RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 ADAM17P78536 824 aa13.44□□□□□ -0.26
CCHCR1-219ENST00000505392 ARHGAP4P98171 946 aa13.44□□□□□ -0.26
CCHCR1-219ENST00000505392 COASYQ13057 564 aa13.44□□□□□ -0.26
CCHCR1-219ENST00000505392 CCDC178Q5BJE1 867 aa13.44□□□□□ -0.26
CCHCR1-219ENST00000505392 IQCA1Q86XH1 822 aa13.44□□□□□ -0.26
CCHCR1-219ENST00000505392 EFHBQ8N7U6 833 aa13.44□□□□□ -0.26
CCHCR1-219ENST00000505392 IL31RAQ8NI17 732 aa13.44□□□□□ -0.26
CCHCR1-219ENST00000505392 P2RX5Q93086 422 aa13.44□□□□□ -0.26
CCHCR1-219ENST00000505392 PHF7Q9BWX1 381 aaPredicted RBP13.44□□□□□ -0.26
CCHCR1-219ENST00000505392 EHMT1Q9H9B1 1298 aa13.44□□□□□ -0.26
CCHCR1-219ENST00000505392 TLR9Q9NR96 1032 aa13.44□□□□□ -0.26
CCHCR1-219ENST00000505392 RCAN3Q9UKA8 241 aa13.44□□□□□ -0.26
CCHCR1-219ENST00000505392 NEDD4P46934 1319 aa13.43□□□□□ -0.26
CCHCR1-219ENST00000505392 TRIM6-TRIM34B2RNG4 842 aa13.43□□□□□ -0.26
CCHCR1-219ENST00000505392 ZNF213O14771 459 aa13.43□□□□□ -0.26
CCHCR1-219ENST00000505392 ITGB1P05556 798 aa13.43□□□□□ -0.26
CCHCR1-219ENST00000505392 CCND2P30279 289 aa13.43□□□□□ -0.26
CCHCR1-219ENST00000505392 NRIP1P48552 1158 aa13.43□□□□□ -0.26
CCHCR1-219ENST00000505392 GHRHRQ02643 423 aa13.43□□□□□ -0.26
CCHCR1-219ENST00000505392 UTP14CQ5TAP6 766 aaKnown RBP13.43□□□□□ -0.26
CCHCR1-219ENST00000505392 CYFIP1Q7L576 1253 aa13.43□□□□□ -0.26
CCHCR1-219ENST00000505392 ZNF589Q86UQ0 364 aaPredicted RBP13.43□□□□□ -0.26
CCHCR1-219ENST00000505392 FCHSD1Q86WN1 690 aa13.43□□□□□ -0.26
CCHCR1-219ENST00000505392 KLHL23Q8NBE8 558 aa13.43□□□□□ -0.26
CCHCR1-219ENST00000505392 POF1BQ8WVV4 589 aa13.43□□□□□ -0.26
CCHCR1-219ENST00000505392 ASIC4Q96FT7 647 aa13.43□□□□□ -0.26
CCHCR1-219ENST00000505392 BARX2Q9UMQ3 279 aaPredicted RBP13.43□□□□□ -0.26
CCHCR1-219ENST00000505392 USP15Q9Y4E8 981 aaPredicted RBP13.43□□□□□ -0.26
CCHCR1-219ENST00000505392 PCDHA1Q9Y5I3 950 aa13.43□□□□□ -0.26
CCHCR1-219ENST00000505392 COL4A6Q14031 1691 aa13.43□□□□□ -0.26
CCHCR1-219ENST00000505392 MYH7BA7E2Y1 1941 aa13.43□□□□□ -0.26
CCHCR1-219ENST00000505392 KIAA1217Q5T5P2 1943 aa13.43□□□□□ -0.26
CCHCR1-219ENST00000505392 CCDC171Q6TFL3 1326 aa13.42□□□□□ -0.26
CCHCR1-219ENST00000505392 PPFIA3O75145 1194 aa13.42□□□□□ -0.26
CCHCR1-219ENST00000505392 KDM4AO75164 1064 aa13.42□□□□□ -0.26
CCHCR1-219ENST00000505392 NEDD9Q14511 834 aa13.42□□□□□ -0.26
CCHCR1-219ENST00000505392 LPIN1Q14693 890 aa13.42□□□□□ -0.26
CCHCR1-219ENST00000505392 NAALADL2Q58DX5 795 aa13.42□□□□□ -0.26
CCHCR1-219ENST00000505392 METTL7BQ6UX53 244 aa13.42□□□□□ -0.26
CCHCR1-219ENST00000505392 TRIM50Q86XT4 487 aa13.42□□□□□ -0.26
CCHCR1-219ENST00000505392 STAG2Q8N3U4 1231 aa13.42□□□□□ -0.26
CCHCR1-219ENST00000505392 SAMD3Q8N6K7 520 aa13.42□□□□□ -0.26
CCHCR1-219ENST00000505392 MICAL1Q8TDZ2 1067 aa13.42□□□□□ -0.26
CCHCR1-219ENST00000505392 LMBR1Q8WVP7 490 aa13.42□□□□□ -0.26
CCHCR1-219ENST00000505392 ZSCAN10Q96SZ4 725 aaPredicted RBP13.42□□□□□ -0.26
CCHCR1-219ENST00000505392 GPR20Q99678 358 aa13.42□□□□□ -0.26
CCHCR1-219ENST00000505392 TLE6Q9H808 572 aa13.42□□□□□ -0.26
CCHCR1-219ENST00000505392 RTEL1Q9NZ71 1219 aa13.42□□□□□ -0.26
CCHCR1-219ENST00000505392 MRPL42Q9Y6G3 142 aaKnown RBP13.42□□□□□ -0.26
CCHCR1-219ENST00000505392 ZFHX2Q9C0A1 2572 aaPredicted RBP13.42□□□□□ -0.26
CCHCR1-219ENST00000505392 ZMYM6O95789 1325 aa13.41□□□□□ -0.26
CCHCR1-219ENST00000505392 NRCAMQ92823 1304 aa13.41□□□□□ -0.26
CCHCR1-219ENST00000505392 SPATA31C2B4DYI2 1134 aa13.41□□□□□ -0.26
CCHCR1-219ENST00000505392 GCOM1H8Y6P7 765 aaPredicted RBP13.41□□□□□ -0.26
CCHCR1-219ENST00000505392 PER2O15055 1255 aa13.41□□□□□ -0.26
CCHCR1-219ENST00000505392 ZBTB5O15062 677 aa13.41□□□□□ -0.26
CCHCR1-219ENST00000505392 PPP1R11O60927 126 aaPredicted RBP13.41□□□□□ -0.26
CCHCR1-219ENST00000505392 POLR2MP0CAP2 368 aa13.41□□□□□ -0.26
CCHCR1-219ENST00000505392 ICAM3P32942 547 aa13.41□□□□□ -0.26
CCHCR1-219ENST00000505392 NMIQ13287 307 aaPredicted RBP13.41□□□□□ -0.26
CCHCR1-219ENST00000505392 GNPTABQ3T906 1256 aa13.41□□□□□ -0.26
CCHCR1-219ENST00000505392 RUFY4Q6ZNE9 571 aa13.41□□□□□ -0.26
CCHCR1-219ENST00000505392 ZSWIM5Q9P217 1185 aa13.41□□□□□ -0.26
CCHCR1-219ENST00000505392 ZNF215Q9UL58 517 aaPredicted RBP13.41□□□□□ -0.26
CCHCR1-219ENST00000505392 TELO2Q9Y4R8 837 aa13.41□□□□□ -0.26
CCHCR1-219ENST00000505392 SALL3Q9BXA9 1300 aa13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 B4E1Z4 1266 aa13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 KLRF2D3W0D1 207 aa13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 GLP2RO95838 553 aa13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 MRPS9P82933 396 aaKnown RBP13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 SP4Q02446 784 aa13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 MGAT3Q09327 533 aa13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 PAN2Q504Q3 1202 aaKnown RBP13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 TAF2Q6P1X5 1199 aa13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 ASCL5Q7RTU5 278 aa13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 RSPH3Q86UC2 560 aa13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 RTN4RL1Q86UN2 441 aaPredicted RBP13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 CMTR2Q8IYT2 770 aaKnown RBP13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 ENAHQ8N8S7 591 aaPredicted RBP13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 DNAJB3Q8WWF6 145 aa13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 MTMR8Q96EF0 704 aa13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 RIPOR3Q96MK2 946 aa13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 ZBTB47Q9UFB7 747 aaPredicted RBP13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 PCDHB15Q9Y5E8 787 aa13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 PCDHGC5Q9Y5F6 944 aa13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 PTPRZ1P23471 2315 aaPredicted RBP13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 NLRC5Q86WI3 1866 aa13.4□□□□□ -0.26
CCHCR1-219ENST00000505392 PROB1E7EW31 1015 aa13.39□□□□□ -0.27
CCHCR1-219ENST00000505392 PDGFBP01127 241 aaPredicted RBP13.39□□□□□ -0.27
CCHCR1-219ENST00000505392 ATF7P17544 494 aaPredicted RBP13.39□□□□□ -0.27
CCHCR1-219ENST00000505392 RBM10P98175 930 aaKnown RBP13.39□□□□□ -0.27
CCHCR1-219ENST00000505392 SEMA3FQ13275 785 aa13.39□□□□□ -0.27
CCHCR1-219ENST00000505392 PTPN21Q16825 1174 aa13.39□□□□□ -0.27
CCHCR1-219ENST00000505392 FBXO47Q5MNV8 452 aa13.39□□□□□ -0.27
CCHCR1-219ENST00000505392 ANKRD45Q5TZF3 282 aa13.39□□□□□ -0.27
CCHCR1-219ENST00000505392 ZBTB33Q86T24 672 aa13.39□□□□□ -0.27
CCHCR1-219ENST00000505392 CRIPAKQ8N1N5 446 aa13.39□□□□□ -0.27
CCHCR1-219ENST00000505392 AGO3Q9H9G7 860 aaKnown RBP13.39□□□□□ -0.27
CCHCR1-219ENST00000505392 TRPC6Q9Y210 931 aa13.39□□□□□ -0.27
CCHCR1-219ENST00000505392 CDY2AQ9Y6F7 541 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms