RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 IQCB1Q15051 598 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 PKN2Q16513 984 aaKnown RBP5.54□□□□□ -1.52
SCAF11-212ENST00000549162 ANKRD35Q8N283 1001 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 SYT2Q8N9I0 419 aaPredicted RBP5.54□□□□□ -1.52
SCAF11-212ENST00000549162 ENOX1Q8TC92 643 aaKnown RBP5.54□□□□□ -1.52
SCAF11-212ENST00000549162 TNPO1Q92973 898 aaKnown RBP5.54□□□□□ -1.52
SCAF11-212ENST00000549162 FATE1Q969F0 183 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 ARMC5Q96C12 935 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 DMGDHQ9UI17 866 aaKnown RBP5.54□□□□□ -1.52
SCAF11-212ENST00000549162 CNOT7Q9UIV1 285 aaKnown RBP5.54□□□□□ -1.52
SCAF11-212ENST00000549162 NDUFB10O96000 172 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 MGAT3Q09327 533 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 NR1H3Q13133 447 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 IL17AQ16552 155 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 CERKLQ49MI3 558 aaPredicted RBP5.54□□□□□ -1.52
SCAF11-212ENST00000549162 CCDC183Q5T5S1 534 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 IFIT1BQ5T764 474 aaKnown RBP5.54□□□□□ -1.52
SCAF11-212ENST00000549162 ANO1Q5XXA6 986 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 TAS1R3Q7RTX0 852 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 BNIPLQ7Z465 357 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 RGL4Q8IZJ4 473 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 UBXN6Q9BZV1 441 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 TTYH3Q9C0H2 523 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 THAP9Q9H5L6 903 aa5.54□□□□□ -1.52
SCAF11-212ENST00000549162 B4DLN1 442 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 TMEM189-UBE2V1I3L0A0 370 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 FAM155BO75949 473 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 WEE2P0C1S8 567 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 CHRNA5P30532 468 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 EPHX2P34913 555 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 ANP32AP39687 249 aaKnown RBP5.53□□□□□ -1.52
SCAF11-212ENST00000549162 MRPL12P52815 198 aaKnown RBP5.53□□□□□ -1.52
SCAF11-212ENST00000549162 TRDNQ13061 729 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 KIAA1755Q5JYT7 1200 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 CENPPQ6IPU0 288 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 ADGRF4Q8IZF3 695 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 RDH13Q8NBN7 331 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 SMC1BQ8NDV3 1235 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 RRP36Q96EU6 259 aaKnown RBP5.53□□□□□ -1.52
SCAF11-212ENST00000549162 DHTKD1Q96HY7 919 aaPredicted RBP5.53□□□□□ -1.52
SCAF11-212ENST00000549162 PRIMPOLQ96LW4 560 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 MXRA8Q9BRK3 442 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 METTL14Q9HCE5 456 aaKnown RBP5.53□□□□□ -1.52
SCAF11-212ENST00000549162 AGO4Q9HCK5 861 aaKnown RBP5.53□□□□□ -1.52
SCAF11-212ENST00000549162 C6orf50Q9HD87 102 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 LRP2BPQ9P2M1 347 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 GJB2P29033 226 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 SLFNL1Q499Z3 407 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 GORABQ5T7V8 394 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 KRT40Q6A162 431 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 LRSAM1Q6UWE0 723 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 RASGRP2Q7LDG7 609 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 DEFB132Q7Z7B7 95 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 NME8Q8N427 588 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 INCENPQ9NQS7 918 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 ANKIB1Q9P2G1 1089 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 SEPT3Q9UH03 358 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 SLC12A7Q9Y666 1083 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 ASTN1O14525 1302 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 UMODL1Q5DID0 1318 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 TNRC6BQ9UPQ9 1833 aaKnown RBP5.53□□□□□ -1.52
SCAF11-212ENST00000549162 H7C1D1 291 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 PFKLP17858 780 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 AXLP30530 894 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 GJA9P57773 515 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 GTF2IP78347 998 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 SYCP1Q15431 976 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 ABHD15Q6UXT9 468 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 CAPN12Q6ZSI9 719 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 USP48Q86UV5 1035 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 OGFOD1Q8N543 542 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 EIF1ADQ8N9N8 165 aaKnown RBP5.53□□□□□ -1.52
SCAF11-212ENST00000549162 CUL5Q93034 780 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 DNAJC19Q96DA6 116 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 PGBD1Q96JS3 809 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 CCSER2Q9H7U1 834 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 PLCB1Q9NQ66 1216 aa5.53□□□□□ -1.52
SCAF11-212ENST00000549162 DDX25Q9UHL0 483 aaKnown RBP5.53□□□□□ -1.52
SCAF11-212ENST00000549162 DNMT3AQ9Y6K1 912 aaPredicted RBP5.53□□□□□ -1.52
SCAF11-212ENST00000549162 KIF28PB7ZC32 967 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 PRKAB2O43741 272 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 AP3M2P53677 418 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 GTF2BQ00403 316 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 ITIH3Q06033 890 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 TMEM67Q5HYA8 995 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 RNF168Q8IYW5 571 aaPredicted RBP5.52□□□□□ -1.53
SCAF11-212ENST00000549162 TGIF2Q9GZN2 237 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 PTPRHQ9HD43 1115 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 CABYRO75952 493 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 ARL2P36404 184 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 STAT2P52630 851 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 KRT76Q01546 638 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 SREBF2Q12772 1141 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 NCAPHQ15003 741 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 PI16Q6UXB8 463 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 OTOP1Q7RTM1 612 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 MLKLQ8NB16 471 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 PPTC7Q8NI37 304 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 FAM71BQ8TC56 605 aa5.52□□□□□ -1.53
SCAF11-212ENST00000549162 PURBQ96QR8 312 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms