RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 RTN1Q16799 776 aa11.07□□□□□ -0.64
NIF3L1-202ENST00000409020 TCTN1Q2MV58 587 aa11.07□□□□□ -0.64
NIF3L1-202ENST00000409020 Q6ZUG5 572 aa11.07□□□□□ -0.64
NIF3L1-202ENST00000409020 SESTD1Q86VW0 696 aa11.07□□□□□ -0.64
NIF3L1-202ENST00000409020 TRIM50Q86XT4 487 aa11.07□□□□□ -0.64
NIF3L1-202ENST00000409020 TIFAQ96CG3 184 aa11.07□□□□□ -0.64
NIF3L1-202ENST00000409020 NOD1Q9Y239 953 aa11.07□□□□□ -0.64
NIF3L1-202ENST00000409020 YBX2Q9Y2T7 364 aaKnown RBP11.07□□□□□ -0.64
NIF3L1-202ENST00000409020 DOCK5Q9H7D0 1870 aa11.07□□□□□ -0.64
NIF3L1-202ENST00000409020 GOLGA8AA7E2F4 631 aa11.06□□□□□ -0.64
NIF3L1-202ENST00000409020 GOLGA8BA8MQT2 603 aa11.06□□□□□ -0.64
NIF3L1-202ENST00000409020 ITGB5P18084 799 aa11.06□□□□□ -0.64
NIF3L1-202ENST00000409020 ICAM3P32942 547 aa11.06□□□□□ -0.64
NIF3L1-202ENST00000409020 PTPN11Q06124 597 aaPredicted RBP11.06□□□□□ -0.64
NIF3L1-202ENST00000409020 PCNX4Q63HM2 1172 aa11.06□□□□□ -0.64
NIF3L1-202ENST00000409020 C7orf31Q8N865 590 aa11.06□□□□□ -0.64
NIF3L1-202ENST00000409020 BRF1Q92994 677 aa11.06□□□□□ -0.64
NIF3L1-202ENST00000409020 MLXIPQ9HAP2 919 aa11.06□□□□□ -0.64
NIF3L1-202ENST00000409020 PKD2L1Q9P0L9 805 aa11.06□□□□□ -0.64
NIF3L1-202ENST00000409020 PCDHB8Q9UN66 801 aa11.06□□□□□ -0.64
NIF3L1-202ENST00000409020 PCDHB13Q9Y5F0 798 aa11.06□□□□□ -0.64
NIF3L1-202ENST00000409020 V9GY48 417 aaPredicted RBP11.06□□□□□ -0.64
NIF3L1-202ENST00000409020 TET1Q8NFU7 2136 aa11.06□□□□□ -0.64
NIF3L1-202ENST00000409020 MYH7BA7E2Y1 1941 aa11.06□□□□□ -0.64
NIF3L1-202ENST00000409020 TANC1Q9C0D5 1861 aa11.06□□□□□ -0.64
NIF3L1-202ENST00000409020 ZBBXA8MT70 800 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 STXBP3O00186 592 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 FIBPO43427 364 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 PPFIA4O75335 1185 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 LGALS2P05162 132 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 TGFB3P10600 412 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 ANAPC15P60006 121 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 KRT32Q14532 448 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 MBTPS1Q14703 1052 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 TRIM71Q2Q1W2 868 aaKnown RBP11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 GNPTABQ3T906 1256 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 KCNV1Q6PIU1 500 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 TRAF7Q6Q0C0 670 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 SYNE3Q6ZMZ3 975 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 TMCO2Q7Z6W1 182 aaPredicted RBP11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 GPATCH11Q8N954 259 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 SLC17A8Q8NDX2 589 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 CYP2W1Q8TAV3 490 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 CUL5Q93034 780 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 GPR20Q99678 358 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 RBM28Q9NW13 759 aaKnown RBP11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 TMEM260Q9NX78 707 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 FAM13BQ9NYF5 915 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 PCDHA6Q9UN73 950 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 PCDHA8Q9Y5H6 950 aa11.05□□□□□ -0.64
NIF3L1-202ENST00000409020 KCNA2P16389 499 aa11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 RPS6KB1P23443 525 aa11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 NAPAP54920 295 aa11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 METTL7BQ6UX53 244 aa11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 OSBPL7Q9BZF2 842 aa11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 NKX2-4Q9H2Z4 354 aa11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 ZNF576Q9H609 170 aa11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 TTC28Q96AY4 2481 aa11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 NOP56O00567 594 aaKnown RBP11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 NBNO60934 754 aa11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 ARHGEF15O94989 841 aa11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 SMIM10L2AP0DMW4 78 aa11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 SMIM10L2BP0DMW5 78 aa11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 CKBP12277 381 aa11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 METAP2P50579 478 aaKnown RBP eCLIP11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 BLOC1S2Q6QNY1 142 aa11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 RPUSD2Q8IZ73 545 aaKnown RBP11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 PHKBQ93100 1093 aa11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 LARP6Q9BRS8 491 aaKnown RBP11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 KATNAL1Q9BW62 490 aa11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 SLC4A7Q9Y6M7 1214 aa11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 GBF1Q92538 1859 aa11.04□□□□□ -0.64
NIF3L1-202ENST00000409020 C5orf42Q9H799 3197 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 SPDYE3A6NKU9 549 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 H3BRB1 525 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 TREHO43280 583 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 STAM2O75886 525 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 FOSL2P15408 326 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 SELPP16109 830 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 BFSP2Q13515 415 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 NEDD9Q14511 834 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 ZNF618Q5T7W0 954 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 LRRC8DQ7L1W4 858 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 SPRED2Q7Z698 418 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 USP38Q8NB14 1042 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 RETREG2Q8NC44 543 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 AFAP1L1Q8TED9 768 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 UIMC1Q96RL1 719 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 FTOQ9C0B1 505 aaKnown RBP eCLIP11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 RNPEPQ9H4A4 650 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 PRDM12Q9H4Q4 367 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 TUT1Q9H6E5 874 aaKnown RBP11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 NCOA5Q9HCD5 579 aaKnown RBP11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 RIC8AQ9NPQ8 531 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 BARHL2Q9NY43 387 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 UBIAD1Q9Y5Z9 338 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 BDP1A6H8Y1 2624 aa11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 TRIP12Q14669 1992 aaPredicted RBP11.03□□□□□ -0.64
NIF3L1-202ENST00000409020 SMCO2A6NFE2 343 aa11.02□□□□□ -0.64
NIF3L1-202ENST00000409020 DTNBO60941 627 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms