RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 ZBTB33Q86T24 672 aa13.52□□□□□ -0.25
SDCBP-211ENST00000523441 APBB2Q92870 758 aa13.52□□□□□ -0.25
SDCBP-211ENST00000523441 COL4A6Q14031 1691 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 B4E1Z4 1266 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 C5orf67F2Z3F1 127 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 OPLAHO14841 1288 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 PER2O15055 1255 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 MMP1P03956 469 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 GNAT1P11488 350 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 HOXD8P13378 290 aaPredicted RBP13.51□□□□□ -0.25
SDCBP-211ENST00000523441 ASPRV1Q53RT3 343 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 KCNV1Q6PIU1 500 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 STAG2Q8N3U4 1231 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 MICAL1Q8TDZ2 1067 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 PIBF1Q8WXW3 757 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 RILPL2Q969X0 211 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 EVI5LQ96CN4 794 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 AMNQ9BXJ7 453 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 CLEC1BQ9P126 229 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 PLAGL2Q9UPG8 496 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 RWDD3Q9Y3V2 267 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 USP15Q9Y4E8 981 aaPredicted RBP13.51□□□□□ -0.25
SDCBP-211ENST00000523441 PCDHA1Q9Y5I3 950 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 MRPL42Q9Y6G3 142 aaKnown RBP13.51□□□□□ -0.25
SDCBP-211ENST00000523441 SPTBN4Q9H254 2564 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 ZDBF2Q9HCK1 2354 aa13.51□□□□□ -0.25
SDCBP-211ENST00000523441 BAZ2BQ9UIF8 2168 aaKnown RBP13.51□□□□□ -0.25
SDCBP-211ENST00000523441 PLXNA3P51805 1871 aa13.5□□□□□ -0.25
SDCBP-211ENST00000523441 LAMA4Q16363 1823 aa13.5□□□□□ -0.25
SDCBP-211ENST00000523441 ENPP3O14638 875 aa13.5□□□□□ -0.25
SDCBP-211ENST00000523441 PPP1R11O60927 126 aaPredicted RBP13.5□□□□□ -0.25
SDCBP-211ENST00000523441 PDGFBP01127 241 aaPredicted RBP13.5□□□□□ -0.25
SDCBP-211ENST00000523441 CHRNA1P02708 482 aa13.5□□□□□ -0.25
SDCBP-211ENST00000523441 ITGB1P05556 798 aa13.5□□□□□ -0.25
SDCBP-211ENST00000523441 LINC00271P0C7V0 271 aa13.5□□□□□ -0.25
SDCBP-211ENST00000523441 MARK3P27448 753 aa13.5□□□□□ -0.25
SDCBP-211ENST00000523441 GATMP50440 423 aa13.5□□□□□ -0.25
SDCBP-211ENST00000523441 HSD17B4P51659 736 aa13.5□□□□□ -0.25
SDCBP-211ENST00000523441 IGBP1P78318 339 aa13.5□□□□□ -0.25
SDCBP-211ENST00000523441 CAMK1Q14012 370 aa13.5□□□□□ -0.25
SDCBP-211ENST00000523441 SPOUT1Q5T280 376 aaKnown RBP13.5□□□□□ -0.25
SDCBP-211ENST00000523441 ANKRD45Q5TZF3 282 aa13.5□□□□□ -0.25
SDCBP-211ENST00000523441 BMP8AQ7Z5Y6 402 aa13.5□□□□□ -0.25
SDCBP-211ENST00000523441 VSIG10LQ86VR7 867 aa13.5□□□□□ -0.25
SDCBP-211ENST00000523441 IQCA1Q86XH1 822 aa13.5□□□□□ -0.25
SDCBP-211ENST00000523441 LMBR1Q8WVP7 490 aa13.5□□□□□ -0.25
SDCBP-211ENST00000523441 PPP2R3CQ969Q6 453 aa13.5□□□□□ -0.25
SDCBP-211ENST00000523441 ZBTB10Q96DT7 871 aa13.5□□□□□ -0.25
SDCBP-211ENST00000523441 MSLNLQ96KJ4 702 aa13.5□□□□□ -0.25
SDCBP-211ENST00000523441 ZSCAN10Q96SZ4 725 aaPredicted RBP13.5□□□□□ -0.25
SDCBP-211ENST00000523441 RNF41Q9H4P4 317 aaPredicted RBP13.5□□□□□ -0.25
SDCBP-211ENST00000523441 FOXD4L1Q9NU39 408 aa13.5□□□□□ -0.25
SDCBP-211ENST00000523441 ZNF213O14771 459 aa13.49□□□□□ -0.25
SDCBP-211ENST00000523441 AVPR2P30518 371 aa13.49□□□□□ -0.25
SDCBP-211ENST00000523441 TMEM62Q0P6H9 643 aa13.49□□□□□ -0.25
SDCBP-211ENST00000523441 LPIN1Q14693 890 aa13.49□□□□□ -0.25
SDCBP-211ENST00000523441 DGKHQ86XP1 1220 aa13.49□□□□□ -0.25
SDCBP-211ENST00000523441 KLHL23Q8NBE8 558 aa13.49□□□□□ -0.25
SDCBP-211ENST00000523441 POF1BQ8WVV4 589 aa13.49□□□□□ -0.25
SDCBP-211ENST00000523441 DNAJB3Q8WWF6 145 aa13.49□□□□□ -0.25
SDCBP-211ENST00000523441 PRRX2Q99811 253 aa13.49□□□□□ -0.25
SDCBP-211ENST00000523441 FAM49AQ9H0Q0 323 aaPredicted RBP13.49□□□□□ -0.25
SDCBP-211ENST00000523441 PKD2L1Q9P0L9 805 aa13.49□□□□□ -0.25
SDCBP-211ENST00000523441 ZNF215Q9UL58 517 aaPredicted RBP13.49□□□□□ -0.25
SDCBP-211ENST00000523441 LOC730098B7Z3J9 87 aa13.48□□□□□ -0.25
SDCBP-211ENST00000523441 GCOM1H8Y6P7 765 aaPredicted RBP13.48□□□□□ -0.25
SDCBP-211ENST00000523441 CAND2O75155 1236 aa13.48□□□□□ -0.25
SDCBP-211ENST00000523441 GLP2RO95838 553 aa13.48□□□□□ -0.25
SDCBP-211ENST00000523441 POLR2MP0CAP2 368 aa13.48□□□□□ -0.25
SDCBP-211ENST00000523441 CD52P31358 61 aa13.48□□□□□ -0.25
SDCBP-211ENST00000523441 SIGLEC14Q08ET2 396 aa13.48□□□□□ -0.25
SDCBP-211ENST00000523441 STOX1Q6ZVD7 989 aa13.48□□□□□ -0.25
SDCBP-211ENST00000523441 EFHBQ8N7U6 833 aa13.48□□□□□ -0.25
SDCBP-211ENST00000523441 ENAHQ8N8S7 591 aaPredicted RBP13.48□□□□□ -0.25
SDCBP-211ENST00000523441 SMRP1Q8NCR6 262 aa13.48□□□□□ -0.25
SDCBP-211ENST00000523441 SPPL3Q8TCT6 385 aa13.48□□□□□ -0.25
SDCBP-211ENST00000523441 CLP1Q92989 425 aaKnown RBP13.48□□□□□ -0.25
SDCBP-211ENST00000523441 GPR20Q99678 358 aa13.48□□□□□ -0.25
SDCBP-211ENST00000523441 USP26Q9BXU7 913 aa13.48□□□□□ -0.25
SDCBP-211ENST00000523441 TLE6Q9H808 572 aa13.48□□□□□ -0.25
SDCBP-211ENST00000523441 TSHZ2Q9NRE2 1034 aa13.48□□□□□ -0.25
SDCBP-211ENST00000523441 PCDHB15Q9Y5E8 787 aa13.48□□□□□ -0.25
SDCBP-211ENST00000523441 TTC3P53804 2025 aa13.47□□□□□ -0.25
SDCBP-211ENST00000523441 KLRF2D3W0D1 207 aa13.47□□□□□ -0.25
SDCBP-211ENST00000523441 DGKIO75912 1065 aa13.47□□□□□ -0.25
SDCBP-211ENST00000523441 EYA4O95677 639 aa13.47□□□□□ -0.25
SDCBP-211ENST00000523441 HOXC8P31273 242 aa13.47□□□□□ -0.25
SDCBP-211ENST00000523441 PKN1Q16512 942 aa13.47□□□□□ -0.25
SDCBP-211ENST00000523441 FAM26DQ5JW98 314 aa13.47□□□□□ -0.25
SDCBP-211ENST00000523441 LLGL2Q6P1M3 1020 aa13.47□□□□□ -0.25
SDCBP-211ENST00000523441 PIGSQ96S52 555 aa13.47□□□□□ -0.25
SDCBP-211ENST00000523441 PHF7Q9BWX1 381 aaPredicted RBP13.47□□□□□ -0.25
SDCBP-211ENST00000523441 RC3H2Q9HBD1 1191 aaKnown RBP13.47□□□□□ -0.25
SDCBP-211ENST00000523441 CDY2AQ9Y6F7 541 aa13.47□□□□□ -0.25
SDCBP-211ENST00000523441 ZBTB5O15062 677 aa13.46□□□□□ -0.25
SDCBP-211ENST00000523441 TGFB3P10600 412 aa13.46□□□□□ -0.25
SDCBP-211ENST00000523441 PPFIA1Q13136 1202 aa13.46□□□□□ -0.25
SDCBP-211ENST00000523441 NEDD9Q14511 834 aa13.46□□□□□ -0.25
SDCBP-211ENST00000523441 GNPTABQ3T906 1256 aa13.46□□□□□ -0.25
SDCBP-211ENST00000523441 IFIT1BQ5T764 474 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms