RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 CALM2P0DP24 149 aa22.11■■□□□ 1.13
COL27A1-205ENST00000485397 CALM3P0DP25 149 aa22.11■■□□□ 1.13
COL27A1-205ENST00000485397 KCNA2P16389 499 aa22.11■■□□□ 1.13
COL27A1-205ENST00000485397 ITGB5P18084 799 aa22.11■■□□□ 1.13
COL27A1-205ENST00000485397 COL9A1P20849 921 aa22.11■■□□□ 1.13
COL27A1-205ENST00000485397 GPRASP2Q96D09 838 aa22.11■■□□□ 1.13
COL27A1-205ENST00000485397 PKD2L1Q9P0L9 805 aa22.11■■□□□ 1.13
COL27A1-205ENST00000485397 SLC12A7Q9Y666 1083 aa22.11■■□□□ 1.13
COL27A1-205ENST00000485397 MICAL3Q7RTP6 2002 aa22.11■■□□□ 1.13
COL27A1-205ENST00000485397 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.1■■□□□ 1.13
COL27A1-205ENST00000485397 TCF7P36402 384 aaPredicted RBP22.1■■□□□ 1.13
COL27A1-205ENST00000485397 TMTC3Q6ZXV5 915 aa22.1■■□□□ 1.13
COL27A1-205ENST00000485397 FANCBQ8NB91 859 aa22.1■■□□□ 1.13
COL27A1-205ENST00000485397 GIMAP8Q8ND71 665 aaPredicted RBP22.1■■□□□ 1.13
COL27A1-205ENST00000485397 SP7Q8TDD2 431 aaPredicted RBP22.1■■□□□ 1.13
COL27A1-205ENST00000485397 ANO2Q9NQ90 1003 aa22.1■■□□□ 1.13
COL27A1-205ENST00000485397 UBIAD1Q9Y5Z9 338 aa22.1■■□□□ 1.13
COL27A1-205ENST00000485397 GSTTP1A0A1W2PQM5 241 aa22.09■■□□□ 1.13
COL27A1-205ENST00000485397 UPP2O95045 317 aa22.09■■□□□ 1.13
COL27A1-205ENST00000485397 FAM26DQ5JW98 314 aa22.09■■□□□ 1.13
COL27A1-205ENST00000485397 RUFY4Q6ZNE9 571 aa22.09■■□□□ 1.13
COL27A1-205ENST00000485397 MICU3Q86XE3 530 aa22.09■■□□□ 1.13
COL27A1-205ENST00000485397 FBXO22Q8NEZ5 403 aa22.09■■□□□ 1.13
COL27A1-205ENST00000485397 TOP1MTQ969P6 601 aa22.09■■□□□ 1.13
COL27A1-205ENST00000485397 PCDHA6Q9UN73 950 aa22.09■■□□□ 1.13
COL27A1-205ENST00000485397 PCDHA8Q9Y5H6 950 aa22.09■■□□□ 1.13
COL27A1-205ENST00000485397 TRANK1O15050 2925 aa22.09■■□□□ 1.13
COL27A1-205ENST00000485397 REV3LO60673 3130 aa22.09■■□□□ 1.13
COL27A1-205ENST00000485397 NRCAMQ92823 1304 aa22.08■■□□□ 1.13
COL27A1-205ENST00000485397 MARK3P27448 753 aa22.08■■□□□ 1.13
COL27A1-205ENST00000485397 HEATR3Q7Z4Q2 680 aa22.08■■□□□ 1.13
COL27A1-205ENST00000485397 SKAP1Q86WV1 359 aa22.08■■□□□ 1.13
COL27A1-205ENST00000485397 SEPT1Q8WYJ6 367 aa22.08■■□□□ 1.13
COL27A1-205ENST00000485397 CDHR1Q96JP9 859 aa22.08■■□□□ 1.13
COL27A1-205ENST00000485397 YME1L1Q96TA2 773 aa22.08■■□□□ 1.13
COL27A1-205ENST00000485397 RAPGEFL1Q9UHV5 662 aa22.08■■□□□ 1.13
COL27A1-205ENST00000485397 SPDYE3A6NKU9 549 aa22.07■■□□□ 1.12
COL27A1-205ENST00000485397 CHRNA1P02708 482 aa22.07■■□□□ 1.12
COL27A1-205ENST00000485397 PPFIA1Q13136 1202 aa22.07■■□□□ 1.12
COL27A1-205ENST00000485397 MTMR1Q13613 665 aa22.07■■□□□ 1.12
COL27A1-205ENST00000485397 SGMS1Q86VZ5 419 aa22.07■■□□□ 1.12
COL27A1-205ENST00000485397 IFIH1Q9BYX4 1025 aaKnown RBP22.07■■□□□ 1.12
COL27A1-205ENST00000485397 JADE2Q9NQC1 790 aa22.07■■□□□ 1.12
COL27A1-205ENST00000485397 SIP14410 1827 aa22.07■■□□□ 1.12
COL27A1-205ENST00000485397 EPC2Q52LR7 807 aa22.06■■□□□ 1.12
COL27A1-205ENST00000485397 APBB2Q92870 758 aa22.06■■□□□ 1.12
COL27A1-205ENST00000485397 GHRP10912 638 aa22.05■■□□□ 1.12
COL27A1-205ENST00000485397 GRIK4Q16099 956 aa22.05■■□□□ 1.12
COL27A1-205ENST00000485397 WWC2Q6AWC2 1192 aa22.05■■□□□ 1.12
COL27A1-205ENST00000485397 GLG1Q92896 1179 aa22.05■■□□□ 1.12
COL27A1-205ENST00000485397 TCEANC2Q96MN5 208 aa22.05■■□□□ 1.12
COL27A1-205ENST00000485397 UBE2ZQ9H832 354 aaPredicted RBP22.05■■□□□ 1.12
COL27A1-205ENST00000485397 ERAP1Q9NZ08 941 aa22.05■■□□□ 1.12
COL27A1-205ENST00000485397 BRWD1Q9NSI6 2320 aa22.05■■□□□ 1.12
COL27A1-205ENST00000485397 MGAT3Q09327 533 aa22.04■■□□□ 1.12
COL27A1-205ENST00000485397 MARCH8Q5T0T0 291 aa22.04■■□□□ 1.12
COL27A1-205ENST00000485397 TYW1BQ6NUM6 668 aa22.04■■□□□ 1.12
COL27A1-205ENST00000485397 TAF2Q6P1X5 1199 aa22.04■■□□□ 1.12
COL27A1-205ENST00000485397 SYNE3Q6ZMZ3 975 aa22.04■■□□□ 1.12
COL27A1-205ENST00000485397 RPAINQ86UA6 219 aa22.04■■□□□ 1.12
COL27A1-205ENST00000485397 DNAJB3Q8WWF6 145 aa22.04■■□□□ 1.12
COL27A1-205ENST00000485397 ZBTB10Q96DT7 871 aa22.04■■□□□ 1.12
COL27A1-205ENST00000485397 PGBD1Q96JS3 809 aa22.04■■□□□ 1.12
COL27A1-205ENST00000485397 NEK1Q96PY6 1258 aa22.04■■□□□ 1.12
COL27A1-205ENST00000485397 PCYT2Q99447 389 aa22.04■■□□□ 1.12
COL27A1-205ENST00000485397 SMARCAD1Q9H4L7 1026 aa22.04■■□□□ 1.12
COL27A1-205ENST00000485397 CNTNAP5Q8WYK1 1306 aa22.04■■□□□ 1.12
COL27A1-205ENST00000485397 XIRP2A4UGR9 3374 aa22.04■■□□□ 1.12
COL27A1-205ENST00000485397 KAT6AQ92794 2004 aa22.03■■□□□ 1.12
COL27A1-205ENST00000485397 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.03■■□□□ 1.12
COL27A1-205ENST00000485397 IGBP1P78318 339 aa22.03■■□□□ 1.12
COL27A1-205ENST00000485397 GPM6BQ13491 265 aa22.03■■□□□ 1.12
COL27A1-205ENST00000485397 APOA5Q6Q788 366 aa22.03■■□□□ 1.12
COL27A1-205ENST00000485397 TMEM192Q8IY95 271 aa22.03■■□□□ 1.12
COL27A1-205ENST00000485397 CYP2W1Q8TAV3 490 aa22.03■■□□□ 1.12
COL27A1-205ENST00000485397 MRPL38Q96DV4 380 aaKnown RBP22.03■■□□□ 1.12
COL27A1-205ENST00000485397 SAMD11Q96NU1 681 aa22.03■■□□□ 1.12
COL27A1-205ENST00000485397 EPHX3Q9H6B9 360 aa22.03■■□□□ 1.12
COL27A1-205ENST00000485397 EHMT1Q9H9B1 1298 aa22.03■■□□□ 1.12
COL27A1-205ENST00000485397 TUBE1Q9UJT0 475 aa22.03■■□□□ 1.12
COL27A1-205ENST00000485397 BRPF3Q9ULD4 1205 aa22.03■■□□□ 1.12
COL27A1-205ENST00000485397 MBLAC1A4D2B0 266 aaPredicted RBP22.02■■□□□ 1.12
COL27A1-205ENST00000485397 MAFGO15525 162 aa22.02■■□□□ 1.12
COL27A1-205ENST00000485397 NAPAP54920 295 aa22.02■■□□□ 1.12
COL27A1-205ENST00000485397 EXOSC10Q01780 885 aaKnown RBP22.02■■□□□ 1.12
COL27A1-205ENST00000485397 LPIN1Q14693 890 aa22.02■■□□□ 1.12
COL27A1-205ENST00000485397 RNF20Q5VTR2 975 aa22.02■■□□□ 1.12
COL27A1-205ENST00000485397 RSPH3Q86UC2 560 aa22.02■■□□□ 1.12
COL27A1-205ENST00000485397 MXRA8Q9BRK3 442 aa22.02■■□□□ 1.12
COL27A1-205ENST00000485397 JPH1Q9HDC5 661 aaPredicted RBP22.02■■□□□ 1.12
COL27A1-205ENST00000485397 KCNH7Q9NS40 1196 aa22.02■■□□□ 1.12
COL27A1-205ENST00000485397 RBM28Q9NW13 759 aaKnown RBP22.02■■□□□ 1.12
COL27A1-205ENST00000485397 H3BNC9 293 aa22.01■■□□□ 1.11
COL27A1-205ENST00000485397 ARP10275 920 aa22.01■■□□□ 1.11
COL27A1-205ENST00000485397 INSRRP14616 1297 aa22.01■■□□□ 1.11
COL27A1-205ENST00000485397 KCNA5P22460 613 aa22.01■■□□□ 1.11
COL27A1-205ENST00000485397 FUT2Q10981 343 aa22.01■■□□□ 1.11
COL27A1-205ENST00000485397 RTN1Q16799 776 aa22.01■■□□□ 1.11
COL27A1-205ENST00000485397 PTPROQ16827 1216 aa22.01■■□□□ 1.11
COL27A1-205ENST00000485397 BMP2KLQ5H9B9 411 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms