RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 SEPT1Q8WYJ6 367 aa19.5■□□□□ 0.71
SCAF1-204ENST00000601038 NEK1Q96PY6 1258 aa19.5■□□□□ 0.71
SCAF1-204ENST00000601038 UHRF1Q96T88 793 aaPredicted RBP19.5■□□□□ 0.71
SCAF1-204ENST00000601038 SUGCTQ9HAC7 445 aa19.5■□□□□ 0.71
SCAF1-204ENST00000601038 PCDHA6Q9UN73 950 aa19.5■□□□□ 0.71
SCAF1-204ENST00000601038 COG5Q9UP83 839 aa19.5■□□□□ 0.71
SCAF1-204ENST00000601038 PCDHA8Q9Y5H6 950 aa19.5■□□□□ 0.71
SCAF1-204ENST00000601038 RBAK-RBAKDNI3L0D1 243 aa19.49■□□□□ 0.71
SCAF1-204ENST00000601038 CTSHP09668 335 aa19.49■□□□□ 0.71
SCAF1-204ENST00000601038 ARHGAP4P98171 946 aa19.49■□□□□ 0.71
SCAF1-204ENST00000601038 EXOSC10Q01780 885 aaKnown RBP19.49■□□□□ 0.71
SCAF1-204ENST00000601038 MTMR1Q13613 665 aa19.49■□□□□ 0.71
SCAF1-204ENST00000601038 UBE2SQ16763 222 aa19.49■□□□□ 0.71
SCAF1-204ENST00000601038 TSGA10IPQ3SY00 556 aa19.49■□□□□ 0.71
SCAF1-204ENST00000601038 FAM26DQ5JW98 314 aa19.49■□□□□ 0.71
SCAF1-204ENST00000601038 APOA5Q6Q788 366 aa19.49■□□□□ 0.71
SCAF1-204ENST00000601038 CENPQQ7L2Z9 268 aaPredicted RBP19.49■□□□□ 0.71
SCAF1-204ENST00000601038 HEATR3Q7Z4Q2 680 aa19.49■□□□□ 0.71
SCAF1-204ENST00000601038 MYOCDQ8IZQ8 938 aa19.49■□□□□ 0.71
SCAF1-204ENST00000601038 JADE2Q9NQC1 790 aa19.49■□□□□ 0.71
SCAF1-204ENST00000601038 RBM28Q9NW13 759 aaKnown RBP19.49■□□□□ 0.71
SCAF1-204ENST00000601038 MICAL3Q7RTP6 2002 aa19.48■□□□□ 0.71
SCAF1-204ENST00000601038 KAT6AQ92794 2004 aa19.48■□□□□ 0.71
SCAF1-204ENST00000601038 GSTTP1A0A1W2PQM5 241 aa19.48■□□□□ 0.71
SCAF1-204ENST00000601038 HTRA4P83105 476 aaPredicted RBP19.48■□□□□ 0.71
SCAF1-204ENST00000601038 DHX32Q7L7V1 743 aaKnown RBP19.48■□□□□ 0.71
SCAF1-204ENST00000601038 RPAINQ86UA6 219 aa19.48■□□□□ 0.71
SCAF1-204ENST00000601038 TEX2Q8IWB9 1127 aa19.48■□□□□ 0.71
SCAF1-204ENST00000601038 GDPD5Q8WTR4 605 aa19.48■□□□□ 0.71
SCAF1-204ENST00000601038 OSBPL7Q9BZF2 842 aa19.48■□□□□ 0.71
SCAF1-204ENST00000601038 EHMT1Q9H9B1 1298 aa19.48■□□□□ 0.71
SCAF1-204ENST00000601038 MTUS1Q9ULD2 1270 aa19.48■□□□□ 0.71
SCAF1-204ENST00000601038 TAF2Q6P1X5 1199 aa19.47■□□□□ 0.71
SCAF1-204ENST00000601038 SKAP1Q86WV1 359 aa19.47■□□□□ 0.71
SCAF1-204ENST00000601038 APBB2Q92870 758 aa19.47■□□□□ 0.71
SCAF1-204ENST00000601038 HLA-CQ95604 372 aa19.47■□□□□ 0.71
SCAF1-204ENST00000601038 TOP1MTQ969P6 601 aa19.47■□□□□ 0.71
SCAF1-204ENST00000601038 ERAP1Q9NZ08 941 aa19.47■□□□□ 0.71
SCAF1-204ENST00000601038 SPTBN5Q9NRC6 3674 aaKnown RBP19.47■□□□□ 0.71
SCAF1-204ENST00000601038 KCNQ1P51787 676 aa19.46■□□□□ 0.71
SCAF1-204ENST00000601038 FUT2Q10981 343 aa19.46■□□□□ 0.71
SCAF1-204ENST00000601038 WWC2Q6AWC2 1192 aa19.46■□□□□ 0.71
SCAF1-204ENST00000601038 RASEFQ8IZ41 740 aa19.46■□□□□ 0.71
SCAF1-204ENST00000601038 SP7Q8TDD2 431 aaPredicted RBP19.46■□□□□ 0.71
SCAF1-204ENST00000601038 GLG1Q92896 1179 aa19.46■□□□□ 0.71
SCAF1-204ENST00000601038 SMARCAD1Q9H4L7 1026 aa19.46■□□□□ 0.71
SCAF1-204ENST00000601038 RIC8AQ9NPQ8 531 aa19.46■□□□□ 0.71
SCAF1-204ENST00000601038 BRPF3Q9ULD4 1205 aa19.46■□□□□ 0.71
SCAF1-204ENST00000601038 TCF20Q9UGU0 1960 aaKnown RBP19.46■□□□□ 0.71
SCAF1-204ENST00000601038 CNTNAP5Q8WYK1 1306 aa19.46■□□□□ 0.71
SCAF1-204ENST00000601038 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.45■□□□□ 0.7
SCAF1-204ENST00000601038 ZBTB43O43298 467 aa19.45■□□□□ 0.7
SCAF1-204ENST00000601038 FOSP01100 380 aaPredicted RBP19.45■□□□□ 0.7
SCAF1-204ENST00000601038 CHRNA1P02708 482 aa19.45■□□□□ 0.7
SCAF1-204ENST00000601038 PPFIA1Q13136 1202 aa19.45■□□□□ 0.7
SCAF1-204ENST00000601038 RTN1Q16799 776 aa19.45■□□□□ 0.7
SCAF1-204ENST00000601038 ADCK5Q3MIX3 580 aa19.45■□□□□ 0.7
SCAF1-204ENST00000601038 TCEANC2Q96MN5 208 aa19.45■□□□□ 0.7
SCAF1-204ENST00000601038 MXRA8Q9BRK3 442 aa19.45■□□□□ 0.7
SCAF1-204ENST00000601038 IFIH1Q9BYX4 1025 aaKnown RBP19.45■□□□□ 0.7
SCAF1-204ENST00000601038 KCNH7Q9NS40 1196 aa19.45■□□□□ 0.7
SCAF1-204ENST00000601038 PKD2L1Q9P0L9 805 aa19.45■□□□□ 0.7
SCAF1-204ENST00000601038 V9GY48 417 aaPredicted RBP19.45■□□□□ 0.7
SCAF1-204ENST00000601038 MBLAC1A4D2B0 266 aaPredicted RBP19.44■□□□□ 0.7
SCAF1-204ENST00000601038 hCG_1984214I3L0E3 225 aa19.44■□□□□ 0.7
SCAF1-204ENST00000601038 MARK3P27448 753 aa19.44■□□□□ 0.7
SCAF1-204ENST00000601038 NAPAP54920 295 aa19.44■□□□□ 0.7
SCAF1-204ENST00000601038 KRT32Q14532 448 aa19.44■□□□□ 0.7
SCAF1-204ENST00000601038 GRIK4Q16099 956 aa19.44■□□□□ 0.7
SCAF1-204ENST00000601038 TYW1BQ6NUM6 668 aa19.44■□□□□ 0.7
SCAF1-204ENST00000601038 PPP1R18Q6NYC8 613 aa19.44■□□□□ 0.7
SCAF1-204ENST00000601038 RUFY4Q6ZNE9 571 aa19.44■□□□□ 0.7
SCAF1-204ENST00000601038 RSPH3Q86UC2 560 aa19.44■□□□□ 0.7
SCAF1-204ENST00000601038 ZNF713Q8N859 430 aaPredicted RBP19.44■□□□□ 0.7
SCAF1-204ENST00000601038 FBXO22Q8NEZ5 403 aa19.44■□□□□ 0.7
SCAF1-204ENST00000601038 C17orf80Q9BSJ5 609 aa19.44■□□□□ 0.7
SCAF1-204ENST00000601038 JPH1Q9HDC5 661 aaPredicted RBP19.44■□□□□ 0.7
SCAF1-204ENST00000601038 TUBE1Q9UJT0 475 aa19.44■□□□□ 0.7
SCAF1-204ENST00000601038 SIP14410 1827 aa19.44■□□□□ 0.7
SCAF1-204ENST00000601038 COL4A4P53420 1690 aaPredicted RBP19.43■□□□□ 0.7
SCAF1-204ENST00000601038 CDC45O75419 566 aa19.43■□□□□ 0.7
SCAF1-204ENST00000601038 UPP2O95045 317 aa19.43■□□□□ 0.7
SCAF1-204ENST00000601038 HMGB1P09429 215 aaKnown RBP19.43■□□□□ 0.7
SCAF1-204ENST00000601038 RCAN1P53805 252 aa19.43■□□□□ 0.7
SCAF1-204ENST00000601038 MARCH8Q5T0T0 291 aa19.43■□□□□ 0.7
SCAF1-204ENST00000601038 CYP2W1Q8TAV3 490 aa19.43■□□□□ 0.7
SCAF1-204ENST00000601038 SAMD11Q96NU1 681 aa19.43■□□□□ 0.7
SCAF1-204ENST00000601038 NECAB3Q96P71 396 aaPredicted RBP19.43■□□□□ 0.7
SCAF1-204ENST00000601038 YME1L1Q96TA2 773 aa19.43■□□□□ 0.7
SCAF1-204ENST00000601038 SLC9A2Q9UBY0 812 aa19.43■□□□□ 0.7
SCAF1-204ENST00000601038 NCOR1O75376 2440 aa19.43■□□□□ 0.7
SCAF1-204ENST00000601038 TRANK1O15050 2925 aa19.42■□□□□ 0.7
SCAF1-204ENST00000601038 RRN3P2A6NIE6 340 aa19.42■□□□□ 0.7
SCAF1-204ENST00000601038 STXBP3O00186 592 aa19.42■□□□□ 0.7
SCAF1-204ENST00000601038 ADCY7P51828 1080 aa19.42■□□□□ 0.7
SCAF1-204ENST00000601038 TNPO1Q92973 898 aaKnown RBP19.42■□□□□ 0.7
SCAF1-204ENST00000601038 PCYT2Q99447 389 aa19.42■□□□□ 0.7
SCAF1-204ENST00000601038 GLT8D2Q9H1C3 349 aa19.42■□□□□ 0.7
SCAF1-204ENST00000601038 FAM217BQ9NTX9 383 aaPredicted RBP19.42■□□□□ 0.7
SCAF1-204ENST00000601038 BARHL2Q9NY43 387 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms