RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 LCHNA4D1U4 455 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 LINC01553A4QN01 128 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 HAS3O00219 553 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 NBNO60934 754 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 CAND2O75155 1236 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 ARHGEF15O94989 841 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 ZNF286BP0CG31 522 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 TGFB3P10600 412 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 HOXD8P13378 290 aaPredicted RBP10.59□□□□□ -0.71
CPSF4-211ENST00000471455 SDSP20132 328 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 GHRHRQ02643 423 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 KMT5BQ4FZB7 885 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 TIGD5Q53EQ6 642 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 IFIT1BQ5T764 474 aaKnown RBP10.59□□□□□ -0.71
CPSF4-211ENST00000471455 SPATA33Q96N06 139 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 CTAGE1Q96RT6 745 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 LRFN3Q9BTN0 628 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 PRR14Q9BWN1 585 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 CPVLQ9H3G5 476 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 UBE2ZQ9H832 354 aaPredicted RBP10.59□□□□□ -0.71
CPSF4-211ENST00000471455 COL20A1Q9P218 1284 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 MTUS1Q9ULD2 1270 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 FAM50BQ9Y247 325 aa10.59□□□□□ -0.71
CPSF4-211ENST00000471455 C17orf102A2RUQ5 167 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 RSPH10B2B2RC85 870 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 B4E1Z4 1266 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 GPR37L1O60883 481 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 RSPH10BP0C881 870 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 MYCLP12524 364 aaPredicted RBP10.58□□□□□ -0.72
CPSF4-211ENST00000471455 CD46P15529 392 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 CCND2P30279 289 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 THPOP40225 353 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 HSD17B4P51659 736 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 GNPTABQ3T906 1256 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 LEXMQ3ZCV2 418 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 ZNF618Q5T7W0 954 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 ENAHQ8N8S7 591 aaPredicted RBP10.58□□□□□ -0.72
CPSF4-211ENST00000471455 SEPT8Q92599 483 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 TBC1D5Q92609 795 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 PDCD2LQ9BRP1 358 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 DSCC1Q9BVC3 393 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 LNPKQ9C0E8 428 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 EPHX3Q9H6B9 360 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 JMJD4Q9H9V9 463 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 SUGCTQ9HAC7 445 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 MLXIPQ9HAP2 919 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 VAT1LQ9HCJ6 419 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 SIP14410 1827 aa10.58□□□□□ -0.72
CPSF4-211ENST00000471455 PTPRSQ13332 1948 aa10.57□□□□□ -0.72
CPSF4-211ENST00000471455 NOP56O00567 594 aaKnown RBP10.57□□□□□ -0.72
CPSF4-211ENST00000471455 ZBTB5O15062 677 aa10.57□□□□□ -0.72
CPSF4-211ENST00000471455 STAM2O75886 525 aa10.57□□□□□ -0.72
CPSF4-211ENST00000471455 GGPS1O95749 300 aa10.57□□□□□ -0.72
CPSF4-211ENST00000471455 GNAT1P11488 350 aa10.57□□□□□ -0.72
CPSF4-211ENST00000471455 ALADP13716 330 aa10.57□□□□□ -0.72
CPSF4-211ENST00000471455 KCNA5P22460 613 aa10.57□□□□□ -0.72
CPSF4-211ENST00000471455 TRDNQ13061 729 aa10.57□□□□□ -0.72
CPSF4-211ENST00000471455 GPNMBQ14956 572 aa10.57□□□□□ -0.72
CPSF4-211ENST00000471455 TRIM71Q2Q1W2 868 aaKnown RBP10.57□□□□□ -0.72
CPSF4-211ENST00000471455 CELF3Q5SZQ8 465 aaKnown RBP10.57□□□□□ -0.72
CPSF4-211ENST00000471455 MYSM1Q5VVJ2 828 aa10.57□□□□□ -0.72
CPSF4-211ENST00000471455 FAM117BQ6P1L5 589 aa10.57□□□□□ -0.72
CPSF4-211ENST00000471455 CWC27Q6UX04 472 aaKnown RBP10.57□□□□□ -0.72
CPSF4-211ENST00000471455 TMCO2Q7Z6W1 182 aaPredicted RBP10.57□□□□□ -0.72
CPSF4-211ENST00000471455 SERINC5Q86VE9 423 aa10.57□□□□□ -0.72
CPSF4-211ENST00000471455 MYOCDQ8IZQ8 938 aa10.57□□□□□ -0.72
CPSF4-211ENST00000471455 RDH13Q8NBN7 331 aa10.57□□□□□ -0.72
CPSF4-211ENST00000471455 YME1L1Q96TA2 773 aa10.57□□□□□ -0.72
CPSF4-211ENST00000471455 RWDD1Q9H446 243 aaPredicted RBP10.57□□□□□ -0.72
CPSF4-211ENST00000471455 PCDHA1Q9Y5I3 950 aa10.57□□□□□ -0.72
CPSF4-211ENST00000471455 ERICH2A1L162 156 aa10.56□□□□□ -0.72
CPSF4-211ENST00000471455 KLRF2D3W0D1 207 aa10.56□□□□□ -0.72
CPSF4-211ENST00000471455 GCOM1H8Y6P7 765 aaPredicted RBP10.56□□□□□ -0.72
CPSF4-211ENST00000471455 POLR2MP0CAP2 368 aa10.56□□□□□ -0.72
CPSF4-211ENST00000471455 UBA1P22314 1058 aaKnown RBP10.56□□□□□ -0.72
CPSF4-211ENST00000471455 SSTR3P32745 418 aaPredicted RBP10.56□□□□□ -0.72
CPSF4-211ENST00000471455 GCGRP47871 477 aa10.56□□□□□ -0.72
CPSF4-211ENST00000471455 HTRA4P83105 476 aaPredicted RBP10.56□□□□□ -0.72
CPSF4-211ENST00000471455 NEDD9Q14511 834 aa10.56□□□□□ -0.72
CPSF4-211ENST00000471455 PGM5Q15124 567 aa10.56□□□□□ -0.72
CPSF4-211ENST00000471455 CSPP1Q1MSJ5 1256 aa10.56□□□□□ -0.72
CPSF4-211ENST00000471455 STOX1Q6ZVD7 989 aa10.56□□□□□ -0.72
CPSF4-211ENST00000471455 VSIG10LQ86VR7 867 aa10.56□□□□□ -0.72
CPSF4-211ENST00000471455 GJD3Q8N144 294 aa10.56□□□□□ -0.72
CPSF4-211ENST00000471455 APBB2Q92870 758 aa10.56□□□□□ -0.72
CPSF4-211ENST00000471455 ATP6V0A1Q93050 837 aa10.56□□□□□ -0.72
CPSF4-211ENST00000471455 MRPL38Q96DV4 380 aaKnown RBP10.56□□□□□ -0.72
CPSF4-211ENST00000471455 OSBPL3Q9H4L5 887 aa10.56□□□□□ -0.72
CPSF4-211ENST00000471455 ZSWIM5Q9P217 1185 aa10.56□□□□□ -0.72
CPSF4-211ENST00000471455 ZNF215Q9UL58 517 aaPredicted RBP10.56□□□□□ -0.72
CPSF4-211ENST00000471455 COL4A6Q14031 1691 aa10.56□□□□□ -0.72
CPSF4-211ENST00000471455 MUC6Q6W4X9 2439 aa10.56□□□□□ -0.72
CPSF4-211ENST00000471455 MICAL3Q7RTP6 2002 aa10.55□□□□□ -0.72
CPSF4-211ENST00000471455 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.55□□□□□ -0.72
CPSF4-211ENST00000471455 PRR33A8MZF0 331 aa10.55□□□□□ -0.72
CPSF4-211ENST00000471455 PI4K2BG5E9Z4 385 aa10.55□□□□□ -0.72
CPSF4-211ENST00000471455 H3BRB1 525 aa10.55□□□□□ -0.72
CPSF4-211ENST00000471455 NCK2O43639 380 aa10.55□□□□□ -0.72
CPSF4-211ENST00000471455 MBTPS1Q14703 1052 aa10.55□□□□□ -0.72
CPSF4-211ENST00000471455 SART3Q15020 963 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms