RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 MGAT3Q09327 533 aa22.55■■□□□ 1.2
PTBP1-208ENST00000585956 NEDD9Q14511 834 aa22.55■■□□□ 1.2
PTBP1-208ENST00000585956 GNPTABQ3T906 1256 aa22.55■■□□□ 1.2
PTBP1-208ENST00000585956 PCNX4Q63HM2 1172 aa22.55■■□□□ 1.2
PTBP1-208ENST00000585956 PTCRAQ6ISU1 281 aaPredicted RBP22.55■■□□□ 1.2
PTBP1-208ENST00000585956 TMEM192Q8IY95 271 aa22.55■■□□□ 1.2
PTBP1-208ENST00000585956 ZNF654Q8IZM8 581 aa22.55■■□□□ 1.2
PTBP1-208ENST00000585956 NEK9Q8TD19 979 aa22.55■■□□□ 1.2
PTBP1-208ENST00000585956 GSTTP1A0A1W2PQM5 241 aa22.54■■□□□ 1.2
PTBP1-208ENST00000585956 GHRP10912 638 aa22.54■■□□□ 1.2
PTBP1-208ENST00000585956 GPM6BQ13491 265 aa22.54■■□□□ 1.2
PTBP1-208ENST00000585956 UBE2SQ16763 222 aa22.54■■□□□ 1.2
PTBP1-208ENST00000585956 CATIPQ7Z7H3 387 aa22.54■■□□□ 1.2
PTBP1-208ENST00000585956 RALYLQ86SE5 291 aaKnown RBP22.54■■□□□ 1.2
PTBP1-208ENST00000585956 LINC01599Q8WXQ3 324 aa22.54■■□□□ 1.2
PTBP1-208ENST00000585956 MAP4K1Q92918 833 aa22.54■■□□□ 1.2
PTBP1-208ENST00000585956 SPZ1Q9BXG8 430 aa22.54■■□□□ 1.2
PTBP1-208ENST00000585956 IFIH1Q9BYX4 1025 aaKnown RBP22.54■■□□□ 1.2
PTBP1-208ENST00000585956 RC3H2Q9HBD1 1191 aaKnown RBP22.54■■□□□ 1.2
PTBP1-208ENST00000585956 PKD2L1Q9P0L9 805 aa22.54■■□□□ 1.2
PTBP1-208ENST00000585956 RBM8AQ9Y5S9 174 aaKnown RBP22.54■■□□□ 1.2
PTBP1-208ENST00000585956 KAT6AQ92794 2004 aa22.53■■□□□ 1.2
PTBP1-208ENST00000585956 ERICH2A1L162 156 aa22.53■■□□□ 1.2
PTBP1-208ENST00000585956 GRXCR2A6NFK2 248 aa22.53■■□□□ 1.2
PTBP1-208ENST00000585956 GPR37L1O60883 481 aa22.53■■□□□ 1.2
PTBP1-208ENST00000585956 MARK3P27448 753 aa22.53■■□□□ 1.2
PTBP1-208ENST00000585956 LPIN1Q14693 890 aa22.53■■□□□ 1.2
PTBP1-208ENST00000585956 COL19A1Q14993 1142 aa22.53■■□□□ 1.2
PTBP1-208ENST00000585956 MARCH8Q5T0T0 291 aa22.53■■□□□ 1.2
PTBP1-208ENST00000585956 BANK1Q8NDB2 785 aa22.53■■□□□ 1.2
PTBP1-208ENST00000585956 SMARCC2Q8TAQ2 1214 aa22.53■■□□□ 1.2
PTBP1-208ENST00000585956 EHMT1Q9H9B1 1298 aa22.53■■□□□ 1.2
PTBP1-208ENST00000585956 PIK3CDO00329 1044 aa22.52■■□□□ 1.2
PTBP1-208ENST00000585956 CAND2O75155 1236 aa22.52■■□□□ 1.2
PTBP1-208ENST00000585956 STAM2O75886 525 aa22.52■■□□□ 1.2
PTBP1-208ENST00000585956 TCF7P36402 384 aaPredicted RBP22.52■■□□□ 1.2
PTBP1-208ENST00000585956 LTBRP36941 435 aa22.52■■□□□ 1.2
PTBP1-208ENST00000585956 IRX6P78412 446 aaPredicted RBP22.52■■□□□ 1.2
PTBP1-208ENST00000585956 GJD3Q8N144 294 aa22.52■■□□□ 1.2
PTBP1-208ENST00000585956 PCYT2Q99447 389 aa22.52■■□□□ 1.2
PTBP1-208ENST00000585956 MUC6Q6W4X9 2439 aa22.52■■□□□ 1.2
PTBP1-208ENST00000585956 KIAA1671Q9BY89 1806 aa22.52■■□□□ 1.2
PTBP1-208ENST00000585956 SH2B2O14492 632 aaPredicted RBP22.51■■□□□ 1.19
PTBP1-208ENST00000585956 GRM6O15303 877 aa22.51■■□□□ 1.19
PTBP1-208ENST00000585956 CSPG5O95196 566 aa22.51■■□□□ 1.19
PTBP1-208ENST00000585956 HOXD11P31277 338 aaPredicted RBP22.51■■□□□ 1.19
PTBP1-208ENST00000585956 DLX2Q07687 328 aaPredicted RBP22.51■■□□□ 1.19
PTBP1-208ENST00000585956 SENP7Q9BQF6 1050 aa22.51■■□□□ 1.19
PTBP1-208ENST00000585956 LRRC2Q9BYS8 371 aa22.51■■□□□ 1.19
PTBP1-208ENST00000585956 TTC3P53804 2025 aa22.5■■□□□ 1.19
PTBP1-208ENST00000585956 PRC1O43663 620 aa22.5■■□□□ 1.19
PTBP1-208ENST00000585956 DDAH1O94760 285 aa22.5■■□□□ 1.19
PTBP1-208ENST00000585956 GTF2F1P35269 517 aaKnown RBP eCLIP22.5■■□□□ 1.194e-8■□□□□ 9.6
PTBP1-208ENST00000585956 RRP36Q96EU6 259 aaKnown RBP22.5■■□□□ 1.19
PTBP1-208ENST00000585956 AGO3Q9H9G7 860 aaKnown RBP22.5■■□□□ 1.19
PTBP1-208ENST00000585956 ZNF215Q9UL58 517 aaPredicted RBP22.5■■□□□ 1.19
PTBP1-208ENST00000585956 LOXHD1Q8IVV2 1947 aa22.5■■□□□ 1.19
PTBP1-208ENST00000585956 POTEB3A0JP26 581 aa22.49■■□□□ 1.19
PTBP1-208ENST00000585956 TRAF1Q13077 416 aa22.49■■□□□ 1.19
PTBP1-208ENST00000585956 SART3Q15020 963 aaKnown RBP22.49■■□□□ 1.19
PTBP1-208ENST00000585956 GRIK4Q16099 956 aa22.49■■□□□ 1.19
PTBP1-208ENST00000585956 POTEBQ6S5H4 581 aa22.49■■□□□ 1.19
PTBP1-208ENST00000585956 DNAJB3Q8WWF6 145 aa22.49■■□□□ 1.19
PTBP1-208ENST00000585956 RUFY2Q8WXA3 655 aa22.49■■□□□ 1.19
PTBP1-208ENST00000585956 UBIAD1Q9Y5Z9 338 aa22.49■■□□□ 1.19
PTBP1-208ENST00000585956 NRCAMQ92823 1304 aa22.49■■□□□ 1.19
PTBP1-208ENST00000585956 MBLAC1A4D2B0 266 aaPredicted RBP22.48■■□□□ 1.19
PTBP1-208ENST00000585956 ENPP3O14638 875 aa22.48■■□□□ 1.19
PTBP1-208ENST00000585956 GNAT1P11488 350 aa22.48■■□□□ 1.19
PTBP1-208ENST00000585956 CTNNB1P35222 781 aa22.48■■□□□ 1.19
PTBP1-208ENST00000585956 PPFIA1Q13136 1202 aa22.48■■□□□ 1.19
PTBP1-208ENST00000585956 CAMK1Q14012 370 aa22.48■■□□□ 1.19
PTBP1-208ENST00000585956 TIGD5Q53EQ6 642 aa22.48■■□□□ 1.19
PTBP1-208ENST00000585956 FBXO47Q5MNV8 452 aa22.48■■□□□ 1.19
PTBP1-208ENST00000585956 RTN4RL1Q86UN2 441 aaPredicted RBP22.48■■□□□ 1.19
PTBP1-208ENST00000585956 CCDC82Q8N4S0 544 aa22.48■■□□□ 1.19
PTBP1-208ENST00000585956 CTCFLQ8NI51 663 aaPredicted RBP22.48■■□□□ 1.19
PTBP1-208ENST00000585956 CYP2W1Q8TAV3 490 aa22.48■■□□□ 1.19
PTBP1-208ENST00000585956 APBB2Q92870 758 aa22.48■■□□□ 1.19
PTBP1-208ENST00000585956 GPRASP2Q96D09 838 aa22.48■■□□□ 1.19
PTBP1-208ENST00000585956 PABPC5Q96DU9 382 aaKnown RBP22.48■■□□□ 1.19
PTBP1-208ENST00000585956 IL17RAQ96F46 866 aa22.48■■□□□ 1.19
PTBP1-208ENST00000585956 SAMD11Q96NU1 681 aa22.48■■□□□ 1.19
PTBP1-208ENST00000585956 MAP3K14Q99558 947 aa22.48■■□□□ 1.19
PTBP1-208ENST00000585956 LSG1Q9H089 658 aaKnown RBP22.48■■□□□ 1.19
PTBP1-208ENST00000585956 NSUN3Q9H649 340 aaKnown RBP22.48■■□□□ 1.19
PTBP1-208ENST00000585956 SSTR3P32745 418 aaPredicted RBP22.47■■□□□ 1.19
PTBP1-208ENST00000585956 HYAL1Q12794 435 aa22.47■■□□□ 1.19
PTBP1-208ENST00000585956 CLUL1Q15846 466 aa22.47■■□□□ 1.19
PTBP1-208ENST00000585956 PTPROQ16827 1216 aa22.47■■□□□ 1.19
PTBP1-208ENST00000585956 TYW1BQ6NUM6 668 aa22.47■■□□□ 1.19
PTBP1-208ENST00000585956 EP400NLQ6ZTU2 488 aa22.47■■□□□ 1.19
PTBP1-208ENST00000585956 RPAINQ86UA6 219 aa22.47■■□□□ 1.19
PTBP1-208ENST00000585956 CRIPAKQ8N1N5 446 aa22.47■■□□□ 1.19
PTBP1-208ENST00000585956 TRAPPC12Q8WVT3 735 aa22.47■■□□□ 1.19
PTBP1-208ENST00000585956 CUL5Q93034 780 aa22.47■■□□□ 1.19
PTBP1-208ENST00000585956 ZNF689Q96CS4 500 aaPredicted RBP22.47■■□□□ 1.19
PTBP1-208ENST00000585956 CDY2AQ9Y6F7 541 aa22.47■■□□□ 1.19
PTBP1-208ENST00000585956 ADGRA3Q8IWK6 1321 aa22.47■■□□□ 1.19
PTBP1-208ENST00000585956 C5orf67F2Z3F1 127 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms