RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 COPRSQ9NQ92 184 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 ZDHHC3Q9NYG2 299 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 GGT7Q9UJ14 662 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 PPP2R3BQ9Y5P8 575 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 PSME4Q14997 1843 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.36□□□□□ -1.71
CPNE3-204ENST00000517862 ANKRD62A6NC57 917 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 KBTBD13C9JR72 458 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 PQBP1O60828 265 aaKnown RBP4.36□□□□□ -1.71
CPNE3-204ENST00000517862 TNFRSF21O75509 655 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 TIMP1P01033 207 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 FGBP02675 491 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 USP17L7P0C7H9 530 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 CFPP27918 469 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 IL6STP40189 918 aaPredicted RBP4.36□□□□□ -1.71
CPNE3-204ENST00000517862 TAP1Q03518 808 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 ARID5AQ03989 594 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 HSP90AB2PQ58FF8 381 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 C1orf53Q5VUE5 145 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 HS2ST1Q7LGA3 356 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 OTOP2Q7RTS6 562 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 ZNF438Q7Z4V0 828 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 MCF2L2Q86YR7 1114 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 ZNF654Q8IZM8 581 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 CMTR1Q8N1G2 835 aaKnown RBP4.36□□□□□ -1.71
CPNE3-204ENST00000517862 ZNF843Q8N446 348 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.36□□□□□ -1.71
CPNE3-204ENST00000517862 SUMF1Q8NBK3 374 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 BHLHE22Q8NFJ8 381 aaPredicted RBP4.36□□□□□ -1.71
CPNE3-204ENST00000517862 LPAR1Q92633 364 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 GATA6Q92908 595 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 FERMT2Q96AC1 680 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 SUSD3Q96L08 255 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 DBNDD2Q9BQY9 259 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 SMOC2Q9H3U7 446 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 SRA1Q9HD15 236 aaKnown RBP4.36□□□□□ -1.71
CPNE3-204ENST00000517862 TMEM63CQ9P1W3 806 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 SLC4A7Q9Y6M7 1214 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 CEMIPQ8WUJ3 1361 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 NBEAL1Q6ZS30 2694 aa4.36□□□□□ -1.71
CPNE3-204ENST00000517862 FN1P02751 2386 aaKnown RBP4.35□□□□□ -1.71
CPNE3-204ENST00000517862 ST20-MTHFSA0A0A6YYL1 179 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 DCDC2CA8MYV0 355 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 TGFBR3LH3BV60 316 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 BIN1O00499 593 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 BBOX1O75936 387 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 PAPLNO95428 1278 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 C8BP07358 591 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 ZSCAN22P10073 491 aaPredicted RBP4.35□□□□□ -1.71
CPNE3-204ENST00000517862 GP1BBP13224 206 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 ATP2A2P16615 1042 aaKnown RBP4.35□□□□□ -1.71
CPNE3-204ENST00000517862 CYP2B6P20813 491 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 MTHFSP49914 203 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 CLCN5P51795 746 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 PAK2Q13177 524 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 BMS1Q14692 1282 aaKnown RBP4.35□□□□□ -1.71
CPNE3-204ENST00000517862 CLUL1Q15846 466 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 NXPE4Q6UWF7 544 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 LRRC69Q6ZNQ3 347 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 ERO1BQ86YB8 467 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 ZFPM1Q8IX07 1006 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 CCDC105Q8IYK2 499 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 TMEM199Q8N511 208 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 SNX29Q8TEQ0 813 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 DNAJC25Q9H1X3 360 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 MFSD1Q9H3U5 465 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 ZSWIM4Q9H7M6 989 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 ABCC4O15439 1325 aa4.35□□□□□ -1.71
CPNE3-204ENST00000517862 A0A1B0GUL7 405 aa4.34□□□□□ -1.71
CPNE3-204ENST00000517862 CLRN2A0PK11 232 aa4.34□□□□□ -1.71
CPNE3-204ENST00000517862 EREGO14944 169 aa4.34□□□□□ -1.71
CPNE3-204ENST00000517862 DHX15O43143 795 aaKnown RBP4.34□□□□□ -1.71
CPNE3-204ENST00000517862 MBTPS2O43462 519 aa4.34□□□□□ -1.71
CPNE3-204ENST00000517862 SUV39H1O43463 412 aa4.34□□□□□ -1.71
CPNE3-204ENST00000517862 PHACTR2O75167 634 aa4.34□□□□□ -1.71
CPNE3-204ENST00000517862 GADD45BO75293 160 aaPredicted RBP4.34□□□□□ -1.71
CPNE3-204ENST00000517862 LUC7L3O95232 432 aaKnown RBP4.34□□□□□ -1.71
CPNE3-204ENST00000517862 WISP1O95388 367 aa4.34□□□□□ -1.71
CPNE3-204ENST00000517862 FGRP09769 529 aa4.34□□□□□ -1.71
CPNE3-204ENST00000517862 ADCYAP1R1P41586 468 aa4.34□□□□□ -1.71
CPNE3-204ENST00000517862 TNNT2P45379 298 aaPredicted RBP4.34□□□□□ -1.71
CPNE3-204ENST00000517862 PPIL2Q13356 520 aa4.34□□□□□ -1.71
CPNE3-204ENST00000517862 PTPN21Q16825 1174 aa4.34□□□□□ -1.71
CPNE3-204ENST00000517862 LRRC56Q8IYG6 542 aaPredicted RBP4.34□□□□□ -1.71
CPNE3-204ENST00000517862 DTWD2Q8NBA8 298 aa4.34□□□□□ -1.71
CPNE3-204ENST00000517862 ARRDC4Q8NCT1 418 aa4.34□□□□□ -1.71
CPNE3-204ENST00000517862 PABPC5Q96DU9 382 aaKnown RBP4.34□□□□□ -1.71
CPNE3-204ENST00000517862 UBL7Q96S82 380 aaPredicted RBP4.34□□□□□ -1.71
CPNE3-204ENST00000517862 EYA3Q99504 573 aa4.34□□□□□ -1.71
CPNE3-204ENST00000517862 TRIM56Q9BRZ2 755 aaKnown RBP4.34□□□□□ -1.71
CPNE3-204ENST00000517862 NYXQ9GZU5 481 aa4.34□□□□□ -1.71
CPNE3-204ENST00000517862 VEZTQ9HBM0 779 aa4.34□□□□□ -1.71
CPNE3-204ENST00000517862 KBTBD4Q9NVX7 518 aa4.34□□□□□ -1.71
CPNE3-204ENST00000517862 DDX20Q9UHI6 824 aaKnown RBP4.34□□□□□ -1.71
CPNE3-204ENST00000517862 DMGDHQ9UI17 866 aaKnown RBP4.34□□□□□ -1.71
CPNE3-204ENST00000517862 GJD2Q9UKL4 321 aa4.34□□□□□ -1.71
CPNE3-204ENST00000517862 KCNMB2Q9Y691 235 aa4.34□□□□□ -1.71
CPNE3-204ENST00000517862 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.34□□□□□ -1.71
CPNE3-204ENST00000517862 XDHP47989 1333 aa4.34□□□□□ -1.71
CPNE3-204ENST00000517862 PLXNB2O15031 1838 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms