RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 SDSP20132 328 aa12.96□□□□□ -0.33
CSMD1-210ENST00000521646 RBL2Q08999 1139 aa12.96□□□□□ -0.33
CSMD1-210ENST00000521646 MFSD6Q6ZSS7 791 aa12.96□□□□□ -0.33
CSMD1-210ENST00000521646 SESTD1Q86VW0 696 aa12.96□□□□□ -0.33
CSMD1-210ENST00000521646 PLEKHM2Q8IWE5 1019 aa12.96□□□□□ -0.33
CSMD1-210ENST00000521646 PNMA1Q8ND90 353 aa12.96□□□□□ -0.33
CSMD1-210ENST00000521646 RGS22Q8NE09 1264 aa12.96□□□□□ -0.33
CSMD1-210ENST00000521646 ANKS1AQ92625 1134 aa12.96□□□□□ -0.33
CSMD1-210ENST00000521646 TTC14Q96N46 770 aa12.96□□□□□ -0.33
CSMD1-210ENST00000521646 FTOQ9C0B1 505 aaKnown RBP eCLIP12.96□□□□□ -0.33
CSMD1-210ENST00000521646 SIP14410 1827 aa12.96□□□□□ -0.33
CSMD1-210ENST00000521646 DOCK5Q9H7D0 1870 aa12.95□□□□□ -0.34
CSMD1-210ENST00000521646 RFC2P35250 354 aa12.95□□□□□ -0.34
CSMD1-210ENST00000521646 PTPN11Q06124 597 aaPredicted RBP12.95□□□□□ -0.34
CSMD1-210ENST00000521646 COL9A3Q14050 684 aaPredicted RBP12.95□□□□□ -0.34
CSMD1-210ENST00000521646 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.95□□□□□ -0.34
CSMD1-210ENST00000521646 LRRC8DQ7L1W4 858 aa12.95□□□□□ -0.34
CSMD1-210ENST00000521646 PHOSPHO2Q8TCD6 241 aa12.95□□□□□ -0.34
CSMD1-210ENST00000521646 SUGCTQ9HAC7 445 aa12.95□□□□□ -0.34
CSMD1-210ENST00000521646 ZSWIM5Q9P217 1185 aa12.95□□□□□ -0.34
CSMD1-210ENST00000521646 GTF2IRD1Q9UHL9 959 aa12.95□□□□□ -0.34
CSMD1-210ENST00000521646 MTUS1Q9ULD2 1270 aa12.95□□□□□ -0.34
CSMD1-210ENST00000521646 BAZ2BQ9UIF8 2168 aaKnown RBP12.95□□□□□ -0.34
CSMD1-210ENST00000521646 F2P00734 622 aa12.94□□□□□ -0.34
CSMD1-210ENST00000521646 HOXD8P13378 290 aaPredicted RBP12.94□□□□□ -0.34
CSMD1-210ENST00000521646 SKIV2LQ15477 1246 aaKnown RBP12.94□□□□□ -0.34
CSMD1-210ENST00000521646 HSDL1Q3SXM5 330 aa12.94□□□□□ -0.34
CSMD1-210ENST00000521646 PKDCCQ504Y2 493 aa12.94□□□□□ -0.34
CSMD1-210ENST00000521646 ZNF618Q5T7W0 954 aa12.94□□□□□ -0.34
CSMD1-210ENST00000521646 B4GALNT3Q6L9W6 998 aa12.94□□□□□ -0.34
CSMD1-210ENST00000521646 CYB5R4Q7L1T6 521 aa12.94□□□□□ -0.34
CSMD1-210ENST00000521646 DGKHQ86XP1 1220 aa12.94□□□□□ -0.34
CSMD1-210ENST00000521646 SMC5Q8IY18 1101 aa12.94□□□□□ -0.34
CSMD1-210ENST00000521646 RILPL2Q969X0 211 aa12.94□□□□□ -0.34
CSMD1-210ENST00000521646 MTMR8Q96EF0 704 aa12.94□□□□□ -0.34
CSMD1-210ENST00000521646 RMDN3Q96TC7 470 aa12.94□□□□□ -0.34
CSMD1-210ENST00000521646 ALG1Q9BT22 464 aa12.94□□□□□ -0.34
CSMD1-210ENST00000521646 VAT1LQ9HCJ6 419 aa12.94□□□□□ -0.34
CSMD1-210ENST00000521646 PXMP2Q9NR77 195 aa12.94□□□□□ -0.34
CSMD1-210ENST00000521646 MICAL3Q7RTP6 2002 aa12.94□□□□□ -0.34
CSMD1-210ENST00000521646 ABCB11O95342 1321 aa12.93□□□□□ -0.34
CSMD1-210ENST00000521646 LINC01553A4QN01 128 aa12.93□□□□□ -0.34
CSMD1-210ENST00000521646 FAM86C2PA6NEL3 165 aa12.93□□□□□ -0.34
CSMD1-210ENST00000521646 LGR5O75473 907 aa12.93□□□□□ -0.34
CSMD1-210ENST00000521646 GH1P01241 217 aa12.93□□□□□ -0.34
CSMD1-210ENST00000521646 SELPP16109 830 aa12.93□□□□□ -0.34
CSMD1-210ENST00000521646 HOXA13P31271 388 aaPredicted RBP12.93□□□□□ -0.34
CSMD1-210ENST00000521646 HSD17B4P51659 736 aa12.93□□□□□ -0.34
CSMD1-210ENST00000521646 GHRHRQ02643 423 aa12.93□□□□□ -0.34
CSMD1-210ENST00000521646 SEC23AQ15436 765 aa12.93□□□□□ -0.34
CSMD1-210ENST00000521646 GPATCH4Q5T3I0 446 aaKnown RBP12.93□□□□□ -0.34
CSMD1-210ENST00000521646 FAM117BQ6P1L5 589 aa12.93□□□□□ -0.34
CSMD1-210ENST00000521646 CWC27Q6UX04 472 aaKnown RBP12.93□□□□□ -0.34
CSMD1-210ENST00000521646 AFAP1L1Q8TED9 768 aa12.93□□□□□ -0.34
CSMD1-210ENST00000521646 ZSCAN10Q96SZ4 725 aaPredicted RBP12.93□□□□□ -0.34
CSMD1-210ENST00000521646 LRFN3Q9BTN0 628 aa12.93□□□□□ -0.34
CSMD1-210ENST00000521646 PKD2L1Q9P0L9 805 aa12.93□□□□□ -0.34
CSMD1-210ENST00000521646 COL4A6Q14031 1691 aa12.93□□□□□ -0.34
CSMD1-210ENST00000521646 MYO7AQ13402 2215 aa12.92□□□□□ -0.34
CSMD1-210ENST00000521646 CYTH3O43739 400 aa12.92□□□□□ -0.34
CSMD1-210ENST00000521646 KPNA6O60684 536 aa12.92□□□□□ -0.34
CSMD1-210ENST00000521646 BAIAP3O94812 1187 aa12.92□□□□□ -0.34
CSMD1-210ENST00000521646 GJB5O95377 273 aa12.92□□□□□ -0.34
CSMD1-210ENST00000521646 NR3C2P08235 984 aa12.92□□□□□ -0.34
CSMD1-210ENST00000521646 ACTN1P12814 892 aa12.92□□□□□ -0.34
CSMD1-210ENST00000521646 PLA2G5P39877 138 aa12.92□□□□□ -0.34
CSMD1-210ENST00000521646 SEMA3FQ13275 785 aa12.92□□□□□ -0.34
CSMD1-210ENST00000521646 BFSP2Q13515 415 aa12.92□□□□□ -0.34
CSMD1-210ENST00000521646 KIAA0753Q2KHM9 967 aa12.92□□□□□ -0.34
CSMD1-210ENST00000521646 RETREG2Q8NC44 543 aa12.92□□□□□ -0.34
CSMD1-210ENST00000521646 CAGE1Q8TC20 777 aa12.92□□□□□ -0.34
CSMD1-210ENST00000521646 NSUN6Q8TEA1 469 aaKnown RBP12.92□□□□□ -0.34
CSMD1-210ENST00000521646 ESR2Q92731 530 aa12.92□□□□□ -0.34
CSMD1-210ENST00000521646 PDCD2LQ9BRP1 358 aa12.92□□□□□ -0.34
CSMD1-210ENST00000521646 C17orf80Q9BSJ5 609 aa12.92□□□□□ -0.34
CSMD1-210ENST00000521646 C16orf70Q9BSU1 422 aa12.92□□□□□ -0.34
CSMD1-210ENST00000521646 MAD2L2Q9UI95 211 aa12.92□□□□□ -0.34
CSMD1-210ENST00000521646 SUPT16HQ9Y5B9 1047 aaKnown RBP12.92□□□□□ -0.34
CSMD1-210ENST00000521646 RAD50Q92878 1312 aa12.91□□□□□ -0.34
CSMD1-210ENST00000521646 FAM187AA6NFU0 413 aa12.91□□□□□ -0.34
CSMD1-210ENST00000521646 CFBP00751 764 aa12.91□□□□□ -0.34
CSMD1-210ENST00000521646 UBA1P22314 1058 aaKnown RBP12.91□□□□□ -0.34
CSMD1-210ENST00000521646 HOXC8P31273 242 aa12.91□□□□□ -0.34
CSMD1-210ENST00000521646 ERVK-21P61565 698 aa12.91□□□□□ -0.34
CSMD1-210ENST00000521646 STXBP2Q15833 593 aa12.91□□□□□ -0.34
CSMD1-210ENST00000521646 MYSM1Q5VVJ2 828 aa12.91□□□□□ -0.34
CSMD1-210ENST00000521646 CNKSR3Q6P9H4 555 aa12.91□□□□□ -0.34
CSMD1-210ENST00000521646 PPTC7Q8NI37 304 aa12.91□□□□□ -0.34
CSMD1-210ENST00000521646 PRR7Q8TB68 274 aa12.91□□□□□ -0.34
CSMD1-210ENST00000521646 OSBPL3Q9H4L5 887 aa12.91□□□□□ -0.34
CSMD1-210ENST00000521646 NOD1Q9Y239 953 aa12.91□□□□□ -0.34
CSMD1-210ENST00000521646 ZNF213O14771 459 aa12.9□□□□□ -0.34
CSMD1-210ENST00000521646 DGAT1O75907 488 aa12.9□□□□□ -0.34
CSMD1-210ENST00000521646 LINC00271P0C7V0 271 aa12.9□□□□□ -0.34
CSMD1-210ENST00000521646 PCP11498 1178 aaKnown RBP12.9□□□□□ -0.34
CSMD1-210ENST00000521646 NUCB1Q02818 461 aa12.9□□□□□ -0.34
CSMD1-210ENST00000521646 PGM5Q15124 567 aa12.9□□□□□ -0.34
CSMD1-210ENST00000521646 DGKDQ16760 1214 aa12.9□□□□□ -0.34
CSMD1-210ENST00000521646 ARHGEF16Q5VV41 709 aa12.9□□□□□ -0.34
CSMD1-210ENST00000521646 STOX1Q6ZVD7 989 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms