RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 PFKFB3Q16875 520 aaPredicted RBP13.52□□□□□ -0.25
ERGIC3-220ENST00000640748 TPRNQ4KMQ1 711 aa13.52□□□□□ -0.25
ERGIC3-220ENST00000640748 FAM47CQ5HY64 1035 aa13.52□□□□□ -0.25
ERGIC3-220ENST00000640748 STAG2Q8N3U4 1231 aa13.52□□□□□ -0.25
ERGIC3-220ENST00000640748 PHF20Q9BVI0 1012 aa13.52□□□□□ -0.25
ERGIC3-220ENST00000640748 UBA5Q9GZZ9 404 aa13.52□□□□□ -0.25
ERGIC3-220ENST00000640748 BRMS1Q9HCU9 246 aa13.52□□□□□ -0.25
ERGIC3-220ENST00000640748 PNMA2Q9UL42 364 aa13.52□□□□□ -0.25
ERGIC3-220ENST00000640748 PRRC2BQ5JSZ5 2229 aaKnown RBP13.52□□□□□ -0.25
ERGIC3-220ENST00000640748 TET1Q8NFU7 2136 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 hCG_1642624A0A1W2PR95 340 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 FSD2A1L4K1 749 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 BTBD18B2RXH4 712 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 BMP1P13497 986 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 POU3F3P20264 500 aaPredicted RBP13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 RFC2P35250 354 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 KRT2P35908 639 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 NASPP49321 788 aaPredicted RBP13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 TFF2Q03403 129 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 PTPN11Q06124 597 aaPredicted RBP13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 SF3A1Q15459 793 aaKnown RBP13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 USH1GQ495M9 461 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 ASPRV1Q53RT3 343 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 GPATCH4Q5T3I0 446 aaKnown RBP13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 SPRED2Q7Z698 418 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 NOSTRINQ8IVI9 506 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 LINC00301Q8NCQ3 95 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 BICD2Q8TD16 824 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 KCNG4Q8TDN1 519 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 AFG1LQ8WV93 481 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 KAT2BQ92831 832 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 PGBD1Q96JS3 809 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 NECAB3Q96P71 396 aaPredicted RBP13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 UHRF1Q96T88 793 aaPredicted RBP13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 SPZ1Q9BXG8 430 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 VPS54Q9P1Q0 977 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 MTCH2Q9Y6C9 303 aa13.51□□□□□ -0.25
ERGIC3-220ENST00000640748 KLRF2D3W0D1 207 aa13.5□□□□□ -0.25
ERGIC3-220ENST00000640748 TAP1Q03518 808 aa13.5□□□□□ -0.25
ERGIC3-220ENST00000640748 ARHGAP1Q07960 439 aa13.5□□□□□ -0.25
ERGIC3-220ENST00000640748 CDC37Q16543 378 aaPredicted RBP13.5□□□□□ -0.25
ERGIC3-220ENST00000640748 LY6KQ17RY6 165 aa13.5□□□□□ -0.25
ERGIC3-220ENST00000640748 BRDTQ58F21 947 aaPredicted RBP13.5□□□□□ -0.25
ERGIC3-220ENST00000640748 HERC6Q8IVU3 1022 aa13.5□□□□□ -0.25
ERGIC3-220ENST00000640748 FAM177A1Q8N128 213 aaPredicted RBP13.5□□□□□ -0.25
ERGIC3-220ENST00000640748 MICALL1Q8N3F8 863 aa13.5□□□□□ -0.25
ERGIC3-220ENST00000640748 PHOSPHO2Q8TCD6 241 aa13.5□□□□□ -0.25
ERGIC3-220ENST00000640748 SYTL5Q8TDW5 730 aaPredicted RBP13.5□□□□□ -0.25
ERGIC3-220ENST00000640748 DHX38Q92620 1227 aaKnown RBP13.5□□□□□ -0.25
ERGIC3-220ENST00000640748 TAAR1Q96RJ0 339 aa13.5□□□□□ -0.25
ERGIC3-220ENST00000640748 SLC9A7Q96T83 725 aa13.5□□□□□ -0.25
ERGIC3-220ENST00000640748 FTOQ9C0B1 505 aaKnown RBP eCLIP13.5□□□□□ -0.25
ERGIC3-220ENST00000640748 CERS4Q9HA82 394 aa13.5□□□□□ -0.25
ERGIC3-220ENST00000640748 SH3GLB2Q9NR46 395 aa13.5□□□□□ -0.25
ERGIC3-220ENST00000640748 RAPGEFL1Q9UHV5 662 aa13.5□□□□□ -0.25
ERGIC3-220ENST00000640748 CLIC4Q9Y696 253 aa13.5□□□□□ -0.25
ERGIC3-220ENST00000640748 TANC1Q9C0D5 1861 aa13.5□□□□□ -0.25
ERGIC3-220ENST00000640748 SPTLC2O15270 562 aa13.49□□□□□ -0.25
ERGIC3-220ENST00000640748 MMP3P08254 477 aa13.49□□□□□ -0.25
ERGIC3-220ENST00000640748 ACTN1P12814 892 aa13.49□□□□□ -0.25
ERGIC3-220ENST00000640748 COL9A1P20849 921 aa13.49□□□□□ -0.25
ERGIC3-220ENST00000640748 ME1P48163 572 aa13.49□□□□□ -0.25
ERGIC3-220ENST00000640748 KCNQ1P51787 676 aa13.49□□□□□ -0.25
ERGIC3-220ENST00000640748 NLRP5P59047 1200 aa13.49□□□□□ -0.25
ERGIC3-220ENST00000640748 BFSP2Q13515 415 aa13.49□□□□□ -0.25
ERGIC3-220ENST00000640748 PTGISQ16647 500 aa13.49□□□□□ -0.25
ERGIC3-220ENST00000640748 RILPL1Q5EBL4 403 aa13.49□□□□□ -0.25
ERGIC3-220ENST00000640748 GDF6Q6KF10 455 aaPredicted RBP13.49□□□□□ -0.25
ERGIC3-220ENST00000640748 LRSAM1Q6UWE0 723 aa13.49□□□□□ -0.25
ERGIC3-220ENST00000640748 SESTD1Q86VW0 696 aa13.49□□□□□ -0.25
ERGIC3-220ENST00000640748 ADGRF4Q8IZF3 695 aa13.49□□□□□ -0.25
ERGIC3-220ENST00000640748 RETREG2Q8NC44 543 aa13.49□□□□□ -0.25
ERGIC3-220ENST00000640748 PIBF1Q8WXW3 757 aa13.49□□□□□ -0.25
ERGIC3-220ENST00000640748 MPHOSPH6Q99547 160 aaKnown RBP13.49□□□□□ -0.25
ERGIC3-220ENST00000640748 DDX19AQ9NUU7 478 aaKnown RBP13.49□□□□□ -0.25
ERGIC3-220ENST00000640748 ABCB11O95342 1321 aa13.48□□□□□ -0.25
ERGIC3-220ENST00000640748 SYCE3A1L190 88 aa13.48□□□□□ -0.25
ERGIC3-220ENST00000640748 OPLAHO14841 1288 aa13.48□□□□□ -0.25
ERGIC3-220ENST00000640748 LPXNO60711 386 aa13.48□□□□□ -0.25
ERGIC3-220ENST00000640748 LIG1P18858 919 aa13.48□□□□□ -0.25
ERGIC3-220ENST00000640748 MRE11P49959 708 aa13.48□□□□□ -0.25
ERGIC3-220ENST00000640748 SLC39A14Q15043 492 aa13.48□□□□□ -0.25
ERGIC3-220ENST00000640748 TCTN1Q2MV58 587 aa13.48□□□□□ -0.25
ERGIC3-220ENST00000640748 QRICH1Q2TAL8 776 aa13.48□□□□□ -0.25
ERGIC3-220ENST00000640748 SEPT14Q6ZU15 432 aa13.48□□□□□ -0.25
ERGIC3-220ENST00000640748 CCDC148Q8NFR7 591 aa13.48□□□□□ -0.25
ERGIC3-220ENST00000640748 NSUN6Q8TEA1 469 aaKnown RBP13.48□□□□□ -0.25
ERGIC3-220ENST00000640748 RRP36Q96EU6 259 aaKnown RBP13.48□□□□□ -0.25
ERGIC3-220ENST00000640748 MAF1Q9H063 256 aa13.48□□□□□ -0.25
ERGIC3-220ENST00000640748 NOL7Q9UMY1 257 aaKnown RBP13.48□□□□□ -0.25
ERGIC3-220ENST00000640748 A0A1W2PQ27 194 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 A0A1W2PQ64 194 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 A0A1W2PQD8 194 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 LCHNA4D1U4 455 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 B4DLN1 442 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 CYTH3O43739 400 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 PPP6R2O75170 966 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 GH1P01241 217 aa13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 MRPL12P52815 198 aaKnown RBP13.47□□□□□ -0.25
ERGIC3-220ENST00000640748 CHMP4BP1P59074 171 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms