RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ZBED6P86452 979 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 DNAJC24Q6P3W2 148 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 TMEM179Q6ZVK1 233 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 PRKAG2Q9UGJ0 569 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 TLK1Q9UKI8 766 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 MAN1B1Q9UKM7 699 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 RFC1P35251 1148 aaPredicted RBP5.89□□□□□ -1.47
VPS13C-204ENST00000395898 TFAMQ00059 246 aaKnown RBP5.89□□□□□ -1.47
VPS13C-204ENST00000395898 DHX38Q92620 1227 aaKnown RBP5.89□□□□□ -1.47
VPS13C-204ENST00000395898 EPB41L5Q9HCM4 733 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 MID2Q9UJV3 735 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 THOC5Q13769 683 aaKnown RBP5.89□□□□□ -1.47
VPS13C-204ENST00000395898 RC3H1Q5TC82 1133 aaKnown RBP5.89□□□□□ -1.47
VPS13C-204ENST00000395898 KLC3Q6P597 504 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 SLC35F6Q8N357 371 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 CCNYQ8ND76 341 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 UBE2TQ9NPD8 197 aaPredicted RBP5.89□□□□□ -1.47
VPS13C-204ENST00000395898 ANGPTL3Q9Y5C1 460 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 MAGI3Q5TCQ9 1506 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 ALS2CLQ60I27 953 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 SCINQ9Y6U3 715 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 TMEM94Q12767 1356 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 PLA2G4BP0C869 781 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 JAK3P52333 1124 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 ANKRD20A4Q4UJ75 823 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 ANKRD20A8PQ5CZ79 823 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 ANKRD20A2Q5SQ80 823 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 ANKRD20A1Q5TYW2 823 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 RNF139Q8WU17 664 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 GCNAQ96QF7 691 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 RRAGDQ9NQL2 400 aaPredicted RBP5.89□□□□□ -1.47
VPS13C-204ENST00000395898 SYNGAP1Q96PV0 1343 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 BAG2O95816 211 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 CLTAP09496 248 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 ERFEQ4G0M1 354 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 TCP11X2Q5H9J9 407 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 USP17L2Q6R6M4 530 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 ZNF579Q8NAF0 562 aaKnown RBP5.89□□□□□ -1.47
VPS13C-204ENST00000395898 CCDC197Q8NCU1 140 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 CFAP61Q8NHU2 1237 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 STAG1Q8WVM7 1258 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 PTCH1Q13635 1447 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 NDUFA10O95299 355 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 DPCR1Q3MIW9 517 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 KRT39Q6A163 491 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 DGKHQ86XP1 1220 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 NDUFAF2Q8N183 169 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 EEF2KMTQ96G04 330 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 SERPINI1Q99574 410 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 SMYD2Q9NRG4 433 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 HOXC10Q9NYD6 342 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 PRPSAP2O60256 369 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 RXRBP28702 533 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 GRAPQ13588 217 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 CNPY4Q8N129 248 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 GRAPLQ8TC17 118 aaPredicted RBP5.89□□□□□ -1.47
VPS13C-204ENST00000395898 PPWD1Q96BP3 646 aaKnown RBP5.89□□□□□ -1.47
VPS13C-204ENST00000395898 ACTN1P12814 892 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 MECOMQ03112 1051 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 C6orf118Q5T5N4 469 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 SCYL3Q8IZE3 742 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 C7orf31Q8N865 590 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 PLEKHA4Q9H4M7 779 aa5.89□□□□□ -1.47
VPS13C-204ENST00000395898 CPSF1Q10570 1443 aaKnown RBP5.88□□□□□ -1.47
VPS13C-204ENST00000395898 IQANK1A0A1B0GTG1 560 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 PLCG1P19174 1290 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 ATG16L1Q676U5 607 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 CAPN12Q6ZSI9 719 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 MICAL1Q8TDZ2 1067 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 FAM149B1Q96BN6 582 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 NRBF2Q96F24 287 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 CALN1Q9BXU9 219 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 RABEP2Q9H5N1 569 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 WDR19Q8NEZ3 1342 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 STK36Q9NRP7 1315 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 CLRN2A0PK11 232 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 ANXA13P27216 316 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 MAP2K2P36507 400 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 MXI1P50539 228 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 RCAN1P53805 252 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 GLE1Q53GS7 698 aaKnown RBP5.88□□□□□ -1.47
VPS13C-204ENST00000395898 DARS2Q6PI48 645 aaKnown RBP5.88□□□□□ -1.47
VPS13C-204ENST00000395898 CENPUQ71F23 418 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 ZNF589Q86UQ0 364 aaPredicted RBP5.88□□□□□ -1.47
VPS13C-204ENST00000395898 PUS7LQ9H0K6 701 aaKnown RBP5.88□□□□□ -1.47
VPS13C-204ENST00000395898 ADCY2Q08462 1091 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 NECTIN1Q15223 517 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 PDCD2Q16342 344 aaPredicted RBP5.88□□□□□ -1.47
VPS13C-204ENST00000395898 FAM133AQ8N9E0 248 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 MCPH1Q8NEM0 835 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 ATP6V1E2Q96A05 226 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 LMCD1Q9NZU5 365 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 SETSIPP0DME0 302 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 PKP1Q13835 747 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 NDST4Q9H3R1 872 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 ZBTB1Q9Y2K1 713 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 ATP8A1Q9Y2Q0 1164 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 CCDC188H7C350 402 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 CCNE1P24864 410 aa5.88□□□□□ -1.47
VPS13C-204ENST00000395898 DDIT3P35638 169 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms