RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 KCNH6Q9H252 994 aa15.47■□□□□ 0.07
POLR2J3-212ENST00000507355 RNPEPQ9H4A4 650 aa15.47■□□□□ 0.07
POLR2J3-212ENST00000507355 TUT1Q9H6E5 874 aaKnown RBP15.47■□□□□ 0.07
POLR2J3-212ENST00000507355 PRKAG3Q9UGI9 489 aa15.47■□□□□ 0.07
POLR2J3-212ENST00000507355 C17orf102A2RUQ5 167 aa15.46■□□□□ 0.07
POLR2J3-212ENST00000507355 SPATA31C2B4DYI2 1134 aa15.46■□□□□ 0.07
POLR2J3-212ENST00000507355 LGALS2P05162 132 aa15.46■□□□□ 0.07
POLR2J3-212ENST00000507355 CTSHP09668 335 aa15.46■□□□□ 0.07
POLR2J3-212ENST00000507355 ICAM3P32942 547 aa15.46■□□□□ 0.07
POLR2J3-212ENST00000507355 IRS1P35568 1242 aa15.46■□□□□ 0.07
POLR2J3-212ENST00000507355 GNPTABQ3T906 1256 aa15.46■□□□□ 0.07
POLR2J3-212ENST00000507355 CYFIP1Q7L576 1253 aa15.46■□□□□ 0.07
POLR2J3-212ENST00000507355 RPAINQ86UA6 219 aa15.46■□□□□ 0.07
POLR2J3-212ENST00000507355 SERINC5Q86VE9 423 aa15.46■□□□□ 0.07
POLR2J3-212ENST00000507355 SEPT8Q92599 483 aa15.46■□□□□ 0.07
POLR2J3-212ENST00000507355 ATP6V0A1Q93050 837 aa15.46■□□□□ 0.07
POLR2J3-212ENST00000507355 SNX27Q96L92 541 aa15.46■□□□□ 0.07
POLR2J3-212ENST00000507355 INPP4AQ96PE3 977 aaPredicted RBP15.46■□□□□ 0.07
POLR2J3-212ENST00000507355 MYL10Q9BUA6 226 aa15.46■□□□□ 0.07
POLR2J3-212ENST00000507355 MUTYHQ9UIF7 546 aa15.46■□□□□ 0.07
POLR2J3-212ENST00000507355 RBM8AQ9Y5S9 174 aaKnown RBP15.46■□□□□ 0.07
POLR2J3-212ENST00000507355 RALGAPA2Q2PPJ7 1873 aa15.46■□□□□ 0.06
POLR2J3-212ENST00000507355 C19orf67A6NJJ6 358 aa15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 NOP56O00567 594 aaKnown RBP15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 TREHO43280 583 aa15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 STAM2O75886 525 aa15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 SMIM10L2AP0DMW4 78 aa15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 SMIM10L2BP0DMW5 78 aa15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 CTNNB1P35222 781 aa15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 SEMA3FQ13275 785 aa15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 NEDD9Q14511 834 aa15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 PLEKHG4Q58EX7 1191 aa15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 USP17L6PQ6QN14 398 aa15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 ZNF654Q8IZM8 581 aa15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 CTCFLQ8NI51 663 aaPredicted RBP15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 SMARCC2Q8TAQ2 1214 aa15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 RRP36Q96EU6 259 aaKnown RBP15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 MFSD14AQ96MC6 490 aa15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 PHOX2BQ99453 314 aa15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 MAP3K14Q99558 947 aa15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 USP26Q9BXU7 913 aa15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 IFIH1Q9BYX4 1025 aaKnown RBP15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 OSBPL7Q9BZF2 842 aa15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 UPF3BQ9BZI7 483 aaKnown RBP15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 LY9Q9HBG7 655 aa15.45■□□□□ 0.06
POLR2J3-212ENST00000507355 FRMPD4Q14CM0 1322 aa15.44■□□□□ 0.06
POLR2J3-212ENST00000507355 MEIS2O14770 477 aa15.44■□□□□ 0.06
POLR2J3-212ENST00000507355 FIBPO43427 364 aa15.44■□□□□ 0.06
POLR2J3-212ENST00000507355 SMARCA1P28370 1054 aa15.44■□□□□ 0.06
POLR2J3-212ENST00000507355 KIF5BP33176 963 aa15.44■□□□□ 0.06
POLR2J3-212ENST00000507355 COL19A1Q14993 1142 aa15.44■□□□□ 0.06
POLR2J3-212ENST00000507355 CASC1Q6TDU7 716 aa15.44■□□□□ 0.06
POLR2J3-212ENST00000507355 METTL7BQ6UX53 244 aa15.44■□□□□ 0.06
POLR2J3-212ENST00000507355 CUL5Q93034 780 aa15.44■□□□□ 0.06
POLR2J3-212ENST00000507355 TOP1MTQ969P6 601 aa15.44■□□□□ 0.06
POLR2J3-212ENST00000507355 GPR20Q99678 358 aa15.44■□□□□ 0.06
POLR2J3-212ENST00000507355 SPZ1Q9BXG8 430 aa15.44■□□□□ 0.06
POLR2J3-212ENST00000507355 SETD4Q9NVD3 440 aa15.44■□□□□ 0.06
POLR2J3-212ENST00000507355 TELO2Q9Y4R8 837 aa15.44■□□□□ 0.06
POLR2J3-212ENST00000507355 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.43■□□□□ 0.06
POLR2J3-212ENST00000507355 PRC1O43663 620 aa15.43■□□□□ 0.06
POLR2J3-212ENST00000507355 DDAH1O94760 285 aa15.43■□□□□ 0.06
POLR2J3-212ENST00000507355 HOXC8P31273 242 aa15.43■□□□□ 0.06
POLR2J3-212ENST00000507355 LTBRP36941 435 aa15.43■□□□□ 0.06
POLR2J3-212ENST00000507355 DLX2Q07687 328 aaPredicted RBP15.43■□□□□ 0.06
POLR2J3-212ENST00000507355 UTP14CQ5TAP6 766 aaKnown RBP15.43■□□□□ 0.06
POLR2J3-212ENST00000507355 PCNX4Q63HM2 1172 aa15.43■□□□□ 0.06
POLR2J3-212ENST00000507355 NFXL1Q6ZNB6 911 aa15.43■□□□□ 0.06
POLR2J3-212ENST00000507355 TMTC2Q8N394 836 aa15.43■□□□□ 0.06
POLR2J3-212ENST00000507355 LZTS2Q9BRK4 669 aa15.43■□□□□ 0.06
POLR2J3-212ENST00000507355 COL4A6Q14031 1691 aa15.43■□□□□ 0.06
POLR2J3-212ENST00000507355 TECTAO75443 2155 aa15.43■□□□□ 0.06
POLR2J3-212ENST00000507355 DOCK5Q9H7D0 1870 aa15.42■□□□□ 0.06
POLR2J3-212ENST00000507355 CCDC69A6NI79 296 aa15.42■□□□□ 0.06
POLR2J3-212ENST00000507355 PLEKHA8P1O95397 391 aa15.42■□□□□ 0.06
POLR2J3-212ENST00000507355 MCM5P33992 734 aa15.42■□□□□ 0.06
POLR2J3-212ENST00000507355 GNAQP50148 359 aa15.42■□□□□ 0.06
POLR2J3-212ENST00000507355 SP4Q02446 784 aa15.42■□□□□ 0.06
POLR2J3-212ENST00000507355 HYAL1Q12794 435 aa15.42■□□□□ 0.06
POLR2J3-212ENST00000507355 COL9A3Q14050 684 aaPredicted RBP15.42■□□□□ 0.06
POLR2J3-212ENST00000507355 SMAD2Q15796 467 aaKnown RBP15.42■□□□□ 0.06
POLR2J3-212ENST00000507355 RNF135Q8IUD6 432 aa15.42■□□□□ 0.06
POLR2J3-212ENST00000507355 CMTR1Q8N1G2 835 aaKnown RBP15.42■□□□□ 0.06
POLR2J3-212ENST00000507355 SRBD1Q8N5C6 995 aaKnown RBP15.42■□□□□ 0.06
POLR2J3-212ENST00000507355 POP1Q99575 1024 aaKnown RBP15.42■□□□□ 0.06
POLR2J3-212ENST00000507355 SENP7Q9BQF6 1050 aa15.42■□□□□ 0.06
POLR2J3-212ENST00000507355 MTA3Q9BTC8 594 aa15.42■□□□□ 0.06
POLR2J3-212ENST00000507355 IGFLR1Q9H665 355 aa15.42■□□□□ 0.06
POLR2J3-212ENST00000507355 SEC63Q9UGP8 760 aaKnown RBP15.42■□□□□ 0.06
POLR2J3-212ENST00000507355 USP34Q70CQ2 3546 aa15.41■□□□□ 0.06
POLR2J3-212ENST00000507355 PIK3CDO00329 1044 aa15.41■□□□□ 0.06
POLR2J3-212ENST00000507355 SH2B2O14492 632 aaPredicted RBP15.41■□□□□ 0.06
POLR2J3-212ENST00000507355 GRM6O15303 877 aa15.41■□□□□ 0.06
POLR2J3-212ENST00000507355 NCK2O43639 380 aa15.41■□□□□ 0.06
POLR2J3-212ENST00000507355 GNAT1P11488 350 aa15.41■□□□□ 0.06
POLR2J3-212ENST00000507355 RXRAP19793 462 aa15.41■□□□□ 0.06
POLR2J3-212ENST00000507355 GTF2F1P35269 517 aaKnown RBP eCLIP15.41■□□□□ 0.06
POLR2J3-212ENST00000507355 HERC4Q5GLZ8 1057 aaPredicted RBP15.41■□□□□ 0.06
POLR2J3-212ENST00000507355 XRRA1Q6P2D8 792 aa15.41■□□□□ 0.06
POLR2J3-212ENST00000507355 NLRX1Q86UT6 975 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms