RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 MCMDC2Q4G0Z9 681 aa11.78□□□□□ -0.52
SMCO4P1-201ENST00000592909 ADGRD2Q7Z7M1 963 aa11.78□□□□□ -0.52
SMCO4P1-201ENST00000592909 TICAM2Q86XR7 235 aa11.78□□□□□ -0.52
SMCO4P1-201ENST00000592909 TBC1D10CQ8IV04 446 aa11.78□□□□□ -0.52
SMCO4P1-201ENST00000592909 CMTR2Q8IYT2 770 aaKnown RBP11.78□□□□□ -0.52
SMCO4P1-201ENST00000592909 IL31RAQ8NI17 732 aa11.78□□□□□ -0.52
SMCO4P1-201ENST00000592909 GPKOWQ92917 476 aaPredicted RBP eCLIP11.78□□□□□ -0.52
SMCO4P1-201ENST00000592909 EVI5LQ96CN4 794 aa11.78□□□□□ -0.52
SMCO4P1-201ENST00000592909 ZKSCAN3Q9BRR0 538 aa11.78□□□□□ -0.52
SMCO4P1-201ENST00000592909 RNF41Q9H4P4 317 aaPredicted RBP11.78□□□□□ -0.52
SMCO4P1-201ENST00000592909 BCAS3Q9H6U6 928 aa11.78□□□□□ -0.52
SMCO4P1-201ENST00000592909 SPTBN4Q9H254 2564 aa11.78□□□□□ -0.52
SMCO4P1-201ENST00000592909 RALGAPA2Q2PPJ7 1873 aa11.78□□□□□ -0.52
SMCO4P1-201ENST00000592909 KIAA1217Q5T5P2 1943 aa11.78□□□□□ -0.52
SMCO4P1-201ENST00000592909 NOP56O00567 594 aaKnown RBP11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 CSPG5O95196 566 aa11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 GLP2RO95838 553 aa11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 PARP1P09874 1014 aaKnown RBP11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 GHRP10912 638 aa11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 CCND2P30279 289 aa11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 MGAT3Q09327 533 aa11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 LPIN1Q14693 890 aa11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 C20orf194Q5TEA3 1177 aa11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 TAF2Q6P1X5 1199 aa11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 METTL7BQ6UX53 244 aa11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 CRIPAKQ8N1N5 446 aa11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 LMBR1Q8WVP7 490 aa11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 SUSD6Q92537 303 aa11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 MTMR8Q96EF0 704 aa11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 RPGRIP1Q96KN7 1286 aa11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 GPR20Q99678 358 aa11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 KAT14Q9H8E8 782 aa11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 VAT1LQ9HCJ6 419 aa11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 BARX2Q9UMQ3 279 aaPredicted RBP11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 MRPL42Q9Y6G3 142 aaKnown RBP11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 NRCAMQ92823 1304 aa11.77□□□□□ -0.53
SMCO4P1-201ENST00000592909 CFAP54Q96N23 3096 aa11.76□□□□□ -0.53
SMCO4P1-201ENST00000592909 FAM186AA6NE01 2351 aa11.76□□□□□ -0.53
SMCO4P1-201ENST00000592909 CACNA1AO00555 2505 aa11.76□□□□□ -0.53
SMCO4P1-201ENST00000592909 H0Y858 1186 aa11.76□□□□□ -0.53
SMCO4P1-201ENST00000592909 GALR2O43603 387 aaPredicted RBP11.76□□□□□ -0.53
SMCO4P1-201ENST00000592909 DHX16O60231 1041 aaKnown RBP11.76□□□□□ -0.53
SMCO4P1-201ENST00000592909 NRIP1P48552 1158 aa11.76□□□□□ -0.53
SMCO4P1-201ENST00000592909 ARHGAP4P98171 946 aa11.76□□□□□ -0.53
SMCO4P1-201ENST00000592909 NEDD9Q14511 834 aa11.76□□□□□ -0.53
SMCO4P1-201ENST00000592909 PTPN21Q16825 1174 aa11.76□□□□□ -0.53
SMCO4P1-201ENST00000592909 ERMP1Q7Z2K6 904 aa11.76□□□□□ -0.53
SMCO4P1-201ENST00000592909 IQCA1Q86XH1 822 aa11.76□□□□□ -0.53
SMCO4P1-201ENST00000592909 KLHL23Q8NBE8 558 aa11.76□□□□□ -0.53
SMCO4P1-201ENST00000592909 POF1BQ8WVV4 589 aa11.76□□□□□ -0.53
SMCO4P1-201ENST00000592909 FAM227BQ96M60 508 aa11.76□□□□□ -0.53
SMCO4P1-201ENST00000592909 TLR9Q9NR96 1032 aa11.76□□□□□ -0.53
SMCO4P1-201ENST00000592909 ZNF215Q9UL58 517 aaPredicted RBP11.76□□□□□ -0.53
SMCO4P1-201ENST00000592909 SALL3Q9BXA9 1300 aa11.76□□□□□ -0.53
SMCO4P1-201ENST00000592909 NLRC5Q86WI3 1866 aa11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 A0A0D9SFI3 127 aa11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 SPATA31C2B4DYI2 1134 aa11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 PPP1R11O60927 126 aaPredicted RBP11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 STAM2O75886 525 aa11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 HOXA13P31271 388 aaPredicted RBP11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 GNPTABQ3T906 1256 aa11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 FBXO47Q5MNV8 452 aa11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 TSHZ1Q6ZSZ6 1077 aa11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 CYFIP1Q7L576 1253 aa11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 ASCL5Q7RTU5 278 aa11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 RBM23Q86U06 439 aaKnown RBP11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 RSPH3Q86UC2 560 aa11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 ZNF589Q86UQ0 364 aaPredicted RBP11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 ATP8B4Q8TF62 1192 aa11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 ZFP91Q96JP5 570 aaPredicted RBP11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 RIPOR3Q96MK2 946 aa11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 INPP4AQ96PE3 977 aaPredicted RBP11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 TLE6Q9H808 572 aa11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 PCDHA1Q9Y5I3 950 aa11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 NEDD4P46934 1319 aa11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 C5orf42Q9H799 3197 aa11.75□□□□□ -0.53
SMCO4P1-201ENST00000592909 TTC3P53804 2025 aa11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 FSD2A1L4K1 749 aa11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 PRR23AA6NEV1 266 aa11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 GCOM1H8Y6P7 765 aaPredicted RBP11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 ZBTB5O15062 677 aa11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 POLR2MP0CAP2 368 aa11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 NBL1P41271 181 aa11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 MRPS9P82933 396 aaKnown RBP11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 SEMA3FQ13275 785 aa11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 RUFY4Q6ZNE9 571 aa11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 RTN4RL1Q86UN2 441 aaPredicted RBP11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 TRIM50Q86XT4 487 aa11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 NPAS4Q8IUM7 802 aa11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 ENAHQ8N8S7 591 aaPredicted RBP11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 LINC01599Q8WXQ3 324 aa11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 ZSCAN10Q96SZ4 725 aaPredicted RBP11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 CDCA3Q99618 268 aaPredicted RBP11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 FTHL17Q9BXU8 183 aa11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 AGO3Q9H9G7 860 aaKnown RBP11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 RCAN3Q9UKA8 241 aa11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 TRPC6Q9Y210 931 aa11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 SUPT16HQ9Y5B9 1047 aaKnown RBP11.74□□□□□ -0.53
SMCO4P1-201ENST00000592909 MBLAC1A4D2B0 266 aaPredicted RBP11.73□□□□□ -0.53
SMCO4P1-201ENST00000592909 MYH7BA7E2Y1 1941 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms