RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 PCMTD2Q9NV79 361 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 POLLQ9UGP5 575 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 FNDC3AQ9Y2H6 1198 aaKnown RBP7.57□□□□□ -1.2
PDCD4-209ENST00000489049 RAXQ9Y2V3 346 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 C10orf71Q711Q0 1435 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 CEP350Q5VT06 3117 aa7.57□□□□□ -1.2
PDCD4-209ENST00000489049 MYH15Q9Y2K3 1946 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 SMTNL1A8MU46 457 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 GOLGA6L19H0YKK7 550 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 SMNDC1O75940 238 aaKnown RBP eCLIP7.56□□□□□ -1.2
PDCD4-209ENST00000489049 KIF4AO95239 1232 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 WISP1O95388 367 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 PTMAP06454 111 aaKnown RBP7.56□□□□□ -1.2
PDCD4-209ENST00000489049 MMP10P09238 476 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 TOP1P11387 765 aaKnown RBP7.56□□□□□ -1.2
PDCD4-209ENST00000489049 SCG2P13521 617 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 CDC25BP30305 580 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 KRT2P35908 639 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 BTDP43251 543 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 NOVP48745 357 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 ZNF165P49910 485 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 TFAP4Q01664 338 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 GRM4Q14833 912 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 PTPAQ15257 358 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 PFKFB3Q16875 520 aaPredicted RBP7.56□□□□□ -1.2
PDCD4-209ENST00000489049 AXDND1Q5T1B0 1012 aaPredicted RBP7.56□□□□□ -1.2
PDCD4-209ENST00000489049 STRIP1Q5VSL9 837 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 TTC39BQ5VTQ0 682 aaPredicted RBP7.56□□□□□ -1.2
PDCD4-209ENST00000489049 RESP18Q5W5W9 173 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 TXNDC11Q6PKC3 985 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 SARM1Q6SZW1 724 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 SMIM5Q71RC9 77 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 KRTAP1-3Q8IUG1 177 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 GPR152Q8TDT2 470 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 SH3RF3Q8TEJ3 882 aaPredicted RBP7.56□□□□□ -1.2
PDCD4-209ENST00000489049 CCDC17Q96LX7 622 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 UBL7Q96S82 380 aaPredicted RBP7.56□□□□□ -1.2
PDCD4-209ENST00000489049 PHF20Q9BVI0 1012 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 GTPBP4Q9BZE4 634 aaKnown RBP7.56□□□□□ -1.2
PDCD4-209ENST00000489049 DHX36Q9H2U1 1008 aaKnown RBP7.56□□□□□ -1.2
PDCD4-209ENST00000489049 STK32BQ9NY57 414 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 STIM2Q9P246 746 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 SEPT3Q9UH03 358 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 HPSEQ9Y251 543 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 SRPRBQ9Y5M8 271 aaKnown RBP7.56□□□□□ -1.2
PDCD4-209ENST00000489049 CLIC4Q9Y696 253 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 TACC3Q9Y6A5 838 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 MRVI1Q9Y6F6 885 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 COL4A1P02462 1669 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 PLIN4Q96Q06 1357 aa7.56□□□□□ -1.2
PDCD4-209ENST00000489049 WTIPA6NIX2 430 aaPredicted RBP7.55□□□□□ -1.2
PDCD4-209ENST00000489049 LAD1O00515 517 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 TM4SF5O14894 197 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 GSC2O15499 205 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 ZNF500O60304 480 aaPredicted RBP7.55□□□□□ -1.2
PDCD4-209ENST00000489049 NEMFO60524 1076 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 ZNF202O95125 648 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 ADCY5O95622 1261 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 HOXA7P31268 230 aaPredicted RBP7.55□□□□□ -1.2
PDCD4-209ENST00000489049 SSTR4P31391 388 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 CD68P34810 354 aaPredicted RBP7.55□□□□□ -1.2
PDCD4-209ENST00000489049 SYKP43405 635 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 CD97P48960 835 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 RHBDL3P58872 404 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 CEBPZQ03701 1054 aaKnown RBP7.55□□□□□ -1.2
PDCD4-209ENST00000489049 KCNA1Q09470 495 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 KIAA2012Q0VF49 1180 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 ZNF827Q17R98 1081 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 SOGA3Q5TF21 947 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 ARL6IP4Q66PJ3 421 aaKnown RBP7.55□□□□□ -1.2
PDCD4-209ENST00000489049 MCTP2Q6DN12 878 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 RCSD1Q6JBY9 416 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 ADAMTSL4Q6UY14 1074 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 TRIML1Q8N9V2 468 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 DAGLBQ8NCG7 672 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 TGFBRAP1Q8WUH2 860 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 TEKT1Q969V4 418 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 ZKSCAN3Q9BRR0 538 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 SPZ1Q9BXG8 430 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 GLT8D2Q9H1C3 349 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 EHD4Q9H223 541 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 RASSF4Q9H2L5 321 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 INCENPQ9NQS7 918 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 ABI2Q9NYB9 513 aaPredicted RBP7.55□□□□□ -1.2
PDCD4-209ENST00000489049 SYNPO2Q9UMS6 1093 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 ZKSCAN5Q9Y2L8 839 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 LAMB1P07942 1786 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 DLEC1Q9Y238 1755 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 TAF1P21675 1872 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 LTBP1Q14766 1721 aa7.55□□□□□ -1.2
PDCD4-209ENST00000489049 BECN2A8MW95 431 aa7.54□□□□□ -1.2
PDCD4-209ENST00000489049 KIF28PB7ZC32 967 aa7.54□□□□□ -1.2
PDCD4-209ENST00000489049 IKBKBO14920 756 aa7.54□□□□□ -1.2
PDCD4-209ENST00000489049 ZBTB39O15060 712 aa7.54□□□□□ -1.2
PDCD4-209ENST00000489049 SMC2O95347 1197 aa7.54□□□□□ -1.2
PDCD4-209ENST00000489049 HLA-DOAP06340 250 aa7.54□□□□□ -1.2
PDCD4-209ENST00000489049 CDK8P49336 464 aa7.54□□□□□ -1.2
PDCD4-209ENST00000489049 NDUFA8P51970 172 aa7.54□□□□□ -1.2
PDCD4-209ENST00000489049 C1QTNF8P60827 252 aa7.54□□□□□ -1.2
PDCD4-209ENST00000489049 TRAF1Q13077 416 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms