RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 TMTC3Q6ZXV5 915 aa13.35□□□□□ -0.27
UBE2D4-204ENST00000440899 SGMS1Q86VZ5 419 aa13.35□□□□□ -0.27
UBE2D4-204ENST00000440899 CCDC82Q8N4S0 544 aa13.35□□□□□ -0.27
UBE2D4-204ENST00000440899 LMBR1Q8WVP7 490 aa13.35□□□□□ -0.27
UBE2D4-204ENST00000440899 SEPT1Q8WYJ6 367 aa13.35□□□□□ -0.27
UBE2D4-204ENST00000440899 LRRC2Q9BYS8 371 aa13.35□□□□□ -0.27
UBE2D4-204ENST00000440899 TELO2Q9Y4R8 837 aa13.35□□□□□ -0.27
UBE2D4-204ENST00000440899 PTPRSQ13332 1948 aa13.35□□□□□ -0.27
UBE2D4-204ENST00000440899 hCG_1642624A0A1W2PR95 340 aa13.34□□□□□ -0.27
UBE2D4-204ENST00000440899 SPDYE3A6NKU9 549 aa13.34□□□□□ -0.27
UBE2D4-204ENST00000440899 ATP9AO75110 1047 aa13.34□□□□□ -0.27
UBE2D4-204ENST00000440899 KCNA2P16389 499 aa13.34□□□□□ -0.27
UBE2D4-204ENST00000440899 ITGB5P18084 799 aa13.34□□□□□ -0.27
UBE2D4-204ENST00000440899 TCF7P36402 384 aaPredicted RBP13.34□□□□□ -0.27
UBE2D4-204ENST00000440899 MTMR1Q13613 665 aa13.34□□□□□ -0.27
UBE2D4-204ENST00000440899 UBE2SQ16763 222 aa13.34□□□□□ -0.27
UBE2D4-204ENST00000440899 FAM26DQ5JW98 314 aa13.34□□□□□ -0.27
UBE2D4-204ENST00000440899 RPAINQ86UA6 219 aa13.34□□□□□ -0.27
UBE2D4-204ENST00000440899 TEX2Q8IWB9 1127 aa13.34□□□□□ -0.27
UBE2D4-204ENST00000440899 FBXO22Q8NEZ5 403 aa13.34□□□□□ -0.27
UBE2D4-204ENST00000440899 SP7Q8TDD2 431 aaPredicted RBP13.34□□□□□ -0.27
UBE2D4-204ENST00000440899 APBB2Q92870 758 aa13.34□□□□□ -0.27
UBE2D4-204ENST00000440899 TOP1MTQ969P6 601 aa13.34□□□□□ -0.27
UBE2D4-204ENST00000440899 EHMT1Q9H9B1 1298 aa13.34□□□□□ -0.27
UBE2D4-204ENST00000440899 UBIAD1Q9Y5Z9 338 aa13.34□□□□□ -0.27
UBE2D4-204ENST00000440899 GSTTP1A0A1W2PQM5 241 aa13.33□□□□□ -0.28
UBE2D4-204ENST00000440899 BMP2KLQ5H9B9 411 aa13.33□□□□□ -0.28
UBE2D4-204ENST00000440899 TAF2Q6P1X5 1199 aa13.33□□□□□ -0.28
UBE2D4-204ENST00000440899 HEATR3Q7Z4Q2 680 aa13.33□□□□□ -0.28
UBE2D4-204ENST00000440899 RSPH3Q86UC2 560 aa13.33□□□□□ -0.28
UBE2D4-204ENST00000440899 MICU3Q86XE3 530 aa13.33□□□□□ -0.28
UBE2D4-204ENST00000440899 RAB11FIP4Q86YS3 637 aa13.33□□□□□ -0.28
UBE2D4-204ENST00000440899 GLG1Q92896 1179 aa13.33□□□□□ -0.28
UBE2D4-204ENST00000440899 SAMD11Q96NU1 681 aa13.33□□□□□ -0.28
UBE2D4-204ENST00000440899 NECAB3Q96P71 396 aaPredicted RBP13.33□□□□□ -0.28
UBE2D4-204ENST00000440899 YME1L1Q96TA2 773 aa13.33□□□□□ -0.28
UBE2D4-204ENST00000440899 OSBPL7Q9BZF2 842 aa13.33□□□□□ -0.28
UBE2D4-204ENST00000440899 SMARCAD1Q9H4L7 1026 aa13.33□□□□□ -0.28
UBE2D4-204ENST00000440899 JADE2Q9NQC1 790 aa13.33□□□□□ -0.28
UBE2D4-204ENST00000440899 ERAP1Q9NZ08 941 aa13.33□□□□□ -0.28
UBE2D4-204ENST00000440899 PCDHA6Q9UN73 950 aa13.33□□□□□ -0.28
UBE2D4-204ENST00000440899 PCDHA8Q9Y5H6 950 aa13.33□□□□□ -0.28
UBE2D4-204ENST00000440899 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.32□□□□□ -0.28
UBE2D4-204ENST00000440899 RBAK-RBAKDNI3L0D1 243 aa13.32□□□□□ -0.28
UBE2D4-204ENST00000440899 UPP2O95045 317 aa13.32□□□□□ -0.28
UBE2D4-204ENST00000440899 PPFIA1Q13136 1202 aa13.32□□□□□ -0.28
UBE2D4-204ENST00000440899 APOA5Q6Q788 366 aa13.32□□□□□ -0.28
UBE2D4-204ENST00000440899 NEK1Q96PY6 1258 aa13.32□□□□□ -0.28
UBE2D4-204ENST00000440899 C17orf80Q9BSJ5 609 aa13.32□□□□□ -0.28
UBE2D4-204ENST00000440899 IFIH1Q9BYX4 1025 aaKnown RBP13.32□□□□□ -0.28
UBE2D4-204ENST00000440899 RBM28Q9NW13 759 aaKnown RBP13.32□□□□□ -0.28
UBE2D4-204ENST00000440899 RRN3P2A6NIE6 340 aa13.31□□□□□ -0.28
UBE2D4-204ENST00000440899 FOSP01100 380 aaPredicted RBP13.31□□□□□ -0.28
UBE2D4-204ENST00000440899 CHRNA1P02708 482 aa13.31□□□□□ -0.28
UBE2D4-204ENST00000440899 EXOSC10Q01780 885 aaKnown RBP13.31□□□□□ -0.28
UBE2D4-204ENST00000440899 GRIK4Q16099 956 aa13.31□□□□□ -0.28
UBE2D4-204ENST00000440899 EPC2Q52LR7 807 aa13.31□□□□□ -0.28
UBE2D4-204ENST00000440899 RUFY4Q6ZNE9 571 aa13.31□□□□□ -0.28
UBE2D4-204ENST00000440899 TNPO1Q92973 898 aaKnown RBP13.31□□□□□ -0.28
UBE2D4-204ENST00000440899 MRPL38Q96DV4 380 aaKnown RBP13.31□□□□□ -0.28
UBE2D4-204ENST00000440899 MXRA8Q9BRK3 442 aa13.31□□□□□ -0.28
UBE2D4-204ENST00000440899 RIC8AQ9NPQ8 531 aa13.31□□□□□ -0.28
UBE2D4-204ENST00000440899 PKD2L1Q9P0L9 805 aa13.31□□□□□ -0.28
UBE2D4-204ENST00000440899 TUBE1Q9UJT0 475 aa13.31□□□□□ -0.28
UBE2D4-204ENST00000440899 BRWD1Q9NSI6 2320 aa13.31□□□□□ -0.28
UBE2D4-204ENST00000440899 TCF20Q9UGU0 1960 aaKnown RBP13.31□□□□□ -0.28
UBE2D4-204ENST00000440899 MBLAC1A4D2B0 266 aaPredicted RBP13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 ZBTB43O43298 467 aa13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 RPLP2P05387 115 aaKnown RBP13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 COL9A1P20849 921 aa13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 MARK3P27448 753 aa13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 NAPAP54920 295 aa13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 PTPROQ16827 1216 aa13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 TSGA10IPQ3SY00 556 aa13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 WWC2Q6AWC2 1192 aa13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 PPP1R18Q6NYC8 613 aa13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 CENPQQ7L2Z9 268 aaPredicted RBP13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 DHX32Q7L7V1 743 aaKnown RBP13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 IL17RAQ96F46 866 aa13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 AZI2Q9H6S1 392 aa13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 UBE2ZQ9H832 354 aaPredicted RBP13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 JPH1Q9HDC5 661 aaPredicted RBP13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 KCNH7Q9NS40 1196 aa13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 SLC9A2Q9UBY0 812 aa13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 V9GY48 417 aaPredicted RBP13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 CNTNAP5Q8WYK1 1306 aa13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 MICAL3Q7RTP6 2002 aa13.3□□□□□ -0.28
UBE2D4-204ENST00000440899 DOCK5Q9H7D0 1870 aa13.29□□□□□ -0.28
UBE2D4-204ENST00000440899 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.29□□□□□ -0.28
UBE2D4-204ENST00000440899 H3BNC9 293 aa13.29□□□□□ -0.28
UBE2D4-204ENST00000440899 hCG_1984214I3L0E3 225 aa13.29□□□□□ -0.28
UBE2D4-204ENST00000440899 GHRP10912 638 aa13.29□□□□□ -0.28
UBE2D4-204ENST00000440899 ADCY7P51828 1080 aa13.29□□□□□ -0.28
UBE2D4-204ENST00000440899 MGAT3Q09327 533 aa13.29□□□□□ -0.28
UBE2D4-204ENST00000440899 FUT2Q10981 343 aa13.29□□□□□ -0.28
UBE2D4-204ENST00000440899 KRT32Q14532 448 aa13.29□□□□□ -0.28
UBE2D4-204ENST00000440899 LPIN1Q14693 890 aa13.29□□□□□ -0.28
UBE2D4-204ENST00000440899 RTN1Q16799 776 aa13.29□□□□□ -0.28
UBE2D4-204ENST00000440899 CEP55Q53EZ4 464 aa13.29□□□□□ -0.28
UBE2D4-204ENST00000440899 MARCH8Q5T0T0 291 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms