RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 LCHNA4D1U4 455 aa13.3□□□□□ -0.28
HLA-DQA1-203ENST00000395363 SMCO2A6NFE2 343 aa13.3□□□□□ -0.28
HLA-DQA1-203ENST00000395363 EPOPA6NHQ4 379 aa13.3□□□□□ -0.28
HLA-DQA1-203ENST00000395363 DDX39AO00148 427 aaKnown RBP13.3□□□□□ -0.28
HLA-DQA1-203ENST00000395363 PPFIA4O75335 1185 aa13.3□□□□□ -0.28
HLA-DQA1-203ENST00000395363 TGFB3P10600 412 aa13.3□□□□□ -0.28
HLA-DQA1-203ENST00000395363 SELPP16109 830 aa13.3□□□□□ -0.28
HLA-DQA1-203ENST00000395363 TCF7P36402 384 aaPredicted RBP13.3□□□□□ -0.28
HLA-DQA1-203ENST00000395363 THPOP40225 353 aa13.3□□□□□ -0.28
HLA-DQA1-203ENST00000395363 STK3Q13188 491 aa13.3□□□□□ -0.28
HLA-DQA1-203ENST00000395363 BFSP2Q13515 415 aa13.3□□□□□ -0.28
HLA-DQA1-203ENST00000395363 FAM117BQ6P1L5 589 aa13.3□□□□□ -0.28
HLA-DQA1-203ENST00000395363 RUFY4Q6ZNE9 571 aa13.3□□□□□ -0.28
HLA-DQA1-203ENST00000395363 RPUSD2Q8IZ73 545 aaKnown RBP13.3□□□□□ -0.28
HLA-DQA1-203ENST00000395363 ATP6V0A1Q93050 837 aa13.3□□□□□ -0.28
HLA-DQA1-203ENST00000395363 KATNAL1Q9BW62 490 aa13.3□□□□□ -0.28
HLA-DQA1-203ENST00000395363 RIC8AQ9NPQ8 531 aa13.3□□□□□ -0.28
HLA-DQA1-203ENST00000395363 BARHL2Q9NY43 387 aa13.3□□□□□ -0.28
HLA-DQA1-203ENST00000395363 C17orf102A2RUQ5 167 aa13.29□□□□□ -0.28
HLA-DQA1-203ENST00000395363 CA3P07451 260 aa13.29□□□□□ -0.28
HLA-DQA1-203ENST00000395363 SCG2P13521 617 aa13.29□□□□□ -0.28
HLA-DQA1-203ENST00000395363 ARHGAP4P98171 946 aa13.29□□□□□ -0.28
HLA-DQA1-203ENST00000395363 PTK7Q13308 1070 aa13.29□□□□□ -0.28
HLA-DQA1-203ENST00000395363 ITGB3BPQ13352 177 aaPredicted RBP13.29□□□□□ -0.28
HLA-DQA1-203ENST00000395363 MTMR1Q13613 665 aa13.29□□□□□ -0.28
HLA-DQA1-203ENST00000395363 NEDD9Q14511 834 aa13.29□□□□□ -0.28
HLA-DQA1-203ENST00000395363 CCDC85BQ15834 202 aaPredicted RBP13.29□□□□□ -0.28
HLA-DQA1-203ENST00000395363 NTRK3Q16288 839 aa13.29□□□□□ -0.28
HLA-DQA1-203ENST00000395363 KRT40Q6A162 431 aa13.29□□□□□ -0.28
HLA-DQA1-203ENST00000395363 CAGE1Q8TC20 777 aa13.29□□□□□ -0.28
HLA-DQA1-203ENST00000395363 AFAP1L1Q8TED9 768 aa13.29□□□□□ -0.28
HLA-DQA1-203ENST00000395363 LMBR1Q8WVP7 490 aa13.29□□□□□ -0.28
HLA-DQA1-203ENST00000395363 GPRASP2Q96D09 838 aa13.29□□□□□ -0.28
HLA-DQA1-203ENST00000395363 PCYT2Q99447 389 aa13.29□□□□□ -0.28
HLA-DQA1-203ENST00000395363 SLC26A6Q9BXS9 759 aa13.29□□□□□ -0.28
HLA-DQA1-203ENST00000395363 USP26Q9BXU7 913 aa13.29□□□□□ -0.28
HLA-DQA1-203ENST00000395363 VPS54Q9P1Q0 977 aa13.29□□□□□ -0.28
HLA-DQA1-203ENST00000395363 NID2Q14112 1375 aa13.29□□□□□ -0.28
HLA-DQA1-203ENST00000395363 STAM2O75886 525 aa13.28□□□□□ -0.28
HLA-DQA1-203ENST00000395363 REC8O95072 547 aa13.28□□□□□ -0.28
HLA-DQA1-203ENST00000395363 HMGB1P09429 215 aaKnown RBP13.28□□□□□ -0.28
HLA-DQA1-203ENST00000395363 CLK2P49760 499 aaKnown RBP13.28□□□□□ -0.28
HLA-DQA1-203ENST00000395363 WDR5P61964 334 aaKnown RBP13.28□□□□□ -0.28
HLA-DQA1-203ENST00000395363 IGBP1P78318 339 aa13.28□□□□□ -0.28
HLA-DQA1-203ENST00000395363 PFKFB3Q16875 520 aaPredicted RBP13.28□□□□□ -0.28
HLA-DQA1-203ENST00000395363 PPP2R2DQ66LE6 453 aa13.28□□□□□ -0.28
HLA-DQA1-203ENST00000395363 NLRX1Q86UT6 975 aa13.28□□□□□ -0.28
HLA-DQA1-203ENST00000395363 SERINC5Q86VE9 423 aa13.28□□□□□ -0.28
HLA-DQA1-203ENST00000395363 CCDC155Q8N6L0 562 aa13.28□□□□□ -0.28
HLA-DQA1-203ENST00000395363 TRAPPC12Q8WVT3 735 aa13.28□□□□□ -0.28
HLA-DQA1-203ENST00000395363 AIFM3Q96NN9 605 aa13.28□□□□□ -0.28
HLA-DQA1-203ENST00000395363 AGXT2Q9BYV1 514 aa13.28□□□□□ -0.28
HLA-DQA1-203ENST00000395363 MTIF3Q9H2K0 278 aaKnown RBP13.28□□□□□ -0.28
HLA-DQA1-203ENST00000395363 JADE2Q9NQC1 790 aa13.28□□□□□ -0.28
HLA-DQA1-203ENST00000395363 KCNH7Q9NS40 1196 aa13.28□□□□□ -0.28
HLA-DQA1-203ENST00000395363 PPP4R2Q9NY27 417 aa13.28□□□□□ -0.28
HLA-DQA1-203ENST00000395363 MSRAQ9UJ68 235 aa13.28□□□□□ -0.28
HLA-DQA1-203ENST00000395363 FAM86B1E9PN63 330 aa13.27□□□□□ -0.29
HLA-DQA1-203ENST00000395363 FAM86B2P0C5J1 330 aa13.27□□□□□ -0.29
HLA-DQA1-203ENST00000395363 PDIA3P30101 505 aaKnown RBP13.27□□□□□ -0.29
HLA-DQA1-203ENST00000395363 HOXC8P31273 242 aa13.27□□□□□ -0.29
HLA-DQA1-203ENST00000395363 RBL2Q08999 1139 aa13.27□□□□□ -0.29
HLA-DQA1-203ENST00000395363 RAB30Q15771 203 aa13.27□□□□□ -0.29
HLA-DQA1-203ENST00000395363 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.27□□□□□ -0.29
HLA-DQA1-203ENST00000395363 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.27□□□□□ -0.29
HLA-DQA1-203ENST00000395363 MICALL1Q8N3F8 863 aa13.27□□□□□ -0.29
HLA-DQA1-203ENST00000395363 GJA10Q969M2 543 aa13.27□□□□□ -0.29
HLA-DQA1-203ENST00000395363 MXRA8Q9BRK3 442 aa13.27□□□□□ -0.29
HLA-DQA1-203ENST00000395363 RALGAPA2Q2PPJ7 1873 aa13.27□□□□□ -0.29
HLA-DQA1-203ENST00000395363 TTC3P53804 2025 aa13.27□□□□□ -0.29
HLA-DQA1-203ENST00000395363 TMEM265A0A087WTH1 108 aa13.26□□□□□ -0.29
HLA-DQA1-203ENST00000395363 CCNE2O96020 404 aa13.26□□□□□ -0.29
HLA-DQA1-203ENST00000395363 ACTN1P12814 892 aa13.26□□□□□ -0.29
HLA-DQA1-203ENST00000395363 IGFBP4P22692 258 aa13.26□□□□□ -0.29
HLA-DQA1-203ENST00000395363 RFC2P35250 354 aa13.26□□□□□ -0.29
HLA-DQA1-203ENST00000395363 SREBF1P36956 1147 aa13.26□□□□□ -0.29
HLA-DQA1-203ENST00000395363 COL4A6Q14031 1691 aa13.26□□□□□ -0.29
HLA-DQA1-203ENST00000395363 PPP1R18Q6NYC8 613 aa13.26□□□□□ -0.29
HLA-DQA1-203ENST00000395363 XRRA1Q6P2D8 792 aa13.26□□□□□ -0.29
HLA-DQA1-203ENST00000395363 RUFY3Q7L099 469 aa13.26□□□□□ -0.29
HLA-DQA1-203ENST00000395363 HERC6Q8IVU3 1022 aa13.26□□□□□ -0.29
HLA-DQA1-203ENST00000395363 DBF4BQ8NFT6 615 aa13.26□□□□□ -0.29
HLA-DQA1-203ENST00000395363 SENP7Q9BQF6 1050 aa13.26□□□□□ -0.29
HLA-DQA1-203ENST00000395363 SLC28A3Q9HAS3 691 aa13.26□□□□□ -0.29
HLA-DQA1-203ENST00000395363 ZSWIM6Q9HCJ5 1215 aa13.26□□□□□ -0.29
HLA-DQA1-203ENST00000395363 MTUS1Q9ULD2 1270 aa13.26□□□□□ -0.29
HLA-DQA1-203ENST00000395363 BDP1A6H8Y1 2624 aa13.26□□□□□ -0.29
HLA-DQA1-203ENST00000395363 FNDC1Q4ZHG4 1894 aaPredicted RBP13.25□□□□□ -0.29
HLA-DQA1-203ENST00000395363 ARID2Q68CP9 1835 aa13.25□□□□□ -0.29
HLA-DQA1-203ENST00000395363 RSPH10B2B2RC85 870 aa13.25□□□□□ -0.29
HLA-DQA1-203ENST00000395363 DLL1O00548 723 aa13.25□□□□□ -0.29
HLA-DQA1-203ENST00000395363 PRPF3O43395 683 aaKnown RBP13.25□□□□□ -0.29
HLA-DQA1-203ENST00000395363 EDIL3O43854 480 aa13.25□□□□□ -0.29
HLA-DQA1-203ENST00000395363 CXCL10P02778 98 aa13.25□□□□□ -0.29
HLA-DQA1-203ENST00000395363 PFKMP08237 780 aa13.25□□□□□ -0.29
HLA-DQA1-203ENST00000395363 RSPH10BP0C881 870 aa13.25□□□□□ -0.29
HLA-DQA1-203ENST00000395363 ACTR2P61160 394 aa13.25□□□□□ -0.29
HLA-DQA1-203ENST00000395363 ADAM17P78536 824 aa13.25□□□□□ -0.29
HLA-DQA1-203ENST00000395363 TMEM62Q0P6H9 643 aa13.25□□□□□ -0.29
HLA-DQA1-203ENST00000395363 GRIK4Q16099 956 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms