RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 ANTXR2P58335 489 aa12.65□□□□□ -0.38
LINC00963-214ENST00000622680 AAMPQ13685 434 aa12.65□□□□□ -0.38
LINC00963-214ENST00000622680 NEDD9Q14511 834 aa12.65□□□□□ -0.38
LINC00963-214ENST00000622680 PTPROQ16827 1216 aa12.65□□□□□ -0.38
LINC00963-214ENST00000622680 TTC22Q5TAA0 569 aa12.65□□□□□ -0.38
LINC00963-214ENST00000622680 USP17L6PQ6QN14 398 aa12.65□□□□□ -0.38
LINC00963-214ENST00000622680 RUFY4Q6ZNE9 571 aa12.65□□□□□ -0.38
LINC00963-214ENST00000622680 RALYLQ86SE5 291 aaKnown RBP12.65□□□□□ -0.38
LINC00963-214ENST00000622680 BANK1Q8NDB2 785 aa12.65□□□□□ -0.38
LINC00963-214ENST00000622680 NEK9Q8TD19 979 aa12.65□□□□□ -0.38
LINC00963-214ENST00000622680 YTHDC1Q96MU7 727 aaKnown RBP12.65□□□□□ -0.38
LINC00963-214ENST00000622680 USP26Q9BXU7 913 aa12.65□□□□□ -0.38
LINC00963-214ENST00000622680 FIBPO43427 364 aa12.64□□□□□ -0.39
LINC00963-214ENST00000622680 CAND2O75155 1236 aa12.64□□□□□ -0.39
LINC00963-214ENST00000622680 GHRP10912 638 aa12.64□□□□□ -0.39
LINC00963-214ENST00000622680 CTNNB1P35222 781 aa12.64□□□□□ -0.39
LINC00963-214ENST00000622680 ADAM17P78536 824 aa12.64□□□□□ -0.39
LINC00963-214ENST00000622680 SMARCC2Q8TAQ2 1214 aa12.64□□□□□ -0.39
LINC00963-214ENST00000622680 SAMD11Q96NU1 681 aa12.64□□□□□ -0.39
LINC00963-214ENST00000622680 ZNF215Q9UL58 517 aaPredicted RBP12.64□□□□□ -0.39
LINC00963-214ENST00000622680 ADGRA3Q8IWK6 1321 aa12.63□□□□□ -0.39
LINC00963-214ENST00000622680 STAM2O75886 525 aa12.63□□□□□ -0.39
LINC00963-214ENST00000622680 CHRNA1P02708 482 aa12.63□□□□□ -0.39
LINC00963-214ENST00000622680 MARK3P27448 753 aa12.63□□□□□ -0.39
LINC00963-214ENST00000622680 TCF7P36402 384 aaPredicted RBP12.63□□□□□ -0.39
LINC00963-214ENST00000622680 TRAF1Q13077 416 aa12.63□□□□□ -0.39
LINC00963-214ENST00000622680 SART3Q15020 963 aaKnown RBP12.63□□□□□ -0.39
LINC00963-214ENST00000622680 CLUL1Q15846 466 aa12.63□□□□□ -0.39
LINC00963-214ENST00000622680 PCNX4Q63HM2 1172 aa12.63□□□□□ -0.39
LINC00963-214ENST00000622680 MB21D2Q8IYB1 491 aaPredicted RBP12.63□□□□□ -0.39
LINC00963-214ENST00000622680 ZNF654Q8IZM8 581 aa12.63□□□□□ -0.39
LINC00963-214ENST00000622680 NCOA7Q8NI08 942 aa12.63□□□□□ -0.39
LINC00963-214ENST00000622680 APBB2Q92870 758 aa12.63□□□□□ -0.39
LINC00963-214ENST00000622680 PABPC5Q96DU9 382 aaKnown RBP12.63□□□□□ -0.39
LINC00963-214ENST00000622680 NSUN3Q9H649 340 aaKnown RBP12.63□□□□□ -0.39
LINC00963-214ENST00000622680 RC3H2Q9HBD1 1191 aaKnown RBP12.63□□□□□ -0.39
LINC00963-214ENST00000622680 CLDND1Q9NY35 253 aa12.63□□□□□ -0.39
LINC00963-214ENST00000622680 PKD2L1Q9P0L9 805 aa12.63□□□□□ -0.39
LINC00963-214ENST00000622680 U3KPZ7 1027 aaPredicted RBP12.63□□□□□ -0.39
LINC00963-214ENST00000622680 USP34Q70CQ2 3546 aa12.63□□□□□ -0.39
LINC00963-214ENST00000622680 MEIS2O14770 477 aa12.62□□□□□ -0.39
LINC00963-214ENST00000622680 GRM6O15303 877 aa12.62□□□□□ -0.39
LINC00963-214ENST00000622680 PLEKHA8P1O95397 391 aa12.62□□□□□ -0.39
LINC00963-214ENST00000622680 LINC00271P0C7V0 271 aa12.62□□□□□ -0.39
LINC00963-214ENST00000622680 GNAT1P11488 350 aa12.62□□□□□ -0.39
LINC00963-214ENST00000622680 CHMLP26374 656 aa12.62□□□□□ -0.39
LINC00963-214ENST00000622680 ZP2Q05996 745 aa12.62□□□□□ -0.39
LINC00963-214ENST00000622680 COL9A3Q14050 684 aaPredicted RBP12.62□□□□□ -0.39
LINC00963-214ENST00000622680 LPIN1Q14693 890 aa12.62□□□□□ -0.39
LINC00963-214ENST00000622680 FAM26DQ5JW98 314 aa12.62□□□□□ -0.39
LINC00963-214ENST00000622680 CATIPQ7Z7H3 387 aa12.62□□□□□ -0.39
LINC00963-214ENST00000622680 RPAINQ86UA6 219 aa12.62□□□□□ -0.39
LINC00963-214ENST00000622680 CMTR1Q8N1G2 835 aaKnown RBP12.62□□□□□ -0.39
LINC00963-214ENST00000622680 FIBCD1Q8N539 461 aa12.62□□□□□ -0.39
LINC00963-214ENST00000622680 CUL5Q93034 780 aa12.62□□□□□ -0.39
LINC00963-214ENST00000622680 ZBTB10Q96DT7 871 aa12.62□□□□□ -0.39
LINC00963-214ENST00000622680 UIMC1Q96RL1 719 aa12.62□□□□□ -0.39
LINC00963-214ENST00000622680 SPZ1Q9BXG8 430 aa12.62□□□□□ -0.39
LINC00963-214ENST00000622680 LY9Q9HBG7 655 aa12.62□□□□□ -0.39
LINC00963-214ENST00000622680 hCG_1642624A0A1W2PR95 340 aa12.61□□□□□ -0.39
LINC00963-214ENST00000622680 PRR33A8MZF0 331 aa12.61□□□□□ -0.39
LINC00963-214ENST00000622680 ATP9AO75110 1047 aa12.61□□□□□ -0.39
LINC00963-214ENST00000622680 KCNA2P16389 499 aa12.61□□□□□ -0.39
LINC00963-214ENST00000622680 RXRAP19793 462 aa12.61□□□□□ -0.39
LINC00963-214ENST00000622680 GTF2F1P35269 517 aaKnown RBP eCLIP12.61□□□□□ -0.391e-6■■■■■ 32
LINC00963-214ENST00000622680 LTBRP36941 435 aa12.61□□□□□ -0.39
LINC00963-214ENST00000622680 DLX2Q07687 328 aaPredicted RBP12.61□□□□□ -0.39
LINC00963-214ENST00000622680 MGAT3Q09327 533 aa12.61□□□□□ -0.39
LINC00963-214ENST00000622680 PPFIA1Q13136 1202 aa12.61□□□□□ -0.39
LINC00963-214ENST00000622680 COL19A1Q14993 1142 aa12.61□□□□□ -0.39
LINC00963-214ENST00000622680 UBE2SQ16763 222 aa12.61□□□□□ -0.39
LINC00963-214ENST00000622680 RAB11FIP4Q86YS3 637 aa12.61□□□□□ -0.39
LINC00963-214ENST00000622680 IGDCC4Q8TDY8 1250 aa12.61□□□□□ -0.39
LINC00963-214ENST00000622680 LINC01599Q8WXQ3 324 aa12.61□□□□□ -0.39
LINC00963-214ENST00000622680 RRP36Q96EU6 259 aaKnown RBP12.61□□□□□ -0.39
LINC00963-214ENST00000622680 IL17RAQ96F46 866 aa12.61□□□□□ -0.39
LINC00963-214ENST00000622680 EHMT1Q9H9B1 1298 aa12.61□□□□□ -0.39
LINC00963-214ENST00000622680 TUBE1Q9UJT0 475 aa12.61□□□□□ -0.39
LINC00963-214ENST00000622680 ARIH1Q9Y4X5 557 aaPredicted RBP12.61□□□□□ -0.39
LINC00963-214ENST00000622680 NRCAMQ92823 1304 aa12.61□□□□□ -0.39
LINC00963-214ENST00000622680 GSTTP1A0A1W2PQM5 241 aa12.6□□□□□ -0.39
LINC00963-214ENST00000622680 TBX10O75333 385 aa12.6□□□□□ -0.39
LINC00963-214ENST00000622680 DDAH1O94760 285 aa12.6□□□□□ -0.39
LINC00963-214ENST00000622680 IGBP1P78318 339 aa12.6□□□□□ -0.39
LINC00963-214ENST00000622680 HYAL1Q12794 435 aa12.6□□□□□ -0.39
LINC00963-214ENST00000622680 GRIK4Q16099 956 aa12.6□□□□□ -0.39
LINC00963-214ENST00000622680 CTCFLQ8NI51 663 aaPredicted RBP12.6□□□□□ -0.39
LINC00963-214ENST00000622680 DNAJB3Q8WWF6 145 aa12.6□□□□□ -0.39
LINC00963-214ENST00000622680 RUFY2Q8WXA3 655 aa12.6□□□□□ -0.39
LINC00963-214ENST00000622680 SENP7Q9BQF6 1050 aa12.6□□□□□ -0.39
LINC00963-214ENST00000622680 C11orf84Q9BUA3 381 aaPredicted RBP12.6□□□□□ -0.39
LINC00963-214ENST00000622680 SEC63Q9UGP8 760 aaKnown RBP12.6□□□□□ -0.39
LINC00963-214ENST00000622680 RBM8AQ9Y5S9 174 aaKnown RBP12.6□□□□□ -0.39
LINC00963-214ENST00000622680 CDY2AQ9Y6F7 541 aa12.6□□□□□ -0.39
LINC00963-214ENST00000622680 C2orf16Q68DN1 1984 aa12.6□□□□□ -0.39
LINC00963-214ENST00000622680 CFAP54Q96N23 3096 aa12.59□□□□□ -0.39
LINC00963-214ENST00000622680 C5orf67F2Z3F1 127 aa12.59□□□□□ -0.39
LINC00963-214ENST00000622680 PIK3CDO00329 1044 aa12.59□□□□□ -0.39
LINC00963-214ENST00000622680 LINC01565O15544 149 aa12.59□□□□□ -0.39
LINC00963-214ENST00000622680 SGSM2O43147 1006 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms