RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 ZMYND8Q9ULU4 1186 aaPredicted RBP11.98□□□□□ -0.49
ATL3-204ENST00000540699 CEP131Q9UPN4 1083 aa11.98□□□□□ -0.49
ATL3-204ENST00000540699 PHF24Q9UPV7 400 aa11.98□□□□□ -0.49
ATL3-204ENST00000540699 FAM237AA0A1B0GTK4 181 aa11.97□□□□□ -0.49
ATL3-204ENST00000540699 CCDC194A0A1B0GVG4 234 aa11.97□□□□□ -0.49
ATL3-204ENST00000540699 MYADML2A6NDP7 307 aa11.97□□□□□ -0.49
ATL3-204ENST00000540699 GOLGA6L4A6NEF3 574 aa11.97□□□□□ -0.49
ATL3-204ENST00000540699 DYNC1LI2O43237 492 aaPredicted RBP11.97□□□□□ -0.49
ATL3-204ENST00000540699 CUTAO60888 179 aa11.97□□□□□ -0.49
ATL3-204ENST00000540699 C6orf222P0C671 652 aaPredicted RBP11.97□□□□□ -0.49
ATL3-204ENST00000540699 HOXD8P13378 290 aaPredicted RBP11.97□□□□□ -0.49
ATL3-204ENST00000540699 MARCKSP29966 332 aaPredicted RBP11.97□□□□□ -0.49
ATL3-204ENST00000540699 IRX5P78411 483 aaPredicted RBP11.97□□□□□ -0.49
ATL3-204ENST00000540699 FSCN1Q16658 493 aaKnown RBP11.97□□□□□ -0.49
ATL3-204ENST00000540699 LY6KQ17RY6 165 aa11.97□□□□□ -0.49
ATL3-204ENST00000540699 CELF3Q5SZQ8 465 aaKnown RBP11.97□□□□□ -0.49
ATL3-204ENST00000540699 GIMAP8Q8ND71 665 aaPredicted RBP11.97□□□□□ -0.49
ATL3-204ENST00000540699 ENGASEQ8NFI3 743 aa11.97□□□□□ -0.49
ATL3-204ENST00000540699 OR6J1Q8NGC5 347 aa11.97□□□□□ -0.49
ATL3-204ENST00000540699 LRCH3Q96II8 777 aa11.97□□□□□ -0.49
ATL3-204ENST00000540699 AP5M1Q9H0R1 490 aa11.97□□□□□ -0.49
ATL3-204ENST00000540699 GZF1Q9H116 711 aaPredicted RBP11.97□□□□□ -0.49
ATL3-204ENST00000540699 KCNH7Q9NS40 1196 aa11.97□□□□□ -0.49
ATL3-204ENST00000540699 MYH9P35579 1960 aaKnown RBP11.97□□□□□ -0.49
ATL3-204ENST00000540699 NFASCO94856 1347 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 MOXD2PA6NHM9 499 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 ATP9AO75110 1047 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 GGPS1O95749 300 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 ARP10275 920 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 SYN1P17600 705 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 ATP2B1P20020 1258 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 CMA1P23946 247 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 CPT1AP50416 773 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 ACLYP53396 1101 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 ZNF445P59923 1031 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 ATP2C1P98194 919 aaPredicted RBP11.96□□□□□ -0.49
ATL3-204ENST00000540699 SETQ01105 290 aaPredicted RBP11.96□□□□□ -0.49
ATL3-204ENST00000540699 LAMC2Q13753 1193 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 NEDD9Q14511 834 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 ZNF174Q15697 407 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 INF2Q27J81 1249 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 ZSCAN23Q3MJ62 389 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 Q4G0T1 1027 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 CCDC183Q5T5S1 534 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 PPP4R3AQ6IN85 833 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 METTL7BQ6UX53 244 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 NEK8Q86SG6 692 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 C4orf32Q8N8J7 132 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 KRI1Q8N9T8 703 aaKnown RBP11.96□□□□□ -0.49
ATL3-204ENST00000540699 PCSK9Q8NBP7 692 aaKnown RBP11.96□□□□□ -0.49
ATL3-204ENST00000540699 PPTC7Q8NI37 304 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 MRPS27Q92552 414 aaKnown RBP11.96□□□□□ -0.49
ATL3-204ENST00000540699 SYAP1Q96A49 352 aaPredicted RBP11.96□□□□□ -0.49
ATL3-204ENST00000540699 BCAS3Q9H6U6 928 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 AGO4Q9HCK5 861 aaKnown RBP11.96□□□□□ -0.49
ATL3-204ENST00000540699 HPSEQ9Y251 543 aa11.96□□□□□ -0.49
ATL3-204ENST00000540699 SRPRBQ9Y5M8 271 aaKnown RBP11.96□□□□□ -0.49
ATL3-204ENST00000540699 UNC80Q8N2C7 3258 aa11.96□□□□□ -0.5
ATL3-204ENST00000540699 KBTBD13C9JR72 458 aa11.95□□□□□ -0.5
ATL3-204ENST00000540699 KPNA6O60684 536 aa11.95□□□□□ -0.5
ATL3-204ENST00000540699 NR1I2O75469 434 aa11.95□□□□□ -0.5
ATL3-204ENST00000540699 TDP2O95551 362 aa11.95□□□□□ -0.5
ATL3-204ENST00000540699 GCFC2P16383 781 aaKnown RBP11.95□□□□□ -0.5
ATL3-204ENST00000540699 ZNF76P36508 570 aa11.95□□□□□ -0.5
ATL3-204ENST00000540699 MAGEA10P43363 369 aaPredicted RBP11.95□□□□□ -0.5
ATL3-204ENST00000540699 BEX3Q00994 111 aa11.95□□□□□ -0.5
ATL3-204ENST00000540699 GRIN1Q05586 938 aa11.95□□□□□ -0.5
ATL3-204ENST00000540699 ORC2Q13416 577 aaPredicted RBP11.95□□□□□ -0.5
ATL3-204ENST00000540699 SNW1Q13573 536 aaKnown RBP11.95□□□□□ -0.5
ATL3-204ENST00000540699 KCNA10Q16322 511 aa11.95□□□□□ -0.5
ATL3-204ENST00000540699 GNASQ5JWF2 1037 aa11.95□□□□□ -0.5
ATL3-204ENST00000540699 RESP18Q5W5W9 173 aa11.95□□□□□ -0.5
ATL3-204ENST00000540699 SHC4Q6S5L8 630 aa11.95□□□□□ -0.5
ATL3-204ENST00000540699 PLA2G4DQ86XP0 818 aa11.95□□□□□ -0.5
ATL3-204ENST00000540699 DHX37Q8IY37 1157 aaKnown RBP11.95□□□□□ -0.5
ATL3-204ENST00000540699 FMR1NBQ8N0W7 255 aaPredicted RBP11.95□□□□□ -0.5
ATL3-204ENST00000540699 FSIP1Q8NA03 581 aa11.95□□□□□ -0.5
ATL3-204ENST00000540699 ZNF579Q8NAF0 562 aaKnown RBP11.95□□□□□ -0.5
ATL3-204ENST00000540699 AFG1LQ8WV93 481 aa11.95□□□□□ -0.5
ATL3-204ENST00000540699 CLIC6Q96NY7 704 aa11.95□□□□□ -0.5
ATL3-204ENST00000540699 NAP1L4Q99733 375 aaKnown RBP11.95□□□□□ -0.5
ATL3-204ENST00000540699 DDX19AQ9NUU7 478 aaKnown RBP11.95□□□□□ -0.5
ATL3-204ENST00000540699 DACT1Q9NYF0 836 aa11.95□□□□□ -0.5
ATL3-204ENST00000540699 LTBP2Q14767 1821 aa11.95□□□□□ -0.5
ATL3-204ENST00000540699 KAT6AQ92794 2004 aa11.94□□□□□ -0.5
ATL3-204ENST00000540699 A0A1W2PQ45 241 aaPredicted RBP11.94□□□□□ -0.5
ATL3-204ENST00000540699 A0A1W2PQY0 241 aa11.94□□□□□ -0.5
ATL3-204ENST00000540699 DHX15O43143 795 aaKnown RBP11.94□□□□□ -0.5
ATL3-204ENST00000540699 ZEB2O60315 1214 aa11.94□□□□□ -0.5
ATL3-204ENST00000540699 PPFIA4O75335 1185 aa11.94□□□□□ -0.5
ATL3-204ENST00000540699 CABYRO75952 493 aa11.94□□□□□ -0.5
ATL3-204ENST00000540699 ASGR1P07306 291 aa11.94□□□□□ -0.5
ATL3-204ENST00000540699 MMP3P08254 477 aa11.94□□□□□ -0.5
ATL3-204ENST00000540699 FAM160A1Q05DH4 1040 aa11.94□□□□□ -0.5
ATL3-204ENST00000540699 PTGDRQ13258 359 aa11.94□□□□□ -0.5
ATL3-204ENST00000540699 ITGB3BPQ13352 177 aaPredicted RBP11.94□□□□□ -0.5
ATL3-204ENST00000540699 GSE1Q14687 1217 aa11.94□□□□□ -0.5
ATL3-204ENST00000540699 SNX17Q15036 470 aa11.94□□□□□ -0.5
ATL3-204ENST00000540699 LRRC26Q2I0M4 334 aa11.94□□□□□ -0.5
ATL3-204ENST00000540699 HSDL1Q3SXM5 330 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms