RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 SP2Q02086 613 aa19.5■□□□□ 0.71
CTSB-229ENST00000533572 PPIGQ13427 754 aaKnown RBP eCLIP19.5■□□□□ 0.712e-12■□□□□ 8.5
CTSB-229ENST00000533572 MTMR1Q13613 665 aa19.5■□□□□ 0.71
CTSB-229ENST00000533572 HSDL1Q3SXM5 330 aa19.5■□□□□ 0.71
CTSB-229ENST00000533572 MFSD5Q6N075 450 aa19.5■□□□□ 0.71
CTSB-229ENST00000533572 CYFIP1Q7L576 1253 aa19.5■□□□□ 0.71
CTSB-229ENST00000533572 NIPA1Q7RTP0 329 aa19.5■□□□□ 0.71
CTSB-229ENST00000533572 PGBD1Q96JS3 809 aa19.5■□□□□ 0.71
CTSB-229ENST00000533572 SENP7Q9BQF6 1050 aa19.5■□□□□ 0.71
CTSB-229ENST00000533572 TRMT13Q9NUP7 481 aaKnown RBP19.5■□□□□ 0.71
CTSB-229ENST00000533572 ADAMTS3O15072 1205 aa19.49■□□□□ 0.71
CTSB-229ENST00000533572 BRD1O95696 1058 aa19.49■□□□□ 0.71
CTSB-229ENST00000533572 DDIT3P35638 169 aa19.49■□□□□ 0.71
CTSB-229ENST00000533572 PSEN2P49810 448 aa19.49■□□□□ 0.71
CTSB-229ENST00000533572 SETQ01105 290 aaPredicted RBP19.49■□□□□ 0.71
CTSB-229ENST00000533572 SEMA3FQ13275 785 aa19.49■□□□□ 0.71
CTSB-229ENST00000533572 MFSD10Q14728 455 aa19.49■□□□□ 0.71
CTSB-229ENST00000533572 INF2Q27J81 1249 aa19.49■□□□□ 0.71
CTSB-229ENST00000533572 LRIT3Q3SXY7 679 aa19.49■□□□□ 0.71
CTSB-229ENST00000533572 PPP4R3AQ6IN85 833 aa19.49■□□□□ 0.71
CTSB-229ENST00000533572 C7orf31Q8N865 590 aa19.49■□□□□ 0.71
CTSB-229ENST00000533572 CYP3A7-CYP3A51PA0A087WV96 503 aa19.48■□□□□ 0.71
CTSB-229ENST00000533572 KIF28PB7ZC32 967 aa19.48■□□□□ 0.71
CTSB-229ENST00000533572 F13A1P00488 732 aa19.48■□□□□ 0.71
CTSB-229ENST00000533572 F2P00734 622 aa19.48■□□□□ 0.71
CTSB-229ENST00000533572 CYP3A7P24462 503 aa19.48■□□□□ 0.71
CTSB-229ENST00000533572 CYP2C18P33260 490 aa19.48■□□□□ 0.71
CTSB-229ENST00000533572 SP4Q02446 784 aa19.48■□□□□ 0.71
CTSB-229ENST00000533572 RESTQ13127 1097 aa19.48■□□□□ 0.71
CTSB-229ENST00000533572 CEP55Q53EZ4 464 aa19.48■□□□□ 0.71
CTSB-229ENST00000533572 PPP1R13LQ8WUF5 828 aa19.48■□□□□ 0.71
CTSB-229ENST00000533572 KAT2BQ92831 832 aa19.48■□□□□ 0.71
CTSB-229ENST00000533572 MXRA8Q9BRK3 442 aa19.48■□□□□ 0.71
CTSB-229ENST00000533572 JADE2Q9NQC1 790 aa19.48■□□□□ 0.71
CTSB-229ENST00000533572 UBIAD1Q9Y5Z9 338 aa19.48■□□□□ 0.71
CTSB-229ENST00000533572 CYP2C9P11712 490 aa19.47■□□□□ 0.71
CTSB-229ENST00000533572 HOXD8P13378 290 aaPredicted RBP19.47■□□□□ 0.71
CTSB-229ENST00000533572 ITGB5P18084 799 aa19.47■□□□□ 0.71
CTSB-229ENST00000533572 KIAA0753Q2KHM9 967 aa19.47■□□□□ 0.71
CTSB-229ENST00000533572 LETM2Q2VYF4 491 aa19.47■□□□□ 0.71
CTSB-229ENST00000533572 ATL3Q6DD88 541 aa19.47■□□□□ 0.71
CTSB-229ENST00000533572 CCDC155Q8N6L0 562 aa19.47■□□□□ 0.71
CTSB-229ENST00000533572 NOC4LQ9BVI4 516 aaKnown RBP19.47■□□□□ 0.71
CTSB-229ENST00000533572 CHMP5Q9NZZ3 219 aa19.47■□□□□ 0.71
CTSB-229ENST00000533572 PKD2L1Q9P0L9 805 aa19.47■□□□□ 0.71
CTSB-229ENST00000533572 BMP15O95972 392 aa19.46■□□□□ 0.71
CTSB-229ENST00000533572 CCL23P55773 120 aa19.46■□□□□ 0.71
CTSB-229ENST00000533572 SHHQ15465 462 aa19.46■□□□□ 0.71
CTSB-229ENST00000533572 PTGISQ16647 500 aa19.46■□□□□ 0.71
CTSB-229ENST00000533572 EARS2Q5JPH6 523 aaKnown RBP19.46■□□□□ 0.71
CTSB-229ENST00000533572 C9orf50Q5SZB4 431 aa19.46■□□□□ 0.71
CTSB-229ENST00000533572 FERMT3Q86UX7 667 aa19.46■□□□□ 0.71
CTSB-229ENST00000533572 SESTD1Q86VW0 696 aa19.46■□□□□ 0.71
CTSB-229ENST00000533572 RETREG2Q8NC44 543 aa19.46■□□□□ 0.71
CTSB-229ENST00000533572 RNPC3Q96LT9 517 aaKnown RBP19.46■□□□□ 0.71
CTSB-229ENST00000533572 ZNF215Q9UL58 517 aaPredicted RBP19.46■□□□□ 0.71
CTSB-229ENST00000533572 MEIS1O00470 390 aa19.45■□□□□ 0.7
CTSB-229ENST00000533572 CCNT1O60563 726 aaKnown RBP19.45■□□□□ 0.7
CTSB-229ENST00000533572 LGALS2P05162 132 aa19.45■□□□□ 0.7
CTSB-229ENST00000533572 CSF2RAP15509 400 aa19.45■□□□□ 0.7
CTSB-229ENST00000533572 BFSP2Q13515 415 aa19.45■□□□□ 0.7
CTSB-229ENST00000533572 Q4G0T1 1027 aa19.45■□□□□ 0.7
CTSB-229ENST00000533572 TTC38Q5R3I4 469 aa19.45■□□□□ 0.7
CTSB-229ENST00000533572 PSRC1Q6PGN9 363 aaPredicted RBP19.45■□□□□ 0.7
CTSB-229ENST00000533572 MBOAT7Q96N66 472 aa19.45■□□□□ 0.7
CTSB-229ENST00000533572 ZNF396Q96N95 335 aaPredicted RBP19.45■□□□□ 0.7
CTSB-229ENST00000533572 GPR20Q99678 358 aa19.45■□□□□ 0.7
CTSB-229ENST00000533572 SDF4Q9BRK5 362 aa19.45■□□□□ 0.7
CTSB-229ENST00000533572 HDAC6Q9UBN7 1215 aa19.45■□□□□ 0.7
CTSB-229ENST00000533572 CEP131Q9UPN4 1083 aa19.45■□□□□ 0.7
CTSB-229ENST00000533572 SOX1O00570 391 aaPredicted RBP19.44■□□□□ 0.7
CTSB-229ENST00000533572 TBX3O15119 743 aa19.44■□□□□ 0.7
CTSB-229ENST00000533572 KCNA2P16389 499 aa19.44■□□□□ 0.7
CTSB-229ENST00000533572 UTP14CQ5TAP6 766 aaKnown RBP19.44■□□□□ 0.7
CTSB-229ENST00000533572 GDF6Q6KF10 455 aaPredicted RBP19.44■□□□□ 0.7
CTSB-229ENST00000533572 LRCH3Q96II8 777 aa19.44■□□□□ 0.7
CTSB-229ENST00000533572 MTIF3Q9H2K0 278 aaKnown RBP19.44■□□□□ 0.7
CTSB-229ENST00000533572 BCAS3Q9H6U6 928 aa19.44■□□□□ 0.7
CTSB-229ENST00000533572 DDX25Q9UHL0 483 aaKnown RBP19.44■□□□□ 0.7
CTSB-229ENST00000533572 GTF2IRD1Q9UHL9 959 aa19.44■□□□□ 0.7
CTSB-229ENST00000533572 UMODL1Q5DID0 1318 aa19.44■□□□□ 0.7
CTSB-229ENST00000533572 H3BRB1 525 aa19.43■□□□□ 0.7
CTSB-229ENST00000533572 HAS3O00219 553 aa19.43■□□□□ 0.7
CTSB-229ENST00000533572 LAD1O00515 517 aa19.43■□□□□ 0.7
CTSB-229ENST00000533572 ATP9AO75110 1047 aa19.43■□□□□ 0.7
CTSB-229ENST00000533572 BAG4O95429 457 aaKnown RBP19.43■□□□□ 0.7
CTSB-229ENST00000533572 EPHB4P54760 987 aa19.43■□□□□ 0.7
CTSB-229ENST00000533572 PKP1Q13835 747 aa19.43■□□□□ 0.7
CTSB-229ENST00000533572 PLA2G4DQ86XP0 818 aa19.43■□□□□ 0.7
CTSB-229ENST00000533572 RPUSD2Q8IZ73 545 aaKnown RBP19.43■□□□□ 0.7
CTSB-229ENST00000533572 C16orf70Q9BSU1 422 aa19.43■□□□□ 0.7
CTSB-229ENST00000533572 TUT1Q9H6E5 874 aaKnown RBP19.43■□□□□ 0.7
CTSB-229ENST00000533572 JPH1Q9HDC5 661 aaPredicted RBP19.43■□□□□ 0.7
CTSB-229ENST00000533572 IL23AQ9NPF7 189 aa19.43■□□□□ 0.7
CTSB-229ENST00000533572 KCNH7Q9NS40 1196 aa19.43■□□□□ 0.7
CTSB-229ENST00000533572 DOCK5Q9H7D0 1870 aa19.42■□□□□ 0.7
CTSB-229ENST00000533572 IGLV3-22A0A075B6J6 115 aa19.42■□□□□ 0.7
CTSB-229ENST00000533572 FAM205CA6NFA0 338 aa19.42■□□□□ 0.7
CTSB-229ENST00000533572 FAM86B1E9PN63 330 aa19.42■□□□□ 0.7
CTSB-229ENST00000533572 PITPNM1O00562 1244 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms