RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 FCHSD1Q86WN1 690 aa11.57□□□□□ -0.56
HIF3A-219ENST00000600879 ESR2Q92731 530 aa11.57□□□□□ -0.56
HIF3A-219ENST00000600879 EVI5LQ96CN4 794 aa11.57□□□□□ -0.56
HIF3A-219ENST00000600879 APOL5Q9BWW9 433 aa11.57□□□□□ -0.56
HIF3A-219ENST00000600879 LMAN2LQ9H0V9 348 aa11.57□□□□□ -0.56
HIF3A-219ENST00000600879 PLAGL2Q9UPG8 496 aa11.57□□□□□ -0.56
HIF3A-219ENST00000600879 MRPL42Q9Y6G3 142 aaKnown RBP11.57□□□□□ -0.56
HIF3A-219ENST00000600879 RALGAPA2Q2PPJ7 1873 aa11.57□□□□□ -0.56
HIF3A-219ENST00000600879 TRIM6-TRIM34B2RNG4 842 aa11.56□□□□□ -0.56
HIF3A-219ENST00000600879 PPP1R11O60927 126 aaPredicted RBP11.56□□□□□ -0.56
HIF3A-219ENST00000600879 MMP1P03956 469 aa11.56□□□□□ -0.56
HIF3A-219ENST00000600879 ITGB1P05556 798 aa11.56□□□□□ -0.56
HIF3A-219ENST00000600879 PARP1P09874 1014 aaKnown RBP11.56□□□□□ -0.56
HIF3A-219ENST00000600879 HOXC8P31273 242 aa11.56□□□□□ -0.56
HIF3A-219ENST00000600879 GATMP50440 423 aa11.56□□□□□ -0.56
HIF3A-219ENST00000600879 ARHGAP4P98171 946 aa11.56□□□□□ -0.56
HIF3A-219ENST00000600879 SIGLEC14Q08ET2 396 aa11.56□□□□□ -0.56
HIF3A-219ENST00000600879 ASPRV1Q53RT3 343 aa11.56□□□□□ -0.56
HIF3A-219ENST00000600879 RUFY4Q6ZNE9 571 aa11.56□□□□□ -0.56
HIF3A-219ENST00000600879 VSIG10LQ86VR7 867 aa11.56□□□□□ -0.56
HIF3A-219ENST00000600879 DGKHQ86XP1 1220 aa11.56□□□□□ -0.56
HIF3A-219ENST00000600879 STAG2Q8N3U4 1231 aa11.56□□□□□ -0.56
HIF3A-219ENST00000600879 SMRP1Q8NCR6 262 aa11.56□□□□□ -0.56
HIF3A-219ENST00000600879 APBB2Q92870 758 aa11.56□□□□□ -0.56
HIF3A-219ENST00000600879 ZBTB10Q96DT7 871 aa11.56□□□□□ -0.56
HIF3A-219ENST00000600879 SMOC2Q9H3U7 446 aa11.56□□□□□ -0.56
HIF3A-219ENST00000600879 CDH22Q9UJ99 828 aa11.56□□□□□ -0.56
HIF3A-219ENST00000600879 PCDHB15Q9Y5E8 787 aa11.56□□□□□ -0.56
HIF3A-219ENST00000600879 ZDBF2Q9HCK1 2354 aa11.56□□□□□ -0.56
HIF3A-219ENST00000600879 B4E1Z4 1266 aa11.55□□□□□ -0.56
HIF3A-219ENST00000600879 CAND2O75155 1236 aa11.55□□□□□ -0.56
HIF3A-219ENST00000600879 EYA4O95677 639 aa11.55□□□□□ -0.56
HIF3A-219ENST00000600879 CHRNA1P02708 482 aa11.55□□□□□ -0.56
HIF3A-219ENST00000600879 CCND2P30279 289 aa11.55□□□□□ -0.56
HIF3A-219ENST00000600879 KCNV1Q6PIU1 500 aa11.55□□□□□ -0.56
HIF3A-219ENST00000600879 CYFIP1Q7L576 1253 aa11.55□□□□□ -0.56
HIF3A-219ENST00000600879 HOMER1Q86YM7 354 aa11.55□□□□□ -0.56
HIF3A-219ENST00000600879 VN1R2Q8NFZ6 395 aa11.55□□□□□ -0.56
HIF3A-219ENST00000600879 LMBR1Q8WVP7 490 aa11.55□□□□□ -0.56
HIF3A-219ENST00000600879 PRRX2Q99811 253 aa11.55□□□□□ -0.56
HIF3A-219ENST00000600879 AMNQ9BXJ7 453 aa11.55□□□□□ -0.56
HIF3A-219ENST00000600879 MAF1Q9H063 256 aa11.55□□□□□ -0.56
HIF3A-219ENST00000600879 RNF41Q9H4P4 317 aaPredicted RBP11.55□□□□□ -0.56
HIF3A-219ENST00000600879 RC3H2Q9HBD1 1191 aaKnown RBP11.55□□□□□ -0.56
HIF3A-219ENST00000600879 RWDD3Q9Y3V2 267 aa11.55□□□□□ -0.56
HIF3A-219ENST00000600879 PCDHA1Q9Y5I3 950 aa11.55□□□□□ -0.56
HIF3A-219ENST00000600879 SALL3Q9BXA9 1300 aa11.55□□□□□ -0.56
HIF3A-219ENST00000600879 PLXNA3P51805 1871 aa11.55□□□□□ -0.56
HIF3A-219ENST00000600879 CACNA1AO00555 2505 aa11.54□□□□□ -0.56
HIF3A-219ENST00000600879 PRR23AA6NEV1 266 aa11.54□□□□□ -0.56
HIF3A-219ENST00000600879 ENPP3O14638 875 aa11.54□□□□□ -0.56
HIF3A-219ENST00000600879 ARP10275 920 aa11.54□□□□□ -0.56
HIF3A-219ENST00000600879 GNAT1P11488 350 aa11.54□□□□□ -0.56
HIF3A-219ENST00000600879 LPIN1Q14693 890 aa11.54□□□□□ -0.56
HIF3A-219ENST00000600879 CBX2Q14781 532 aaPredicted RBP11.54□□□□□ -0.56
HIF3A-219ENST00000600879 STOX1Q6ZVD7 989 aa11.54□□□□□ -0.56
HIF3A-219ENST00000600879 IQCA1Q86XH1 822 aa11.54□□□□□ -0.56
HIF3A-219ENST00000600879 EFHBQ8N7U6 833 aa11.54□□□□□ -0.56
HIF3A-219ENST00000600879 ENAHQ8N8S7 591 aaPredicted RBP11.54□□□□□ -0.56
HIF3A-219ENST00000600879 KLHL23Q8NBE8 558 aa11.54□□□□□ -0.56
HIF3A-219ENST00000600879 SPPL3Q8TCT6 385 aa11.54□□□□□ -0.56
HIF3A-219ENST00000600879 LINC01599Q8WXQ3 324 aa11.54□□□□□ -0.56
HIF3A-219ENST00000600879 CLP1Q92989 425 aaKnown RBP11.54□□□□□ -0.56
HIF3A-219ENST00000600879 ZSCAN10Q96SZ4 725 aaPredicted RBP11.54□□□□□ -0.56
HIF3A-219ENST00000600879 GPR20Q99678 358 aa11.54□□□□□ -0.56
HIF3A-219ENST00000600879 RTEL1Q9NZ71 1219 aa11.54□□□□□ -0.56
HIF3A-219ENST00000600879 TRPC6Q9Y210 931 aa11.54□□□□□ -0.56
HIF3A-219ENST00000600879 ZMYM6O95789 1325 aa11.54□□□□□ -0.56
HIF3A-219ENST00000600879 ZNF213O14771 459 aa11.53□□□□□ -0.56
HIF3A-219ENST00000600879 PCP11498 1178 aaKnown RBP11.53□□□□□ -0.56
HIF3A-219ENST00000600879 FOXK2Q01167 660 aa11.53□□□□□ -0.56
HIF3A-219ENST00000600879 COASYQ13057 564 aa11.53□□□□□ -0.56
HIF3A-219ENST00000600879 PKN1Q16512 942 aa11.53□□□□□ -0.56
HIF3A-219ENST00000600879 PTPN21Q16825 1174 aa11.53□□□□□ -0.56
HIF3A-219ENST00000600879 FAM26DQ5JW98 314 aa11.53□□□□□ -0.56
HIF3A-219ENST00000600879 ANKRD45Q5TZF3 282 aa11.53□□□□□ -0.56
HIF3A-219ENST00000600879 ERICH6BQ5W0A0 696 aa11.53□□□□□ -0.56
HIF3A-219ENST00000600879 FRMD5Q7Z6J6 570 aa11.53□□□□□ -0.56
HIF3A-219ENST00000600879 ZBTB33Q86T24 672 aa11.53□□□□□ -0.56
HIF3A-219ENST00000600879 TMEM105Q8N8V8 129 aa11.53□□□□□ -0.56
HIF3A-219ENST00000600879 POF1BQ8WVV4 589 aa11.53□□□□□ -0.56
HIF3A-219ENST00000600879 RILPL2Q969X0 211 aa11.53□□□□□ -0.56
HIF3A-219ENST00000600879 PHF7Q9BWX1 381 aaPredicted RBP11.53□□□□□ -0.56
HIF3A-219ENST00000600879 USP26Q9BXU7 913 aa11.53□□□□□ -0.56
HIF3A-219ENST00000600879 TSHZ2Q9NRE2 1034 aa11.53□□□□□ -0.56
HIF3A-219ENST00000600879 ZBTB47Q9UFB7 747 aaPredicted RBP11.53□□□□□ -0.56
HIF3A-219ENST00000600879 SPTBN4Q9H254 2564 aa11.53□□□□□ -0.56
HIF3A-219ENST00000600879 MYH6P13533 1939 aa11.52□□□□□ -0.56
HIF3A-219ENST00000600879 DCHS1Q96JQ0 3298 aa11.52□□□□□ -0.56
HIF3A-219ENST00000600879 KLRF2D3W0D1 207 aa11.52□□□□□ -0.57
HIF3A-219ENST00000600879 GCOM1H8Y6P7 765 aaPredicted RBP11.52□□□□□ -0.57
HIF3A-219ENST00000600879 ZBTB5O15062 677 aa11.52□□□□□ -0.57
HIF3A-219ENST00000600879 DGKIO75912 1065 aa11.52□□□□□ -0.57
HIF3A-219ENST00000600879 POLR2MP0CAP2 368 aa11.52□□□□□ -0.57
HIF3A-219ENST00000600879 TGFB3P10600 412 aa11.52□□□□□ -0.57
HIF3A-219ENST00000600879 MARK3P27448 753 aa11.52□□□□□ -0.57
HIF3A-219ENST00000600879 CD52P31358 61 aa11.52□□□□□ -0.57
HIF3A-219ENST00000600879 ADAM17P78536 824 aa11.52□□□□□ -0.57
HIF3A-219ENST00000600879 MRPS9P82933 396 aaKnown RBP11.52□□□□□ -0.57
HIF3A-219ENST00000600879 GHRHRQ02643 423 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms