RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 ARHGAP4P98171 946 aa17.2■□□□□ 0.34
RNF40-209ENST00000566703 BMP2KLQ5H9B9 411 aa17.2■□□□□ 0.34
RNF40-209ENST00000566703 TRIM50Q86XT4 487 aa17.2■□□□□ 0.34
RNF40-209ENST00000566703 CMTR1Q8N1G2 835 aaKnown RBP17.2■□□□□ 0.34
RNF40-209ENST00000566703 LMBR1Q8WVP7 490 aa17.2■□□□□ 0.34
RNF40-209ENST00000566703 SMARCAD1Q9H4L7 1026 aa17.2■□□□□ 0.34
RNF40-209ENST00000566703 ANO2Q9NQ90 1003 aa17.2■□□□□ 0.34
RNF40-209ENST00000566703 RBM28Q9NW13 759 aaKnown RBP17.2■□□□□ 0.34
RNF40-209ENST00000566703 ERAP1Q9NZ08 941 aa17.2■□□□□ 0.34
RNF40-209ENST00000566703 CHD9Q3L8U1 2897 aa17.19■□□□□ 0.34
RNF40-209ENST00000566703 RPLP2P05387 115 aaKnown RBP17.19■□□□□ 0.34
RNF40-209ENST00000566703 RXRAP19793 462 aa17.19■□□□□ 0.34
RNF40-209ENST00000566703 KCNQ1P51787 676 aa17.19■□□□□ 0.34
RNF40-209ENST00000566703 SP4Q02446 784 aa17.19■□□□□ 0.34
RNF40-209ENST00000566703 MTMR1Q13613 665 aa17.19■□□□□ 0.34
RNF40-209ENST00000566703 COL9A3Q14050 684 aaPredicted RBP17.19■□□□□ 0.34
RNF40-209ENST00000566703 TSGA10IPQ3SY00 556 aa17.19■□□□□ 0.34
RNF40-209ENST00000566703 RSPH3Q86UC2 560 aa17.19■□□□□ 0.34
RNF40-209ENST00000566703 GDPD5Q8WTR4 605 aa17.19■□□□□ 0.34
RNF40-209ENST00000566703 TNPO1Q92973 898 aaKnown RBP17.19■□□□□ 0.34
RNF40-209ENST00000566703 NEK1Q96PY6 1258 aa17.19■□□□□ 0.34
RNF40-209ENST00000566703 TELO2Q9Y4R8 837 aa17.19■□□□□ 0.34
RNF40-209ENST00000566703 PTPRSQ13332 1948 aa17.18■□□□□ 0.34
RNF40-209ENST00000566703 FOSP01100 380 aaPredicted RBP17.18■□□□□ 0.34
RNF40-209ENST00000566703 CTSHP09668 335 aa17.18■□□□□ 0.34
RNF40-209ENST00000566703 CCDC82Q8N4S0 544 aa17.18■□□□□ 0.34
RNF40-209ENST00000566703 FBXO22Q8NEZ5 403 aa17.18■□□□□ 0.34
RNF40-209ENST00000566703 IFIH1Q9BYX4 1025 aaKnown RBP17.18■□□□□ 0.34
RNF40-209ENST00000566703 MTUS1Q9ULD2 1270 aa17.18■□□□□ 0.34
RNF40-209ENST00000566703 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.17■□□□□ 0.34
RNF40-209ENST00000566703 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.17■□□□□ 0.34
RNF40-209ENST00000566703 MBLAC1A4D2B0 266 aaPredicted RBP17.17■□□□□ 0.34
RNF40-209ENST00000566703 RRN3P2A6NIE6 340 aa17.17■□□□□ 0.34
RNF40-209ENST00000566703 CHRNA1P02708 482 aa17.17■□□□□ 0.34
RNF40-209ENST00000566703 EXOSC10Q01780 885 aaKnown RBP17.17■□□□□ 0.34
RNF40-209ENST00000566703 PPFIA1Q13136 1202 aa17.17■□□□□ 0.34
RNF40-209ENST00000566703 UBE2SQ16763 222 aa17.17■□□□□ 0.34
RNF40-209ENST00000566703 PPP1R18Q6NYC8 613 aa17.17■□□□□ 0.34
RNF40-209ENST00000566703 APOA5Q6Q788 366 aa17.17■□□□□ 0.34
RNF40-209ENST00000566703 DHX32Q7L7V1 743 aaKnown RBP17.17■□□□□ 0.34
RNF40-209ENST00000566703 HEATR3Q7Z4Q2 680 aa17.17■□□□□ 0.34
RNF40-209ENST00000566703 MICU3Q86XE3 530 aa17.17■□□□□ 0.34
RNF40-209ENST00000566703 GLG1Q92896 1179 aa17.17■□□□□ 0.34
RNF40-209ENST00000566703 MRPL38Q96DV4 380 aaKnown RBP17.17■□□□□ 0.34
RNF40-209ENST00000566703 YME1L1Q96TA2 773 aa17.17■□□□□ 0.34
RNF40-209ENST00000566703 MXRA8Q9BRK3 442 aa17.17■□□□□ 0.34
RNF40-209ENST00000566703 C17orf80Q9BSJ5 609 aa17.17■□□□□ 0.34
RNF40-209ENST00000566703 LRRC2Q9BYS8 371 aa17.17■□□□□ 0.34
RNF40-209ENST00000566703 OSBPL7Q9BZF2 842 aa17.17■□□□□ 0.34
RNF40-209ENST00000566703 GLT8D2Q9H1C3 349 aa17.17■□□□□ 0.34
RNF40-209ENST00000566703 TTC28Q96AY4 2481 aa17.16■□□□□ 0.34
RNF40-209ENST00000566703 hCG_1642624A0A1W2PR95 340 aa17.16■□□□□ 0.34
RNF40-209ENST00000566703 hCG_1984214I3L0E3 225 aa17.16■□□□□ 0.34
RNF40-209ENST00000566703 MGAT3Q09327 533 aa17.16■□□□□ 0.34
RNF40-209ENST00000566703 GRIK4Q16099 956 aa17.16■□□□□ 0.34
RNF40-209ENST00000566703 PTPROQ16827 1216 aa17.16■□□□□ 0.34
RNF40-209ENST00000566703 EPC2Q52LR7 807 aa17.16■□□□□ 0.34
RNF40-209ENST00000566703 RAB11FIP4Q86YS3 637 aa17.16■□□□□ 0.34
RNF40-209ENST00000566703 ZNF713Q8N859 430 aaPredicted RBP17.16■□□□□ 0.34
RNF40-209ENST00000566703 NECAB3Q96P71 396 aaPredicted RBP17.16■□□□□ 0.34
RNF40-209ENST00000566703 RIC8AQ9NPQ8 531 aa17.16■□□□□ 0.34
RNF40-209ENST00000566703 SQORQ9Y6N5 450 aa17.16■□□□□ 0.34
RNF40-209ENST00000566703 NFASCO94856 1347 aa17.16■□□□□ 0.34
RNF40-209ENST00000566703 H3BNC9 293 aa17.15■□□□□ 0.34
RNF40-209ENST00000566703 RCAN1P53805 252 aa17.15■□□□□ 0.34
RNF40-209ENST00000566703 FUT2Q10981 343 aa17.15■□□□□ 0.34
RNF40-209ENST00000566703 KRT32Q14532 448 aa17.15■□□□□ 0.34
RNF40-209ENST00000566703 MARCH8Q5T0T0 291 aa17.15■□□□□ 0.34
RNF40-209ENST00000566703 FAM43BQ6ZT52 329 aaPredicted RBP17.15■□□□□ 0.34
RNF40-209ENST00000566703 CENPQQ7L2Z9 268 aaPredicted RBP17.15■□□□□ 0.34
RNF40-209ENST00000566703 IL17RAQ96F46 866 aa17.15■□□□□ 0.34
RNF40-209ENST00000566703 C1QTNF1Q9BXJ1 281 aa17.15■□□□□ 0.34
RNF40-209ENST00000566703 JPH1Q9HDC5 661 aaPredicted RBP17.15■□□□□ 0.34
RNF40-209ENST00000566703 KCNH7Q9NS40 1196 aa17.15■□□□□ 0.34
RNF40-209ENST00000566703 SLC9A2Q9UBY0 812 aa17.15■□□□□ 0.34
RNF40-209ENST00000566703 TUBE1Q9UJT0 475 aa17.15■□□□□ 0.34
RNF40-209ENST00000566703 CHD7Q9P2D1 2997 aa17.14■□□□□ 0.33
RNF40-209ENST00000566703 ZBTB43O43298 467 aa17.14■□□□□ 0.33
RNF40-209ENST00000566703 UPP2O95045 317 aa17.14■□□□□ 0.33
RNF40-209ENST00000566703 RB1P06400 928 aa17.14■□□□□ 0.33
RNF40-209ENST00000566703 HMGB1P09429 215 aaKnown RBP17.14■□□□□ 0.33
RNF40-209ENST00000566703 COL9A1P20849 921 aa17.14■□□□□ 0.33
RNF40-209ENST00000566703 RTN1Q16799 776 aa17.14■□□□□ 0.33
RNF40-209ENST00000566703 WWC2Q6AWC2 1192 aa17.14■□□□□ 0.33
RNF40-209ENST00000566703 RUFY4Q6ZNE9 571 aa17.14■□□□□ 0.33
RNF40-209ENST00000566703 PLPPR4Q7Z2D5 763 aa17.14■□□□□ 0.33
RNF40-209ENST00000566703 TMEM192Q8IY95 271 aa17.14■□□□□ 0.33
RNF40-209ENST00000566703 SDF4Q9BRK5 362 aa17.14■□□□□ 0.33
RNF40-209ENST00000566703 AZI2Q9H6S1 392 aa17.14■□□□□ 0.33
RNF40-209ENST00000566703 UBE2ZQ9H832 354 aaPredicted RBP17.14■□□□□ 0.33
RNF40-209ENST00000566703 V9GY48 417 aaPredicted RBP17.14■□□□□ 0.33
RNF40-209ENST00000566703 CNTNAP5Q8WYK1 1306 aa17.14■□□□□ 0.33
RNF40-209ENST00000566703 MEIS1O00470 390 aa17.13■□□□□ 0.33
RNF40-209ENST00000566703 ENPP3O14638 875 aa17.13■□□□□ 0.33
RNF40-209ENST00000566703 INSRRP14616 1297 aa17.13■□□□□ 0.33
RNF40-209ENST00000566703 MARK3P27448 753 aa17.13■□□□□ 0.33
RNF40-209ENST00000566703 NAPAP54920 295 aa17.13■□□□□ 0.33
RNF40-209ENST00000566703 AP3B2Q13367 1082 aa17.13■□□□□ 0.33
RNF40-209ENST00000566703 GPM6BQ13491 265 aa17.13■□□□□ 0.33
RNF40-209ENST00000566703 LPIN1Q14693 890 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms