RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 Q6ZUG5 572 aa4.26□□□□□ -1.73
RNU6-1040P-201ENST00000383974 OTOP3Q7RTS5 596 aa4.26□□□□□ -1.73
RNU6-1040P-201ENST00000383974 GPR155Q7Z3F1 870 aa4.26□□□□□ -1.73
RNU6-1040P-201ENST00000383974 CELF2-AS1Q8N7Q2 184 aa4.26□□□□□ -1.73
RNU6-1040P-201ENST00000383974 UHMK1Q8TAS1 419 aaKnown RBP4.26□□□□□ -1.73
RNU6-1040P-201ENST00000383974 Q8TCH9 128 aa4.26□□□□□ -1.73
RNU6-1040P-201ENST00000383974 HNRNPLLQ8WVV9 542 aaKnown RBP4.26□□□□□ -1.73
RNU6-1040P-201ENST00000383974 GNRHR2Q96P88 292 aa4.26□□□□□ -1.73
RNU6-1040P-201ENST00000383974 TELO2Q9Y4R8 837 aa4.26□□□□□ -1.73
RNU6-1040P-201ENST00000383974 CYR61O00622 381 aa4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 NKRFO15226 690 aaKnown RBP eCLIP4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 FZD7O75084 574 aa4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 FBXO21O94952 628 aa4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 AMHP03971 560 aa4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 CHGBP05060 677 aa4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 CKMP06732 381 aa4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 GNAT1P11488 350 aa4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 COL6A2P12110 1019 aa4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 FAHP16930 419 aa4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 CSF2RBP32927 897 aa4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 GNL2Q13823 731 aaKnown RBP4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 KCNT2Q6UVM3 1135 aa4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 RSPO2Q6UXX9 243 aaPredicted RBP4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 LBX2Q6XYB7 198 aa4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 MCF2L2Q86YR7 1114 aa4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 STPG3Q8N7X2 389 aa4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 KCNJ15Q99712 375 aa4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 MRIQ9BWK5 157 aa4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 ST7Q9NRC1 585 aa4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 KCND1Q9NSA2 647 aa4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 ARHGAP20Q9P2F6 1191 aa4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 SLC4A7Q9Y6M7 1214 aa4.25□□□□□ -1.73
RNU6-1040P-201ENST00000383974 PFKPQ01813 784 aa4.24□□□□□ -1.73
RNU6-1040P-201ENST00000383974 SPIRE1Q08AE8 756 aa4.24□□□□□ -1.73
RNU6-1040P-201ENST00000383974 HSP90AA2PQ14568 343 aaPredicted RBP4.24□□□□□ -1.73
RNU6-1040P-201ENST00000383974 NTRK3Q16288 839 aa4.24□□□□□ -1.73
RNU6-1040P-201ENST00000383974 DDR2Q16832 855 aa4.24□□□□□ -1.73
RNU6-1040P-201ENST00000383974 KIZQ2M2Z5 673 aa4.24□□□□□ -1.73
RNU6-1040P-201ENST00000383974 HABP4Q5JVS0 413 aaKnown RBP4.24□□□□□ -1.73
RNU6-1040P-201ENST00000383974 TCTN3Q6NUS6 607 aa4.24□□□□□ -1.73
RNU6-1040P-201ENST00000383974 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.24□□□□□ -1.73
RNU6-1040P-201ENST00000383974 DCAF4Q8WV16 495 aa4.24□□□□□ -1.73
RNU6-1040P-201ENST00000383974 AJUBAQ96IF1 538 aa4.24□□□□□ -1.73
RNU6-1040P-201ENST00000383974 LRRC37BQ96QE4 947 aa4.24□□□□□ -1.73
RNU6-1040P-201ENST00000383974 LMF1Q96S06 567 aa4.24□□□□□ -1.73
RNU6-1040P-201ENST00000383974 TINF2Q9BSI4 451 aa4.24□□□□□ -1.73
RNU6-1040P-201ENST00000383974 AARSD1Q9BTE6 412 aaKnown RBP4.24□□□□□ -1.73
RNU6-1040P-201ENST00000383974 SEMA4AQ9H3S1 761 aa4.24□□□□□ -1.73
RNU6-1040P-201ENST00000383974 SEC61A2Q9H9S3 476 aa4.24□□□□□ -1.73
RNU6-1040P-201ENST00000383974 ARHGEF4Q9NR80 690 aa4.24□□□□□ -1.73
RNU6-1040P-201ENST00000383974 DSEQ9UL01 958 aa4.24□□□□□ -1.73
RNU6-1040P-201ENST00000383974 BLACEA4D250 179 aa4.23□□□□□ -1.73
RNU6-1040P-201ENST00000383974 ZNF839A8K0R7 811 aa4.23□□□□□ -1.73
RNU6-1040P-201ENST00000383974 FOXS1O43638 330 aa4.23□□□□□ -1.73
RNU6-1040P-201ENST00000383974 IL18BPO95998 194 aa4.23□□□□□ -1.73
RNU6-1040P-201ENST00000383974 ZNF888P0CJ79 500 aaPredicted RBP4.23□□□□□ -1.73
RNU6-1040P-201ENST00000383974 USP51Q70EK9 711 aa4.23□□□□□ -1.73
RNU6-1040P-201ENST00000383974 KCTD1Q719H9 257 aa4.23□□□□□ -1.73
RNU6-1040P-201ENST00000383974 REXO1L1PQ8IX06 675 aa4.23□□□□□ -1.73
RNU6-1040P-201ENST00000383974 IFNL2Q8IZJ0 200 aa4.23□□□□□ -1.73
RNU6-1040P-201ENST00000383974 OSBP2Q969R2 916 aa4.23□□□□□ -1.73
RNU6-1040P-201ENST00000383974 SGSM3Q96HU1 749 aa4.23□□□□□ -1.73
RNU6-1040P-201ENST00000383974 TACO1Q9BSH4 297 aaKnown RBP4.23□□□□□ -1.73
RNU6-1040P-201ENST00000383974 PDGFDQ9GZP0 370 aaPredicted RBP4.23□□□□□ -1.73
RNU6-1040P-201ENST00000383974 KATNBL1Q9H079 304 aa4.23□□□□□ -1.73
RNU6-1040P-201ENST00000383974 PCED1AQ9H1Q7 454 aa4.23□□□□□ -1.73
RNU6-1040P-201ENST00000383974 PTPN22Q9Y2R2 807 aa4.23□□□□□ -1.73
RNU6-1040P-201ENST00000383974 R3HCC1Q9Y3T6 440 aaKnown RBP4.23□□□□□ -1.73
RNU6-1040P-201ENST00000383974 TESMINQ9Y4I5 508 aa4.23□□□□□ -1.73
RNU6-1040P-201ENST00000383974 H0Y858 1186 aa4.22□□□□□ -1.73
RNU6-1040P-201ENST00000383974 ACOT7O00154 380 aa4.22□□□□□ -1.73
RNU6-1040P-201ENST00000383974 PRODHO43272 600 aa4.22□□□□□ -1.73
RNU6-1040P-201ENST00000383974 SOD2P04179 222 aa4.22□□□□□ -1.73
RNU6-1040P-201ENST00000383974 ENO2P09104 434 aaPredicted RBP4.22□□□□□ -1.73
RNU6-1040P-201ENST00000383974 FGFR1P11362 822 aa4.22□□□□□ -1.73
RNU6-1040P-201ENST00000383974 PABPC1P11940 636 aaKnown RBP4.22□□□□□ -1.73
RNU6-1040P-201ENST00000383974 EPHA5P54756 1037 aa4.22□□□□□ -1.73
RNU6-1040P-201ENST00000383974 ARID5AQ03989 594 aa4.22□□□□□ -1.73
RNU6-1040P-201ENST00000383974 KLF10Q13118 480 aa4.22□□□□□ -1.73
RNU6-1040P-201ENST00000383974 STYK1Q6J9G0 422 aa4.22□□□□□ -1.73
RNU6-1040P-201ENST00000383974 ANKS3Q6ZW76 656 aa4.22□□□□□ -1.73
RNU6-1040P-201ENST00000383974 GIMAP8Q8ND71 665 aaPredicted RBP4.22□□□□□ -1.73
RNU6-1040P-201ENST00000383974 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.22□□□□□ -1.73
RNU6-1040P-201ENST00000383974 ZFYVE21Q9BQ24 234 aa4.22□□□□□ -1.73
RNU6-1040P-201ENST00000383974 MENTQ9BUN1 341 aa4.22□□□□□ -1.73
RNU6-1040P-201ENST00000383974 CD244Q9BZW8 370 aa4.22□□□□□ -1.73
RNU6-1040P-201ENST00000383974 NUB1Q9Y5A7 615 aa4.22□□□□□ -1.73
RNU6-1040P-201ENST00000383974 HS3ST3A1Q9Y663 406 aa4.22□□□□□ -1.73
RNU6-1040P-201ENST00000383974 IQCA1LA6NCM1 817 aa4.21□□□□□ -1.74
RNU6-1040P-201ENST00000383974 OVOL3O00110 214 aa4.21□□□□□ -1.74
RNU6-1040P-201ENST00000383974 TCF3P15923 654 aa4.21□□□□□ -1.74
RNU6-1040P-201ENST00000383974 DNAJA1P31689 397 aaKnown RBP4.21□□□□□ -1.74
RNU6-1040P-201ENST00000383974 GPR85P60893 370 aa4.21□□□□□ -1.74
RNU6-1040P-201ENST00000383974 USP10Q14694 798 aaKnown RBP4.21□□□□□ -1.74
RNU6-1040P-201ENST00000383974 HS1BP3Q53T59 392 aa4.21□□□□□ -1.74
RNU6-1040P-201ENST00000383974 YOD1Q5VVQ6 348 aaPredicted RBP4.21□□□□□ -1.74
RNU6-1040P-201ENST00000383974 NSMFQ6X4W1 530 aa4.21□□□□□ -1.74
RNU6-1040P-201ENST00000383974 IFNL3Q8IZI9 196 aa4.21□□□□□ -1.74
RNU6-1040P-201ENST00000383974 SH3RF2Q8TEC5 729 aa4.21□□□□□ -1.74
RNU6-1040P-201ENST00000383974 NEIL1Q96FI4 390 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms