR217W	YPR091C	Q06833	770 aa		5.39	□□□□□ -1.55
ATG12	YBR217W	OSW1	Q08692	278 aa		5.39	□□□□□ -1.55
ATG12	YBR217W	YOR365C	Q08844	703 aa		5.39	□□□□□ -1.55
ATG12	YBR217W	TMS1	Q12116	473 aa		5.39	□□□□□ -1.55
ATG12	YBR217W	BSC1	Q12140	328 aa		5.39	□□□□□ -1.55
ATG12	YBR217W	CDC9	P04819	755 aa		5.38	□□□□□ -1.55
ATG12	YBR217W	CYT1	P07143	309 aa		5.38	□□□□□ -1.55
ATG12	YBR217W	HTS1	P07263	546 aa	Known RBP	5.38	□□□□□ -1.55
ATG12	YBR217W	YSF3	P0C074	85 aa	Predicted RBP	5.38	□□□□□ -1.55
ATG12	YBR217W	RPL20A	P0CX23	172 aa	Known RBP	5.38	□□□□□ -1.55
ATG12	YBR217W	RPL20B	P0CX24	172 aa	Predicted RBP	5.38	□□□□□ -1.55
ATG12	YBR217W	AAC3	P18238	307 aa		5.38	□□□□□ -1.55
ATG12	YBR217W	YAP1	P19880	650 aa	Known RBP	5.38	□□□□□ -1.55

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