RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 PAK1Q13153 545 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 SEPT2Q15019 361 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 CALCRLQ16602 461 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 SPECC1Q5M775 1068 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 MSL1Q68DK7 614 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 SPECC1LQ69YQ0 1117 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 CNNM4Q6P4Q7 775 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 TMC6Q7Z403 805 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 KIAA0825Q8IV33 1275 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 ANKMY2Q8IV38 441 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 SLC9A9Q8IVB4 645 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 VSTM4Q8IW00 320 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 C4orf32Q8N8J7 132 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 AGBL3Q8NEM8 1001 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 C7orf43Q8WVR3 580 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 ERCC4Q92889 916 aaPredicted RBP9.66□□□□□ -0.86
EPHA4-213ENST00000495693 SHISA4Q96DD7 197 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 MTMR8Q96EF0 704 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 EPSTI1Q96J88 318 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 CDK5RAP3Q96JB5 506 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 PIGSQ96S52 555 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 NT5C3AQ9H0P0 336 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 KCNF1Q9H3M0 494 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 EHMT1Q9H9B1 1298 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 DDX4Q9NQI0 724 aaKnown RBP9.66□□□□□ -0.86
EPHA4-213ENST00000495693 PNMA2Q9UL42 364 aa9.66□□□□□ -0.86
EPHA4-213ENST00000495693 R3HCC1Q9Y3T6 440 aaKnown RBP9.66□□□□□ -0.86
EPHA4-213ENST00000495693 ITIH6Q6UXX5 1313 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 SFI1A8K8P3 1242 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 H7C1D1 291 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 KIF20AO95235 890 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 RPN1P04843 607 aaKnown RBP9.65□□□□□ -0.86
EPHA4-213ENST00000495693 GOLGA8HP0CJ92 632 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 ZNF18P17022 549 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 AFMP43652 599 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 TNNI2P48788 182 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 USP11P51784 963 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 HIRAP54198 1017 aaPredicted RBP9.65□□□□□ -0.86
EPHA4-213ENST00000495693 TGFB2P61812 414 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 KRT76Q01546 638 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 GRIN1Q05586 938 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 ELOAQ14241 798 aaKnown RBP9.65□□□□□ -0.86
EPHA4-213ENST00000495693 ABCB5Q2M3G0 1257 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 LETM2Q2VYF4 491 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 COBLL1Q53SF7 1204 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 KRT79Q5XKE5 535 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 SLFN13Q68D06 897 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 FOXR1Q6PIV2 292 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 CABP7Q86V35 215 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 SLFN12Q8IYM2 578 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 LRRC47Q8N1G4 583 aaKnown RBP9.65□□□□□ -0.86
EPHA4-213ENST00000495693 TBCKQ8TEA7 893 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 CACTINQ8WUQ7 758 aaKnown RBP9.65□□□□□ -0.86
EPHA4-213ENST00000495693 CCDC51Q96ER9 411 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 CCDC97Q96F63 343 aaPredicted RBP9.65□□□□□ -0.86
EPHA4-213ENST00000495693 ZNF830Q96NB3 372 aaPredicted RBP9.65□□□□□ -0.86
EPHA4-213ENST00000495693 COL25A1Q9BXS0 654 aaPredicted RBP9.65□□□□□ -0.86
EPHA4-213ENST00000495693 NUCKS1Q9H1E3 243 aaKnown RBP9.65□□□□□ -0.86
EPHA4-213ENST00000495693 FANCLQ9NW38 375 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 MTMR7Q9Y216 660 aa9.65□□□□□ -0.86
EPHA4-213ENST00000495693 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.65□□□□□ -0.86
EPHA4-213ENST00000495693 TBX3O15119 743 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 ARHGAP6O43182 974 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 MARCH6O60337 910 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 RHOBTB3O94955 611 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 THBS1P07996 1170 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 GTF2F1P35269 517 aaKnown RBP eCLIP9.64□□□□□ -0.87
EPHA4-213ENST00000495693 TNFAIP1Q13829 316 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 UBAP2LQ14157 1087 aaKnown RBP9.64□□□□□ -0.87
EPHA4-213ENST00000495693 DLGAP5Q15398 846 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 PTPN14Q15678 1187 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 EZH2Q15910 746 aaKnown RBP9.64□□□□□ -0.87
EPHA4-213ENST00000495693 AOC3Q16853 763 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 HAUS3Q68CZ6 603 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 FOXR2Q6PJQ5 311 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 FAM83AQ86UY5 434 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 CNGA4Q8IV77 575 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 NIM1KQ8IY84 436 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 ADGRF4Q8IZF3 695 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 PGBD3Q8N328 593 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 IGSF22Q8N9C0 903 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 TSEN2Q8NCE0 465 aaKnown RBP9.64□□□□□ -0.87
EPHA4-213ENST00000495693 MYRIPQ8NFW9 859 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 ZDHHC1Q8WTX9 485 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 FAM151AQ8WW52 585 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 DHTKD1Q96HY7 919 aaPredicted RBP9.64□□□□□ -0.87
EPHA4-213ENST00000495693 AMNQ9BXJ7 453 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 PSTPIP2Q9H939 334 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 VAT1LQ9HCJ6 419 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 GPAMQ9HCL2 828 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 KBTBD4Q9NVX7 518 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 MAGEC2Q9UBF1 373 aaPredicted RBP9.64□□□□□ -0.87
EPHA4-213ENST00000495693 RABGAP1Q9Y3P9 1069 aa9.64□□□□□ -0.87
EPHA4-213ENST00000495693 FRMPD2Q68DX3 1309 aaPredicted RBP9.63□□□□□ -0.87
EPHA4-213ENST00000495693 UQCRHLA0A096LP55 91 aa9.63□□□□□ -0.87
EPHA4-213ENST00000495693 PVALEFA0A1B0GWK0 134 aa9.63□□□□□ -0.87
EPHA4-213ENST00000495693 STX10O60499 249 aa9.63□□□□□ -0.87
EPHA4-213ENST00000495693 UQCRHP07919 91 aa9.63□□□□□ -0.87
EPHA4-213ENST00000495693 VIL1P09327 827 aaKnown RBP9.63□□□□□ -0.87
EPHA4-213ENST00000495693 LORP23490 312 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms