RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 DEXIO95424 95 aa16.5■□□□□ 0.23
PDAP1-204ENST00000496335 CKBP12277 381 aa16.5■□□□□ 0.23
PDAP1-204ENST00000496335 TRIM71Q2Q1W2 868 aaKnown RBP16.5■□□□□ 0.23
PDAP1-204ENST00000496335 PLA2G4DQ86XP0 818 aa16.5■□□□□ 0.23
PDAP1-204ENST00000496335 BICD2Q8TD16 824 aa16.5■□□□□ 0.23
PDAP1-204ENST00000496335 AFAP1L1Q8TED9 768 aa16.5■□□□□ 0.23
PDAP1-204ENST00000496335 ATP6V0A1Q93050 837 aa16.5■□□□□ 0.23
PDAP1-204ENST00000496335 AGO4Q9HCK5 861 aaKnown RBP16.5■□□□□ 0.23
PDAP1-204ENST00000496335 JPH1Q9HDC5 661 aaPredicted RBP16.5■□□□□ 0.23
PDAP1-204ENST00000496335 SH3GLB2Q9NR46 395 aa16.5■□□□□ 0.23
PDAP1-204ENST00000496335 SETD4Q9NVD3 440 aa16.5■□□□□ 0.23
PDAP1-204ENST00000496335 SLC9A2Q9UBY0 812 aa16.5■□□□□ 0.23
PDAP1-204ENST00000496335 ZNF215Q9UL58 517 aaPredicted RBP16.5■□□□□ 0.23
PDAP1-204ENST00000496335 TREHO43280 583 aa16.49■□□□□ 0.23
PDAP1-204ENST00000496335 EIF5BO60841 1220 aaKnown RBP16.49■□□□□ 0.23
PDAP1-204ENST00000496335 CYP3A4P08684 503 aa16.49■□□□□ 0.23
PDAP1-204ENST00000496335 SELPP16109 830 aa16.49■□□□□ 0.23
PDAP1-204ENST00000496335 HOXC8P31273 242 aa16.49■□□□□ 0.23
PDAP1-204ENST00000496335 RFC2P35250 354 aa16.49■□□□□ 0.23
PDAP1-204ENST00000496335 NEK4P51957 841 aa16.49■□□□□ 0.23
PDAP1-204ENST00000496335 RBL2Q08999 1139 aa16.49■□□□□ 0.23
PDAP1-204ENST00000496335 GPNMBQ14956 572 aa16.49■□□□□ 0.23
PDAP1-204ENST00000496335 C8orf34Q49A92 452 aa16.49■□□□□ 0.23
PDAP1-204ENST00000496335 MCTP2Q6DN12 878 aa16.49■□□□□ 0.23
PDAP1-204ENST00000496335 LRRC8DQ7L1W4 858 aa16.49■□□□□ 0.23
PDAP1-204ENST00000496335 SERINC5Q86VE9 423 aa16.49■□□□□ 0.23
PDAP1-204ENST00000496335 GBF1Q92538 1859 aa16.49■□□□□ 0.23
PDAP1-204ENST00000496335 SDF4Q9BRK5 362 aa16.49■□□□□ 0.23
PDAP1-204ENST00000496335 FTOQ9C0B1 505 aaKnown RBP eCLIP16.49■□□□□ 0.23
PDAP1-204ENST00000496335 NFASCO94856 1347 aa16.48■□□□□ 0.23
PDAP1-204ENST00000496335 IGLV3-22A0A075B6J6 115 aa16.48■□□□□ 0.23
PDAP1-204ENST00000496335 ZBBXA8MT70 800 aa16.48■□□□□ 0.23
PDAP1-204ENST00000496335 DDX39AO00148 427 aaKnown RBP16.48■□□□□ 0.23
PDAP1-204ENST00000496335 EDIL3O43854 480 aa16.48■□□□□ 0.23
PDAP1-204ENST00000496335 LARGE1O95461 756 aa16.48■□□□□ 0.23
PDAP1-204ENST00000496335 PFKMP08237 780 aa16.48■□□□□ 0.23
PDAP1-204ENST00000496335 MARK3P27448 753 aa16.48■□□□□ 0.23
PDAP1-204ENST00000496335 PBX2P40425 430 aa16.48■□□□□ 0.23
PDAP1-204ENST00000496335 ANKRD1Q15327 319 aa16.48■□□□□ 0.23
PDAP1-204ENST00000496335 ZNF618Q5T7W0 954 aa16.48■□□□□ 0.23
PDAP1-204ENST00000496335 ZNF697Q5TEC3 545 aa16.48■□□□□ 0.23
PDAP1-204ENST00000496335 NIPA1Q7RTP0 329 aa16.48■□□□□ 0.23
PDAP1-204ENST00000496335 NECAB1Q8N987 351 aa16.48■□□□□ 0.23
PDAP1-204ENST00000496335 GLG1Q92896 1179 aa16.48■□□□□ 0.23
PDAP1-204ENST00000496335 PCYT2Q99447 389 aa16.48■□□□□ 0.23
PDAP1-204ENST00000496335 MTIF3Q9H2K0 278 aaKnown RBP16.48■□□□□ 0.23
PDAP1-204ENST00000496335 TTYH1Q9H313 450 aaPredicted RBP16.48■□□□□ 0.23
PDAP1-204ENST00000496335 COL6A3P12111 3177 aa16.47■□□□□ 0.23
PDAP1-204ENST00000496335 DHX15O43143 795 aaKnown RBP16.47■□□□□ 0.23
PDAP1-204ENST00000496335 NBNO60934 754 aa16.47■□□□□ 0.23
PDAP1-204ENST00000496335 CDKL5O76039 1030 aa16.47■□□□□ 0.23
PDAP1-204ENST00000496335 CTDNEP1O95476 244 aa16.47■□□□□ 0.23
PDAP1-204ENST00000496335 DNAJB2P25686 324 aa16.47■□□□□ 0.23
PDAP1-204ENST00000496335 THPOP40225 353 aa16.47■□□□□ 0.23
PDAP1-204ENST00000496335 ACTR2P61160 394 aa16.47■□□□□ 0.23
PDAP1-204ENST00000496335 ME3Q16798 604 aa16.47■□□□□ 0.23
PDAP1-204ENST00000496335 TRAF7Q6Q0C0 670 aa16.47■□□□□ 0.23
PDAP1-204ENST00000496335 LMBR1Q8WVP7 490 aa16.47■□□□□ 0.23
PDAP1-204ENST00000496335 GUCD1Q96NT3 240 aa16.47■□□□□ 0.23
PDAP1-204ENST00000496335 PBX4Q9BYU1 374 aa16.47■□□□□ 0.23
PDAP1-204ENST00000496335 SEMA6BQ9H3T3 888 aa16.47■□□□□ 0.23
PDAP1-204ENST00000496335 SMARCAD1Q9H4L7 1026 aa16.47■□□□□ 0.23
PDAP1-204ENST00000496335 ERAP1Q9NZ08 941 aa16.47■□□□□ 0.23
PDAP1-204ENST00000496335 PCDHA4Q9UN74 947 aa16.47■□□□□ 0.23
PDAP1-204ENST00000496335 KCNJ14Q9UNX9 436 aa16.47■□□□□ 0.23
PDAP1-204ENST00000496335 SLC4A7Q9Y6M7 1214 aa16.47■□□□□ 0.23
PDAP1-204ENST00000496335 IPO5O00410 1097 aaKnown RBP16.46■□□□□ 0.23
PDAP1-204ENST00000496335 LGR5O75473 907 aa16.46■□□□□ 0.23
PDAP1-204ENST00000496335 CCNE2O96020 404 aa16.46■□□□□ 0.23
PDAP1-204ENST00000496335 ADAM17P78536 824 aa16.46■□□□□ 0.23
PDAP1-204ENST00000496335 NPY5RQ15761 445 aa16.46■□□□□ 0.23
PDAP1-204ENST00000496335 PRR16Q569H4 304 aa16.46■□□□□ 0.23
PDAP1-204ENST00000496335 BLIDQ8IZY5 108 aa16.46■□□□□ 0.23
PDAP1-204ENST00000496335 GJB4Q9NTQ9 266 aa16.46■□□□□ 0.23
PDAP1-204ENST00000496335 EMSYQ7Z589 1322 aa16.45■□□□□ 0.22
PDAP1-204ENST00000496335 CDH23Q9H251 3354 aa16.45■□□□□ 0.22
PDAP1-204ENST00000496335 M0R2N6 131 aa16.45■□□□□ 0.22
PDAP1-204ENST00000496335 GNAT1P11488 350 aa16.45■□□□□ 0.22
PDAP1-204ENST00000496335 ACTN1P12814 892 aa16.45■□□□□ 0.22
PDAP1-204ENST00000496335 CIITAP33076 1130 aa16.45■□□□□ 0.22
PDAP1-204ENST00000496335 RABGGTBP53611 331 aa16.45■□□□□ 0.22
PDAP1-204ENST00000496335 PPFIA1Q13136 1202 aa16.45■□□□□ 0.22
PDAP1-204ENST00000496335 MBTPS1Q14703 1052 aa16.45■□□□□ 0.22
PDAP1-204ENST00000496335 TCTN1Q2MV58 587 aa16.45■□□□□ 0.22
PDAP1-204ENST00000496335 TBCKQ8TEA7 893 aa16.45■□□□□ 0.22
PDAP1-204ENST00000496335 ZNF577Q9BSK1 485 aa16.45■□□□□ 0.22
PDAP1-204ENST00000496335 AZI2Q9H6S1 392 aa16.45■□□□□ 0.22
PDAP1-204ENST00000496335 NRCAMQ92823 1304 aa16.45■□□□□ 0.22
PDAP1-204ENST00000496335 STK36Q9NRP7 1315 aa16.45■□□□□ 0.22
PDAP1-204ENST00000496335 MYH9P35579 1960 aaKnown RBP16.44■□□□□ 0.22
PDAP1-204ENST00000496335 RSPH10B2B2RC85 870 aa16.44■□□□□ 0.22
PDAP1-204ENST00000496335 ATG7O95352 703 aa16.44■□□□□ 0.22
PDAP1-204ENST00000496335 CXCL10P02778 98 aa16.44■□□□□ 0.22
PDAP1-204ENST00000496335 CTSHP09668 335 aa16.44■□□□□ 0.22
PDAP1-204ENST00000496335 RSPH10BP0C881 870 aa16.44■□□□□ 0.22
PDAP1-204ENST00000496335 FDPSP14324 419 aaKnown RBP16.44■□□□□ 0.22
PDAP1-204ENST00000496335 GRIK4Q16099 956 aa16.44■□□□□ 0.22
PDAP1-204ENST00000496335 ABHD15Q6UXT9 468 aa16.44■□□□□ 0.22
PDAP1-204ENST00000496335 RUFY4Q6ZNE9 571 aa16.44■□□□□ 0.22
PDAP1-204ENST00000496335 DAGLBQ8NCG7 672 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms