RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 USB1Q9BQ65 265 aaKnown RBP10.95□□□□□ -0.66
BRCA1-226ENST00000591534 DSCC1Q9BVC3 393 aa10.95□□□□□ -0.66
BRCA1-226ENST00000591534 OSBPL3Q9H4L5 887 aa10.95□□□□□ -0.66
BRCA1-226ENST00000591534 VAT1LQ9HCJ6 419 aa10.95□□□□□ -0.66
BRCA1-226ENST00000591534 GTF2IRD1Q9UHL9 959 aa10.95□□□□□ -0.66
BRCA1-226ENST00000591534 MTCH2Q9Y6C9 303 aa10.95□□□□□ -0.66
BRCA1-226ENST00000591534 NEDD4P46934 1319 aa10.94□□□□□ -0.66
BRCA1-226ENST00000591534 EMSYQ7Z589 1322 aa10.94□□□□□ -0.66
BRCA1-226ENST00000591534 PPFIA4O75335 1185 aa10.94□□□□□ -0.66
BRCA1-226ENST00000591534 ARIH2O95376 493 aa10.94□□□□□ -0.66
BRCA1-226ENST00000591534 CFBP00751 764 aa10.94□□□□□ -0.66
BRCA1-226ENST00000591534 NR3C2P08235 984 aa10.94□□□□□ -0.66
BRCA1-226ENST00000591534 TGFB3P10600 412 aa10.94□□□□□ -0.66
BRCA1-226ENST00000591534 BMP1P13497 986 aa10.94□□□□□ -0.66
BRCA1-226ENST00000591534 COPS2P61201 443 aa10.94□□□□□ -0.66
BRCA1-226ENST00000591534 TAP1Q03518 808 aa10.94□□□□□ -0.66
BRCA1-226ENST00000591534 ARHGAP1Q07960 439 aa10.94□□□□□ -0.66
BRCA1-226ENST00000591534 RBL2Q08999 1139 aa10.94□□□□□ -0.66
BRCA1-226ENST00000591534 PTK7Q13308 1070 aa10.94□□□□□ -0.66
BRCA1-226ENST00000591534 QRICH1Q2TAL8 776 aa10.94□□□□□ -0.66
BRCA1-226ENST00000591534 THSD4Q6ZMP0 1018 aa10.94□□□□□ -0.66
BRCA1-226ENST00000591534 VWCEQ96DN2 955 aa10.94□□□□□ -0.66
BRCA1-226ENST00000591534 RAD9AQ99638 391 aa10.94□□□□□ -0.66
BRCA1-226ENST00000591534 CERS4Q9HA82 394 aa10.94□□□□□ -0.66
BRCA1-226ENST00000591534 DDX41Q9UJV9 622 aaKnown RBP10.94□□□□□ -0.66
BRCA1-226ENST00000591534 MUC3AQ02505 3323 aa10.94□□□□□ -0.66
BRCA1-226ENST00000591534 LRRC37A2A6NM11 1700 aa10.93□□□□□ -0.66
BRCA1-226ENST00000591534 ERICH2A1L162 156 aa10.93□□□□□ -0.66
BRCA1-226ENST00000591534 B4E1Z4 1266 aa10.93□□□□□ -0.66
BRCA1-226ENST00000591534 CKBP12277 381 aa10.93□□□□□ -0.66
BRCA1-226ENST00000591534 EIF2AK2P19525 551 aaKnown RBP10.93□□□□□ -0.66
BRCA1-226ENST00000591534 WDR5P61964 334 aaKnown RBP10.93□□□□□ -0.66
BRCA1-226ENST00000591534 VAC14Q08AM6 782 aa10.93□□□□□ -0.66
BRCA1-226ENST00000591534 GDF6Q6KF10 455 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-226ENST00000591534 ENAHQ8N8S7 591 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-226ENST00000591534 JMJD4Q9H9V9 463 aa10.93□□□□□ -0.66
BRCA1-226ENST00000591534 PXMP2Q9NR77 195 aa10.93□□□□□ -0.66
BRCA1-226ENST00000591534 ZSWIM5Q9P217 1185 aa10.93□□□□□ -0.66
BRCA1-226ENST00000591534 KLRF2D3W0D1 207 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 RFXAPO00287 272 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 ZBTB5O15062 677 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 NR1I2O75469 434 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 F2P00734 622 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 CXCL10P02778 98 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 MYCLP12524 364 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-226ENST00000591534 HSD17B4P51659 736 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 SART3Q15020 963 aaKnown RBP10.92□□□□□ -0.66
BRCA1-226ENST00000591534 KIAA0753Q2KHM9 967 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 GNPTABQ3T906 1256 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 LYPD8Q6UX82 237 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 SKAP1Q86WV1 359 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 KAT2BQ92831 832 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 SPATA33Q96N06 139 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 TGS1Q96RS0 853 aaKnown RBP10.92□□□□□ -0.66
BRCA1-226ENST00000591534 ALG1Q9BT22 464 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 IL25Q9H293 177 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 CPVLQ9H3G5 476 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 MLXIPQ9HAP2 919 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 CHD7Q9P2D1 2997 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 HDAC6Q9UBN7 1215 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 PCDHA1Q9Y5I3 950 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 LAMA4Q16363 1823 aa10.92□□□□□ -0.66
BRCA1-226ENST00000591534 GCOM1H8Y6P7 765 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-226ENST00000591534 STAM2O75886 525 aa10.91□□□□□ -0.66
BRCA1-226ENST00000591534 GJB5O95377 273 aa10.91□□□□□ -0.66
BRCA1-226ENST00000591534 AMHP03971 560 aa10.91□□□□□ -0.66
BRCA1-226ENST00000591534 POLR2MP0CAP2 368 aa10.91□□□□□ -0.66
BRCA1-226ENST00000591534 GNAT1P11488 350 aa10.91□□□□□ -0.66
BRCA1-226ENST00000591534 GSPT1P15170 499 aaKnown RBP10.91□□□□□ -0.66
BRCA1-226ENST00000591534 CCND2P30279 289 aa10.91□□□□□ -0.66
BRCA1-226ENST00000591534 GHRHRQ02643 423 aa10.91□□□□□ -0.66
BRCA1-226ENST00000591534 TFF2Q03403 129 aa10.91□□□□□ -0.66
BRCA1-226ENST00000591534 GRB10Q13322 594 aa10.91□□□□□ -0.66
BRCA1-226ENST00000591534 CELF3Q5SZQ8 465 aaKnown RBP10.91□□□□□ -0.66
BRCA1-226ENST00000591534 STOX1Q6ZVD7 989 aa10.91□□□□□ -0.66
BRCA1-226ENST00000591534 PPP1R13LQ8WUF5 828 aa10.91□□□□□ -0.66
BRCA1-226ENST00000591534 RUFY2Q8WXA3 655 aa10.91□□□□□ -0.66
BRCA1-226ENST00000591534 TBC1D5Q92609 795 aa10.91□□□□□ -0.66
BRCA1-226ENST00000591534 CCDC97Q96F63 343 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-226ENST00000591534 CALR3Q96L12 384 aaKnown RBP10.91□□□□□ -0.66
BRCA1-226ENST00000591534 COL20A1Q9P218 1284 aa10.91□□□□□ -0.66
BRCA1-226ENST00000591534 INSL6Q9Y581 213 aa10.91□□□□□ -0.66
BRCA1-226ENST00000591534 C17orf102A2RUQ5 167 aa10.9□□□□□ -0.66
BRCA1-226ENST00000591534 HAS3O00219 553 aa10.9□□□□□ -0.66
BRCA1-226ENST00000591534 NOP56O00567 594 aaKnown RBP10.9□□□□□ -0.66
BRCA1-226ENST00000591534 CAND2O75155 1236 aa10.9□□□□□ -0.66
BRCA1-226ENST00000591534 LGR5O75473 907 aa10.9□□□□□ -0.66
BRCA1-226ENST00000591534 GGPS1O95749 300 aa10.9□□□□□ -0.66
BRCA1-226ENST00000591534 KCNQ1P51787 676 aa10.9□□□□□ -0.66
BRCA1-226ENST00000591534 PTPROQ16827 1216 aa10.9□□□□□ -0.66
BRCA1-226ENST00000591534 DESI1Q6ICB0 168 aa10.9□□□□□ -0.66
BRCA1-226ENST00000591534 VSIG10LQ86VR7 867 aa10.9□□□□□ -0.66
BRCA1-226ENST00000591534 GLMNQ92990 594 aa10.9□□□□□ -0.66
BRCA1-226ENST00000591534 FAM122AQ96E09 287 aa10.9□□□□□ -0.66
BRCA1-226ENST00000591534 SAMD11Q96NU1 681 aa10.9□□□□□ -0.66
BRCA1-226ENST00000591534 PDCD2LQ9BRP1 358 aa10.9□□□□□ -0.66
BRCA1-226ENST00000591534 XIRP2A4UGR9 3374 aa10.9□□□□□ -0.66
BRCA1-226ENST00000591534 SCN10AQ9Y5Y9 1956 aa10.89□□□□□ -0.67
BRCA1-226ENST00000591534 RSPH10B2B2RC85 870 aa10.89□□□□□ -0.67
BRCA1-226ENST00000591534 NBNO60934 754 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms