RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 PLVAPQ9BX97 442 aa12.98□□□□□ -0.33
CLCNKA-206ENST00000491433 MLXIPQ9HAP2 919 aa12.98□□□□□ -0.33
CLCNKA-206ENST00000491433 SUPT16HQ9Y5B9 1047 aaKnown RBP12.98□□□□□ -0.33
CLCNKA-206ENST00000491433 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.97□□□□□ -0.33
CLCNKA-206ENST00000491433 H3BRB1 525 aa12.97□□□□□ -0.33
CLCNKA-206ENST00000491433 DHX16O60231 1041 aaKnown RBP12.97□□□□□ -0.33
CLCNKA-206ENST00000491433 GGPS1O95749 300 aa12.97□□□□□ -0.33
CLCNKA-206ENST00000491433 HOXC8P31273 242 aa12.97□□□□□ -0.33
CLCNKA-206ENST00000491433 DMWDQ09019 674 aa12.97□□□□□ -0.33
CLCNKA-206ENST00000491433 HYAL1Q12794 435 aa12.97□□□□□ -0.33
CLCNKA-206ENST00000491433 TRAF1Q13077 416 aa12.97□□□□□ -0.33
CLCNKA-206ENST00000491433 IQCA1Q86XH1 822 aa12.97□□□□□ -0.33
CLCNKA-206ENST00000491433 ADGRF4Q8IZF3 695 aa12.97□□□□□ -0.33
CLCNKA-206ENST00000491433 TBC1D5Q92609 795 aa12.97□□□□□ -0.33
CLCNKA-206ENST00000491433 C16orf70Q9BSU1 422 aa12.97□□□□□ -0.33
CLCNKA-206ENST00000491433 USP26Q9BXU7 913 aa12.97□□□□□ -0.33
CLCNKA-206ENST00000491433 UBA5Q9GZZ9 404 aa12.97□□□□□ -0.33
CLCNKA-206ENST00000491433 TUT1Q9H6E5 874 aaKnown RBP12.97□□□□□ -0.33
CLCNKA-206ENST00000491433 COL20A1Q9P218 1284 aa12.97□□□□□ -0.33
CLCNKA-206ENST00000491433 ZBTB47Q9UFB7 747 aaPredicted RBP12.97□□□□□ -0.33
CLCNKA-206ENST00000491433 KAT6AQ92794 2004 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 ATG2AQ2TAZ0 1938 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 ADGRA3Q8IWK6 1321 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 FSD2A1L4K1 749 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 SOBPA7XYQ1 873 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 CFBP00751 764 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 LMNAP02545 664 aaKnown RBP12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 MMP1P03956 469 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 GOLGA8HP0CJ92 632 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 MX1P20591 662 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 SDHBP21912 280 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 NDUFV1P49821 464 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 RSPO4Q2I0M5 234 aaPredicted RBP12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 HSDL1Q3SXM5 330 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 MCMDC2Q4G0Z9 681 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 NAALADL2Q58DX5 795 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 VPS53Q5VIR6 699 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 PNMA1Q8ND90 353 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 CLP1Q92989 425 aaKnown RBP12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 RIPOR3Q96MK2 946 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 HINFPQ9BQA5 517 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 AMNQ9BXJ7 453 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 SEMA4AQ9H3S1 761 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 KAT14Q9H8E8 782 aa12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 ZNF215Q9UL58 517 aaPredicted RBP12.96□□□□□ -0.33
CLCNKA-206ENST00000491433 LOC730098B7Z3J9 87 aa12.95□□□□□ -0.34
CLCNKA-206ENST00000491433 NOP56O00567 594 aaKnown RBP12.95□□□□□ -0.34
CLCNKA-206ENST00000491433 TREHO43280 583 aa12.95□□□□□ -0.34
CLCNKA-206ENST00000491433 EYA4O95677 639 aa12.95□□□□□ -0.34
CLCNKA-206ENST00000491433 SMIM10L2AP0DMW4 78 aa12.95□□□□□ -0.34
CLCNKA-206ENST00000491433 SMIM10L2BP0DMW5 78 aa12.95□□□□□ -0.34
CLCNKA-206ENST00000491433 MYCLP12524 364 aaPredicted RBP12.95□□□□□ -0.34
CLCNKA-206ENST00000491433 CCND2P30279 289 aa12.95□□□□□ -0.34
CLCNKA-206ENST00000491433 HSD17B4P51659 736 aa12.95□□□□□ -0.34
CLCNKA-206ENST00000491433 MFAP1P55081 439 aaKnown RBP12.95□□□□□ -0.34
CLCNKA-206ENST00000491433 GHRHRQ02643 423 aa12.95□□□□□ -0.34
CLCNKA-206ENST00000491433 ADAM15Q13444 863 aa12.95□□□□□ -0.34
CLCNKA-206ENST00000491433 QRICH1Q2TAL8 776 aa12.95□□□□□ -0.34
CLCNKA-206ENST00000491433 GNPTABQ3T906 1256 aa12.95□□□□□ -0.34
CLCNKA-206ENST00000491433 FAM26DQ5JW98 314 aa12.95□□□□□ -0.34
CLCNKA-206ENST00000491433 P2RX5Q93086 422 aa12.95□□□□□ -0.34
CLCNKA-206ENST00000491433 PDCD2LQ9BRP1 358 aa12.95□□□□□ -0.34
CLCNKA-206ENST00000491433 RNPEPQ9H4A4 650 aa12.95□□□□□ -0.34
CLCNKA-206ENST00000491433 IGFLR1Q9H665 355 aa12.95□□□□□ -0.34
CLCNKA-206ENST00000491433 ZFYVE26Q68DK2 2539 aa12.95□□□□□ -0.34
CLCNKA-206ENST00000491433 GRM6O15303 877 aa12.94□□□□□ -0.34
CLCNKA-206ENST00000491433 STAM2O75886 525 aa12.94□□□□□ -0.34
CLCNKA-206ENST00000491433 PDGFBP01127 241 aaPredicted RBP12.94□□□□□ -0.34
CLCNKA-206ENST00000491433 LGALS2P05162 132 aa12.94□□□□□ -0.34
CLCNKA-206ENST00000491433 RPLP2P05387 115 aaKnown RBP12.94□□□□□ -0.34
CLCNKA-206ENST00000491433 CTSHP09668 335 aa12.94□□□□□ -0.34
CLCNKA-206ENST00000491433 PARP1P09874 1014 aaKnown RBP12.94□□□□□ -0.34
CLCNKA-206ENST00000491433 DLX2Q07687 328 aaPredicted RBP12.94□□□□□ -0.34
CLCNKA-206ENST00000491433 BTG3Q14201 252 aaPredicted RBP12.94□□□□□ -0.34
CLCNKA-206ENST00000491433 NEDD9Q14511 834 aa12.94□□□□□ -0.34
CLCNKA-206ENST00000491433 HIC1Q14526 733 aa12.94□□□□□ -0.34
CLCNKA-206ENST00000491433 CBX2Q14781 532 aaPredicted RBP12.94□□□□□ -0.34
CLCNKA-206ENST00000491433 PGM5Q15124 567 aa12.94□□□□□ -0.34
CLCNKA-206ENST00000491433 STOX1Q6ZVD7 989 aa12.94□□□□□ -0.34
CLCNKA-206ENST00000491433 RSPH3Q86UC2 560 aa12.94□□□□□ -0.34
CLCNKA-206ENST00000491433 VSIG10LQ86VR7 867 aa12.94□□□□□ -0.34
CLCNKA-206ENST00000491433 TMEM105Q8N8V8 129 aa12.94□□□□□ -0.34
CLCNKA-206ENST00000491433 MYO7AQ13402 2215 aa12.94□□□□□ -0.34
CLCNKA-206ENST00000491433 TBX10O75333 385 aa12.93□□□□□ -0.34
CLCNKA-206ENST00000491433 UBA1P22314 1058 aaKnown RBP12.93□□□□□ -0.34
CLCNKA-206ENST00000491433 COASYQ13057 564 aa12.93□□□□□ -0.34
CLCNKA-206ENST00000491433 SMRP1Q8NCR6 262 aa12.93□□□□□ -0.34
CLCNKA-206ENST00000491433 MSLNLQ96KJ4 702 aa12.93□□□□□ -0.34
CLCNKA-206ENST00000491433 NRCAMQ92823 1304 aa12.92□□□□□ -0.34
CLCNKA-206ENST00000491433 TRIM6-TRIM34B2RNG4 842 aa12.92□□□□□ -0.34
CLCNKA-206ENST00000491433 ICAM3P32942 547 aa12.92□□□□□ -0.34
CLCNKA-206ENST00000491433 HAND2P61296 217 aa12.92□□□□□ -0.34
CLCNKA-206ENST00000491433 PTPN21Q16825 1174 aa12.92□□□□□ -0.34
CLCNKA-206ENST00000491433 TAF2Q6P1X5 1199 aa12.92□□□□□ -0.34
CLCNKA-206ENST00000491433 EFHBQ8N7U6 833 aa12.92□□□□□ -0.34
CLCNKA-206ENST00000491433 ZNF689Q96CS4 500 aaPredicted RBP12.92□□□□□ -0.34
CLCNKA-206ENST00000491433 PHF7Q9BWX1 381 aaPredicted RBP12.92□□□□□ -0.34
CLCNKA-206ENST00000491433 CPVLQ9H3G5 476 aa12.92□□□□□ -0.34
CLCNKA-206ENST00000491433 JMJD4Q9H9V9 463 aa12.92□□□□□ -0.34
CLCNKA-206ENST00000491433 VAT1LQ9HCJ6 419 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms