RNA–Protein interactions for RNA: ENST00000496318.5

HLA-DQA1-207, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-207ENST00000496318 SELPP16109 830 aa13.3□□□□□ -0.28
HLA-DQA1-207ENST00000496318 TCF7P36402 384 aaPredicted RBP13.3□□□□□ -0.28
HLA-DQA1-207ENST00000496318 THPOP40225 353 aa13.3□□□□□ -0.28
HLA-DQA1-207ENST00000496318 STK3Q13188 491 aa13.3□□□□□ -0.28
HLA-DQA1-207ENST00000496318 BFSP2Q13515 415 aa13.3□□□□□ -0.28
HLA-DQA1-207ENST00000496318 FAM117BQ6P1L5 589 aa13.3□□□□□ -0.28
HLA-DQA1-207ENST00000496318 RUFY4Q6ZNE9 571 aa13.3□□□□□ -0.28
HLA-DQA1-207ENST00000496318 RPUSD2Q8IZ73 545 aaKnown RBP13.3□□□□□ -0.28
HLA-DQA1-207ENST00000496318 ATP6V0A1Q93050 837 aa13.3□□□□□ -0.28
HLA-DQA1-207ENST00000496318 KATNAL1Q9BW62 490 aa13.3□□□□□ -0.28
HLA-DQA1-207ENST00000496318 RIC8AQ9NPQ8 531 aa13.3□□□□□ -0.28
HLA-DQA1-207ENST00000496318 BARHL2Q9NY43 387 aa13.3□□□□□ -0.28
HLA-DQA1-207ENST00000496318 C17orf102A2RUQ5 167 aa13.29□□□□□ -0.28
HLA-DQA1-207ENST00000496318 CA3P07451 260 aa13.29□□□□□ -0.28
HLA-DQA1-207ENST00000496318 SCG2P13521 617 aa13.29□□□□□ -0.28
HLA-DQA1-207ENST00000496318 ARHGAP4P98171 946 aa13.29□□□□□ -0.28
HLA-DQA1-207ENST00000496318 PTK7Q13308 1070 aa13.29□□□□□ -0.28
HLA-DQA1-207ENST00000496318 ITGB3BPQ13352 177 aaPredicted RBP13.29□□□□□ -0.28
HLA-DQA1-207ENST00000496318 MTMR1Q13613 665 aa13.29□□□□□ -0.28
HLA-DQA1-207ENST00000496318 NEDD9Q14511 834 aa13.29□□□□□ -0.28
HLA-DQA1-207ENST00000496318 CCDC85BQ15834 202 aaPredicted RBP13.29□□□□□ -0.28
HLA-DQA1-207ENST00000496318 NTRK3Q16288 839 aa13.29□□□□□ -0.28
HLA-DQA1-207ENST00000496318 KRT40Q6A162 431 aa13.29□□□□□ -0.28
HLA-DQA1-207ENST00000496318 CAGE1Q8TC20 777 aa13.29□□□□□ -0.28
HLA-DQA1-207ENST00000496318 AFAP1L1Q8TED9 768 aa13.29□□□□□ -0.28
HLA-DQA1-207ENST00000496318 LMBR1Q8WVP7 490 aa13.29□□□□□ -0.28
HLA-DQA1-207ENST00000496318 GPRASP2Q96D09 838 aa13.29□□□□□ -0.28
HLA-DQA1-207ENST00000496318 PCYT2Q99447 389 aa13.29□□□□□ -0.28
HLA-DQA1-207ENST00000496318 SLC26A6Q9BXS9 759 aa13.29□□□□□ -0.28
HLA-DQA1-207ENST00000496318 USP26Q9BXU7 913 aa13.29□□□□□ -0.28
HLA-DQA1-207ENST00000496318 VPS54Q9P1Q0 977 aa13.29□□□□□ -0.28
HLA-DQA1-207ENST00000496318 NID2Q14112 1375 aa13.29□□□□□ -0.28
HLA-DQA1-207ENST00000496318 STAM2O75886 525 aa13.28□□□□□ -0.28
HLA-DQA1-207ENST00000496318 REC8O95072 547 aa13.28□□□□□ -0.28
HLA-DQA1-207ENST00000496318 HMGB1P09429 215 aaKnown RBP13.28□□□□□ -0.28
HLA-DQA1-207ENST00000496318 CLK2P49760 499 aaKnown RBP13.28□□□□□ -0.28
HLA-DQA1-207ENST00000496318 WDR5P61964 334 aaKnown RBP13.28□□□□□ -0.28
HLA-DQA1-207ENST00000496318 IGBP1P78318 339 aa13.28□□□□□ -0.28
HLA-DQA1-207ENST00000496318 PFKFB3Q16875 520 aaPredicted RBP13.28□□□□□ -0.28
HLA-DQA1-207ENST00000496318 PPP2R2DQ66LE6 453 aa13.28□□□□□ -0.28
HLA-DQA1-207ENST00000496318 NLRX1Q86UT6 975 aa13.28□□□□□ -0.28
HLA-DQA1-207ENST00000496318 SERINC5Q86VE9 423 aa13.28□□□□□ -0.28
HLA-DQA1-207ENST00000496318 CCDC155Q8N6L0 562 aa13.28□□□□□ -0.28
HLA-DQA1-207ENST00000496318 TRAPPC12Q8WVT3 735 aa13.28□□□□□ -0.28
HLA-DQA1-207ENST00000496318 AIFM3Q96NN9 605 aa13.28□□□□□ -0.28
HLA-DQA1-207ENST00000496318 AGXT2Q9BYV1 514 aa13.28□□□□□ -0.28
HLA-DQA1-207ENST00000496318 MTIF3Q9H2K0 278 aaKnown RBP13.28□□□□□ -0.28
HLA-DQA1-207ENST00000496318 JADE2Q9NQC1 790 aa13.28□□□□□ -0.28
HLA-DQA1-207ENST00000496318 KCNH7Q9NS40 1196 aa13.28□□□□□ -0.28
HLA-DQA1-207ENST00000496318 PPP4R2Q9NY27 417 aa13.28□□□□□ -0.28
HLA-DQA1-207ENST00000496318 MSRAQ9UJ68 235 aa13.28□□□□□ -0.28
HLA-DQA1-207ENST00000496318 FAM86B1E9PN63 330 aa13.27□□□□□ -0.29
HLA-DQA1-207ENST00000496318 FAM86B2P0C5J1 330 aa13.27□□□□□ -0.29
HLA-DQA1-207ENST00000496318 PDIA3P30101 505 aaKnown RBP13.27□□□□□ -0.29
HLA-DQA1-207ENST00000496318 HOXC8P31273 242 aa13.27□□□□□ -0.29
HLA-DQA1-207ENST00000496318 RBL2Q08999 1139 aa13.27□□□□□ -0.29
HLA-DQA1-207ENST00000496318 RAB30Q15771 203 aa13.27□□□□□ -0.29
HLA-DQA1-207ENST00000496318 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.27□□□□□ -0.29
HLA-DQA1-207ENST00000496318 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.27□□□□□ -0.29
HLA-DQA1-207ENST00000496318 MICALL1Q8N3F8 863 aa13.27□□□□□ -0.29
HLA-DQA1-207ENST00000496318 GJA10Q969M2 543 aa13.27□□□□□ -0.29
HLA-DQA1-207ENST00000496318 MXRA8Q9BRK3 442 aa13.27□□□□□ -0.29
HLA-DQA1-207ENST00000496318 RALGAPA2Q2PPJ7 1873 aa13.27□□□□□ -0.29
HLA-DQA1-207ENST00000496318 TTC3P53804 2025 aa13.27□□□□□ -0.29
HLA-DQA1-207ENST00000496318 TMEM265A0A087WTH1 108 aa13.26□□□□□ -0.29
HLA-DQA1-207ENST00000496318 CCNE2O96020 404 aa13.26□□□□□ -0.29
HLA-DQA1-207ENST00000496318 ACTN1P12814 892 aa13.26□□□□□ -0.29
HLA-DQA1-207ENST00000496318 IGFBP4P22692 258 aa13.26□□□□□ -0.29
HLA-DQA1-207ENST00000496318 RFC2P35250 354 aa13.26□□□□□ -0.29
HLA-DQA1-207ENST00000496318 SREBF1P36956 1147 aa13.26□□□□□ -0.29
HLA-DQA1-207ENST00000496318 COL4A6Q14031 1691 aa13.26□□□□□ -0.29
HLA-DQA1-207ENST00000496318 PPP1R18Q6NYC8 613 aa13.26□□□□□ -0.29
HLA-DQA1-207ENST00000496318 XRRA1Q6P2D8 792 aa13.26□□□□□ -0.29
HLA-DQA1-207ENST00000496318 RUFY3Q7L099 469 aa13.26□□□□□ -0.29
HLA-DQA1-207ENST00000496318 HERC6Q8IVU3 1022 aa13.26□□□□□ -0.29
HLA-DQA1-207ENST00000496318 DBF4BQ8NFT6 615 aa13.26□□□□□ -0.29
HLA-DQA1-207ENST00000496318 SENP7Q9BQF6 1050 aa13.26□□□□□ -0.29
HLA-DQA1-207ENST00000496318 SLC28A3Q9HAS3 691 aa13.26□□□□□ -0.29
HLA-DQA1-207ENST00000496318 ZSWIM6Q9HCJ5 1215 aa13.26□□□□□ -0.29
HLA-DQA1-207ENST00000496318 MTUS1Q9ULD2 1270 aa13.26□□□□□ -0.29
HLA-DQA1-207ENST00000496318 BDP1A6H8Y1 2624 aa13.26□□□□□ -0.29
HLA-DQA1-207ENST00000496318 FNDC1Q4ZHG4 1894 aaPredicted RBP13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 ARID2Q68CP9 1835 aa13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 RSPH10B2B2RC85 870 aa13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 DLL1O00548 723 aa13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 PRPF3O43395 683 aaKnown RBP13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 EDIL3O43854 480 aa13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 CXCL10P02778 98 aa13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 PFKMP08237 780 aa13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 RSPH10BP0C881 870 aa13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 ACTR2P61160 394 aa13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 ADAM17P78536 824 aa13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 TMEM62Q0P6H9 643 aa13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 GRIK4Q16099 956 aa13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 CEP55Q53EZ4 464 aa13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 CNKSR3Q6P9H4 555 aa13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 TRMT1LQ7Z2T5 733 aaKnown RBP13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 GLG1Q92896 1179 aa13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 AGO4Q9HCK5 861 aaKnown RBP13.25□□□□□ -0.29
HLA-DQA1-207ENST00000496318 JPH1Q9HDC5 661 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms