RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W ORT1Q12375 292 aa2.02□□□□□ -2.09
SNC1YAL030W TAD3Q9URQ3 322 aa2.02□□□□□ -2.09
SNC1YAL030W DST1P07273 309 aa2.01□□□□□ -2.09
SNC1YAL030W RPL12AP0CX53 165 aaKnown RBP2.01□□□□□ -2.09
SNC1YAL030W RPL12BP0CX54 165 aa2.01□□□□□ -2.09
SNC1YAL030W SCH9P11792 824 aaKnown RBP2.01□□□□□ -2.09
SNC1YAL030W ATR1P13090 542 aa2.01□□□□□ -2.09
SNC1YAL030W THR4P16120 514 aaKnown RBP2.01□□□□□ -2.09
SNC1YAL030W YCR100CP25606 316 aa2.01□□□□□ -2.09
SNC1YAL030W DAL80P26343 269 aa2.01□□□□□ -2.09
SNC1YAL030W TIP1P27654 210 aaPredicted RBP2.01□□□□□ -2.09
SNC1YAL030W YSC83P32792 385 aa2.01□□□□□ -2.09
SNC1YAL030W PEX2P32800 271 aa2.01□□□□□ -2.09
SNC1YAL030W ARC40P38328 384 aaKnown RBP2.01□□□□□ -2.09
SNC1YAL030W STP2P38704 541 aa2.01□□□□□ -2.09
SNC1YAL030W MST28P39552 234 aa2.01□□□□□ -2.09
SNC1YAL030W HAT2P39984 401 aa2.01□□□□□ -2.09
SNC1YAL030W PCL7P40186 285 aa2.01□□□□□ -2.09
SNC1YAL030W ALG8P40351 577 aa2.01□□□□□ -2.09
SNC1YAL030W MKT1P40850 830 aaKnown RBP2.01□□□□□ -2.09
SNC1YAL030W GCD10P41814 478 aa2.01□□□□□ -2.09
SNC1YAL030W RRT5P43607 289 aa2.01□□□□□ -2.09
SNC1YAL030W YIP5P53108 310 aa2.01□□□□□ -2.09
SNC1YAL030W SCW4P53334 386 aaKnown RBP2.01□□□□□ -2.09
SNC1YAL030W ERV25P54837 211 aaKnown RBP2.01□□□□□ -2.09
SNC1YAL030W STD1Q02794 444 aa2.01□□□□□ -2.09
SNC1YAL030W ERP1Q05359 219 aaKnown RBP2.01□□□□□ -2.09
SNC1YAL030W SNT309Q06091 175 aaPredicted RBP2.01□□□□□ -2.09
SNC1YAL030W GEP3Q08622 556 aa2.01□□□□□ -2.09
SNC1YAL030W PKH2Q12236 1081 aaKnown RBP2.01□□□□□ -2.09
SNC1YAL030W RNH203Q12338 110 aa2.01□□□□□ -2.09
SNC1YAL030W TEF1P02994 458 aaKnown RBP2□□□□□ -2.09
SNC1YAL030W RNR2P09938 399 aaKnown RBP2□□□□□ -2.09
SNC1YAL030W MTF1P14908 341 aaKnown RBP2□□□□□ -2.09
SNC1YAL030W SPO12P17123 173 aa2□□□□□ -2.09
SNC1YAL030W SLM5P25345 492 aaKnown RBP2□□□□□ -2.09
SNC1YAL030W PET18P25362 215 aa2□□□□□ -2.09
SNC1YAL030W RGT1P32862 1170 aa2□□□□□ -2.09
SNC1YAL030W YBR056WP38081 501 aa2□□□□□ -2.09
SNC1YAL030W SPP381P38282 291 aaPredicted RBP2□□□□□ -2.09
SNC1YAL030W YHR122WP38829 231 aa2□□□□□ -2.09
SNC1YAL030W LIN1P38852 340 aaPredicted RBP2□□□□□ -2.09
SNC1YAL030W SSO2P39926 295 aa2□□□□□ -2.09
SNC1YAL030W YER079WP40052 210 aaKnown RBP2□□□□□ -2.09
SNC1YAL030W LCP5P40079 357 aaPredicted RBP2□□□□□ -2.09
SNC1YAL030W MMF1P40185 145 aaKnown RBP2□□□□□ -2.09
SNC1YAL030W OSW5P40219 148 aa2□□□□□ -2.09
SNC1YAL030W SPG5P42933 373 aa2□□□□□ -2.09
SNC1YAL030W LOC1P43586 204 aaPredicted RBP2□□□□□ -2.09
SNC1YAL030W IKS1P47042 667 aa2□□□□□ -2.09
SNC1YAL030W MPP10P47083 593 aaKnown RBP2□□□□□ -2.09
SNC1YAL030W STE24P47154 453 aa2□□□□□ -2.09
SNC1YAL030W POP6P53218 158 aa2□□□□□ -2.09
SNC1YAL030W HST1P53685 503 aa2□□□□□ -2.09
SNC1YAL030W FRE4P53746 719 aa2□□□□□ -2.09
SNC1YAL030W IBD2P53892 351 aa2□□□□□ -2.09
SNC1YAL030W YMR181CQ03231 154 aa2□□□□□ -2.09
SNC1YAL030W BET5Q03630 159 aa2□□□□□ -2.09
SNC1YAL030W VPS20Q04272 221 aa2□□□□□ -2.09
SNC1YAL030W SMA2Q04658 369 aa2□□□□□ -2.09
SNC1YAL030W MSC3Q05812 728 aa2□□□□□ -2.09
SNC1YAL030W YPR078CQ06813 372 aa2□□□□□ -2.09
SNC1YAL030W TIM18Q08749 192 aa2□□□□□ -2.09
SNC1YAL030W MUM3Q08750 479 aa2□□□□□ -2.09
SNC1YAL030W TPT1Q12272 230 aaKnown RBP2□□□□□ -2.09
SNC1YAL030W MDY2Q12285 212 aa2□□□□□ -2.09
SNC1YAL030W CSR2Q12734 1121 aa2□□□□□ -2.09
SNC1YAL030W RRP12Q12754 1228 aaKnown RBP2□□□□□ -2.09
SNC1YAL030W CBP2P03874 630 aaPredicted RBP1.99□□□□□ -2.09
SNC1YAL030W CDC37P06101 506 aaKnown RBP1.99□□□□□ -2.09
SNC1YAL030W STE3P06783 470 aa1.99□□□□□ -2.09
SNC1YAL030W SAM1P10659 382 aaKnown RBP1.99□□□□□ -2.09
SNC1YAL030W ARF1P11076 181 aaKnown RBP1.99□□□□□ -2.09
SNC1YAL030W RNA1P11745 407 aaKnown RBP1.99□□□□□ -2.09
SNC1YAL030W GCD2P12754 651 aaPredicted RBP1.99□□□□□ -2.09
SNC1YAL030W CDC23P16522 626 aa1.99□□□□□ -2.09
SNC1YAL030W RNA14P25298 677 aaKnown RBP1.99□□□□□ -2.09
SNC1YAL030W PUT3P25502 979 aaPredicted RBP1.99□□□□□ -2.09
SNC1YAL030W HMX1P32339 317 aa1.99□□□□□ -2.09
SNC1YAL030W EFB1P32471 206 aaKnown RBP1.99□□□□□ -2.09
SNC1YAL030W NDC1P32500 655 aa1.99□□□□□ -2.09
SNC1YAL030W GLC7P32598 312 aaKnown RBP1.99□□□□□ -2.09
SNC1YAL030W COX13P32799 129 aa1.99□□□□□ -2.09
SNC1YAL030W TRS65P32893 560 aa1.99□□□□□ -2.09
SNC1YAL030W PTR2P32901 601 aa1.99□□□□□ -2.09
SNC1YAL030W SKN1P33336 771 aa1.99□□□□□ -2.09
SNC1YAL030W SKT5P34226 696 aa1.99□□□□□ -2.09
SNC1YAL030W KKQ8P36004 724 aa1.99□□□□□ -2.09
SNC1YAL030W DOA1P36037 715 aa1.99□□□□□ -2.09
SNC1YAL030W ATP3P38077 311 aaKnown RBP1.99□□□□□ -2.09
SNC1YAL030W BZZ1P38822 633 aa1.99□□□□□ -2.09
SNC1YAL030W SHO1P40073 367 aa1.99□□□□□ -2.09
SNC1YAL030W YIL169CP40442 995 aa1.99□□□□□ -2.09
SNC1YAL030W SFH5P47008 294 aa1.99□□□□□ -2.09
SNC1YAL030W RTT101P47050 842 aa1.99□□□□□ -2.09
SNC1YAL030W AVT4P50944 713 aa1.99□□□□□ -2.09
SNC1YAL030W PMT5P52867 743 aa1.99□□□□□ -2.09
SNC1YAL030W RET3P53600 189 aa1.99□□□□□ -2.09
SNC1YAL030W CAF40P53829 373 aa1.99□□□□□ -2.09
SNC1YAL030W VTI1Q04338 217 aa1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 44 ms