RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 NOP56O00567 594 aaKnown RBP5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 LZTS3O60299 673 aaPredicted RBP5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 PPFIA4O75335 1185 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 STAM2O75886 525 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 MMP3P08254 477 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 CYP21A2P08686 494 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 IQCF3P0C7M6 154 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 PTGS1P23219 599 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 GNAQP50148 359 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 HSD17B4P51659 736 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 RAD51AP2Q09MP3 1159 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 GRM4Q14833 912 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 SEC23AQ15436 765 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 RASIP1Q5U651 963 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 CCDC62Q6P9F0 684 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 SYNE3Q6ZMZ3 975 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 CYB5R4Q7L1T6 521 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 FCHSD1Q86WN1 690 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 STAG2Q8N3U4 1231 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 PPTC7Q8NI37 304 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 CTCFLQ8NI51 663 aaPredicted RBP5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 SMARCC2Q8TAQ2 1214 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 PHOSPHO2Q8TCD6 241 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 AFAP1L1Q8TED9 768 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 RRP36Q96EU6 259 aaKnown RBP5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 SPATA33Q96N06 139 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 SLC9A7Q96T83 725 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 LZTS2Q9BRK4 669 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 ALG1Q9BT22 464 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 ZBED2Q9BTP6 218 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 NKX2-4Q9H2Z4 354 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 PRDM12Q9H4Q4 367 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 EGFL7Q9UHF1 273 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 MAD2L2Q9UI95 211 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 DDX41Q9UJV9 622 aaKnown RBP5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 TET1Q8NFU7 2136 aa5.38□□□□□ -1.55
HERPUD1-213ENST00000568358 SGSM2O43147 1006 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 EFCAB14O75071 495 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 BAIAP3O94812 1187 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 ARIH2O95376 493 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 CALM1P0DP23 149 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 CALM2P0DP24 149 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 CALM3P0DP25 149 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 GNAT1P11488 350 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 GSPT1P15170 499 aaKnown RBP5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 SELPP16109 830 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 SMARCA1P28370 1054 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 HOXA13P31271 388 aaPredicted RBP5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 MCM5P33992 734 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 FOSBP53539 338 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 RABGGTBP53611 331 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 IRX6P78412 446 aaPredicted RBP5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 PTH1RQ03431 593 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 ARHGAP1Q07960 439 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 PTK7Q13308 1070 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 IKBKEQ14164 716 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 NEDD9Q14511 834 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 PGM5Q15124 567 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 CCDC85BQ15834 202 aaPredicted RBP5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 KIAA0753Q2KHM9 967 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 AAK1Q2M2I8 961 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 CELF3Q5SZQ8 465 aaKnown RBP5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 RNF20Q5VTR2 975 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 STOX1Q6ZVD7 989 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 VSIG10LQ86VR7 867 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 SESTD1Q86VW0 696 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 GIMAP8Q8ND71 665 aaPredicted RBP5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 PIBF1Q8WXW3 757 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 MAP4K1Q92918 833 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 EMID1Q96A84 441 aaPredicted RBP5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 KCTD12Q96CX2 325 aaKnown RBP5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 TMEM87BQ96K49 555 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 PIGSQ96S52 555 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 MAP3K14Q99558 947 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 PDCD2LQ9BRP1 358 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 MTA3Q9BTC8 594 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 COL25A1Q9BXS0 654 aaPredicted RBP5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 WNT8AQ9H1J5 351 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 RIOX1Q9H6W3 641 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 CXXC1Q9P0U4 656 aaPredicted RBP5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 COL20A1Q9P218 1284 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 HDAC6Q9UBN7 1215 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 NOVA2Q9UNW9 492 aaKnown RBP5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 VPS9D1Q9Y2B5 631 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 SLC12A7Q9Y666 1083 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 UMODL1Q5DID0 1318 aa5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 LAMA2P24043 3122 aaKnown RBP5.37□□□□□ -1.55
HERPUD1-213ENST00000568358 ABHD14A-ACY1A0A1B0GW23 586 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 C17orf102A2RUQ5 167 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 PRC1O43663 620 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 TLL1O43897 1013 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 MARCH6O60337 910 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 SORBS3O60504 671 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 DDAH1O94760 285 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 GGPS1O95749 300 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 CKBP12277 381 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 SERPINB4P48594 390 aa5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 MRPS5P82675 430 aaKnown RBP5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 TAGLNQ01995 201 aaKnown RBP5.36□□□□□ -1.55
HERPUD1-213ENST00000568358 TROAPQ12815 778 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms