RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 PABPC5Q96DU9 382 aaKnown RBP14.01□□□□□ -0.17
LSM2-208ENST00000375661 YME1L1Q96TA2 773 aa14.01□□□□□ -0.17
LSM2-208ENST00000375661 KIF2CQ99661 725 aa14.01□□□□□ -0.17
LSM2-208ENST00000375661 UPF3BQ9BZI7 483 aaKnown RBP14.01□□□□□ -0.17
LSM2-208ENST00000375661 TUT1Q9H6E5 874 aaKnown RBP14.01□□□□□ -0.17
LSM2-208ENST00000375661 MLXIPQ9HAP2 919 aa14.01□□□□□ -0.17
LSM2-208ENST00000375661 VAT1LQ9HCJ6 419 aa14.01□□□□□ -0.17
LSM2-208ENST00000375661 DOCK5Q9H7D0 1870 aa14.01□□□□□ -0.17
LSM2-208ENST00000375661 ZBTB5O15062 677 aa14□□□□□ -0.17
LSM2-208ENST00000375661 MYCLP12524 364 aaPredicted RBP14□□□□□ -0.17
LSM2-208ENST00000375661 UBA1P22314 1058 aaKnown RBP14□□□□□ -0.17
LSM2-208ENST00000375661 GPM6BQ13491 265 aa14□□□□□ -0.17
LSM2-208ENST00000375661 CSPP1Q1MSJ5 1256 aa14□□□□□ -0.17
LSM2-208ENST00000375661 Q6ZUG5 572 aa14□□□□□ -0.17
LSM2-208ENST00000375661 TMEM192Q8IY95 271 aa14□□□□□ -0.17
LSM2-208ENST00000375661 FBXL16Q8N461 479 aa14□□□□□ -0.17
LSM2-208ENST00000375661 AGXT2Q9BYV1 514 aa14□□□□□ -0.17
LSM2-208ENST00000375661 POTEB3A0JP26 581 aa13.99□□□□□ -0.17
LSM2-208ENST00000375661 KLRF2D3W0D1 207 aa13.99□□□□□ -0.17
LSM2-208ENST00000375661 DCXO43602 365 aa13.99□□□□□ -0.17
LSM2-208ENST00000375661 STAM2O75886 525 aa13.99□□□□□ -0.17
LSM2-208ENST00000375661 SMIM10L2AP0DMW4 78 aa13.99□□□□□ -0.17
LSM2-208ENST00000375661 SMIM10L2BP0DMW5 78 aa13.99□□□□□ -0.17
LSM2-208ENST00000375661 CCND2P30279 289 aa13.99□□□□□ -0.17
LSM2-208ENST00000375661 SP2Q02086 613 aa13.99□□□□□ -0.17
LSM2-208ENST00000375661 TROAPQ12815 778 aa13.99□□□□□ -0.17
LSM2-208ENST00000375661 GNPTABQ3T906 1256 aa13.99□□□□□ -0.17
LSM2-208ENST00000375661 POTEBQ6S5H4 581 aa13.99□□□□□ -0.17
LSM2-208ENST00000375661 SGMS1Q86VZ5 419 aa13.99□□□□□ -0.17
LSM2-208ENST00000375661 ZNF654Q8IZM8 581 aa13.99□□□□□ -0.17
LSM2-208ENST00000375661 NSUN3Q9H649 340 aaKnown RBP13.99□□□□□ -0.17
LSM2-208ENST00000375661 BRPF3Q9ULD4 1205 aa13.99□□□□□ -0.17
LSM2-208ENST00000375661 PCDHA1Q9Y5I3 950 aa13.99□□□□□ -0.17
LSM2-208ENST00000375661 CYP46A1Q9Y6A2 500 aa13.99□□□□□ -0.17
LSM2-208ENST00000375661 MUC6Q6W4X9 2439 aa13.99□□□□□ -0.17
LSM2-208ENST00000375661 C5orf67F2Z3F1 127 aa13.98□□□□□ -0.17
LSM2-208ENST00000375661 TREHO43280 583 aa13.98□□□□□ -0.17
LSM2-208ENST00000375661 LGALS2P05162 132 aa13.98□□□□□ -0.17
LSM2-208ENST00000375661 RB1P06400 928 aa13.98□□□□□ -0.17
LSM2-208ENST00000375661 ICAM3P32942 547 aa13.98□□□□□ -0.17
LSM2-208ENST00000375661 TOB2Q14106 344 aaPredicted RBP13.98□□□□□ -0.17
LSM2-208ENST00000375661 FAM26DQ5JW98 314 aa13.98□□□□□ -0.17
LSM2-208ENST00000375661 TMTC2Q8N394 836 aa13.98□□□□□ -0.17
LSM2-208ENST00000375661 STAG2Q8N3U4 1231 aa13.98□□□□□ -0.17
LSM2-208ENST00000375661 TBC1D32Q96NH3 1257 aa13.98□□□□□ -0.17
LSM2-208ENST00000375661 MYL10Q9BUA6 226 aa13.98□□□□□ -0.17
LSM2-208ENST00000375661 LMAN2LQ9H0V9 348 aa13.98□□□□□ -0.17
LSM2-208ENST00000375661 RNPEPQ9H4A4 650 aa13.98□□□□□ -0.17
LSM2-208ENST00000375661 RWDD3Q9Y3V2 267 aa13.98□□□□□ -0.17
LSM2-208ENST00000375661 FRMPD4Q14CM0 1322 aa13.97□□□□□ -0.17
LSM2-208ENST00000375661 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.97□□□□□ -0.17
LSM2-208ENST00000375661 PALM3A6NDB9 673 aaPredicted RBP13.97□□□□□ -0.17
LSM2-208ENST00000375661 CCDC69A6NI79 296 aa13.97□□□□□ -0.17
LSM2-208ENST00000375661 C19orf67A6NJJ6 358 aa13.97□□□□□ -0.17
LSM2-208ENST00000375661 H3BQ06 376 aaPredicted RBP13.97□□□□□ -0.17
LSM2-208ENST00000375661 GCOM1H8Y6P7 765 aaPredicted RBP13.97□□□□□ -0.17
LSM2-208ENST00000375661 NOP56O00567 594 aaKnown RBP13.97□□□□□ -0.17
LSM2-208ENST00000375661 PPP1R11O60927 126 aaPredicted RBP13.97□□□□□ -0.17
LSM2-208ENST00000375661 POLR2MP0CAP2 368 aa13.97□□□□□ -0.17
LSM2-208ENST00000375661 ZP2Q05996 745 aa13.97□□□□□ -0.17
LSM2-208ENST00000375661 NEDD9Q14511 834 aa13.97□□□□□ -0.17
LSM2-208ENST00000375661 GRM4Q14833 912 aa13.97□□□□□ -0.17
LSM2-208ENST00000375661 TCEAL5Q5H9L2 206 aa13.97□□□□□ -0.17
LSM2-208ENST00000375661 NFXL1Q6ZNB6 911 aa13.97□□□□□ -0.17
LSM2-208ENST00000375661 CATIPQ7Z7H3 387 aa13.97□□□□□ -0.17
LSM2-208ENST00000375661 IL31RAQ8NI17 732 aa13.97□□□□□ -0.17
LSM2-208ENST00000375661 BRF1Q92994 677 aa13.97□□□□□ -0.17
LSM2-208ENST00000375661 UPF2Q9HAU5 1272 aaKnown RBP13.97□□□□□ -0.17
LSM2-208ENST00000375661 PDRG1Q9NUG6 133 aa13.97□□□□□ -0.17
LSM2-208ENST00000375661 MAD2L2Q9UI95 211 aa13.97□□□□□ -0.17
LSM2-208ENST00000375661 ZNF215Q9UL58 517 aaPredicted RBP13.97□□□□□ -0.17
LSM2-208ENST00000375661 DDAH1O94760 285 aa13.96□□□□□ -0.17
LSM2-208ENST00000375661 HOXA13P31271 388 aaPredicted RBP13.96□□□□□ -0.17
LSM2-208ENST00000375661 FGD1P98174 961 aa13.96□□□□□ -0.17
LSM2-208ENST00000375661 APOBRQ0VD83 1088 aa13.96□□□□□ -0.17
LSM2-208ENST00000375661 METTL7BQ6UX53 244 aa13.96□□□□□ -0.17
LSM2-208ENST00000375661 ALYREFQ86V81 257 aaKnown RBP13.96□□□□□ -0.17
LSM2-208ENST00000375661 RAB11FIP4Q86YS3 637 aa13.96□□□□□ -0.17
LSM2-208ENST00000375661 ADHFE1Q8IWW8 467 aa13.96□□□□□ -0.17
LSM2-208ENST00000375661 FIBCD1Q8N539 461 aa13.96□□□□□ -0.17
LSM2-208ENST00000375661 IFIH1Q9BYX4 1025 aaKnown RBP13.96□□□□□ -0.17
LSM2-208ENST00000375661 RIOX1Q9H6W3 641 aa13.96□□□□□ -0.17
LSM2-208ENST00000375661 SLC12A7Q9Y666 1083 aa13.96□□□□□ -0.17
LSM2-208ENST00000375661 BAZ2BQ9UIF8 2168 aaKnown RBP13.96□□□□□ -0.18
LSM2-208ENST00000375661 TTC3P53804 2025 aa13.95□□□□□ -0.18
LSM2-208ENST00000375661 KLF18A0A0U1RQI7 1052 aa13.95□□□□□ -0.18
LSM2-208ENST00000375661 FIBPO43427 364 aa13.95□□□□□ -0.18
LSM2-208ENST00000375661 SORBS3O60504 671 aa13.95□□□□□ -0.18
LSM2-208ENST00000375661 UPP2O95045 317 aa13.95□□□□□ -0.18
LSM2-208ENST00000375661 RXRAP19793 462 aa13.95□□□□□ -0.18
LSM2-208ENST00000375661 NEK4P51957 841 aa13.95□□□□□ -0.18
LSM2-208ENST00000375661 EVCP57679 992 aa13.95□□□□□ -0.18
LSM2-208ENST00000375661 ADAM17P78536 824 aa13.95□□□□□ -0.18
LSM2-208ENST00000375661 SLC35G1Q2M3R5 365 aa13.95□□□□□ -0.18
LSM2-208ENST00000375661 APOA5Q6Q788 366 aa13.95□□□□□ -0.18
LSM2-208ENST00000375661 RPAINQ86UA6 219 aa13.95□□□□□ -0.18
LSM2-208ENST00000375661 GPKOWQ92917 476 aaPredicted RBP eCLIP13.95□□□□□ -0.18
LSM2-208ENST00000375661 INPP4AQ96PE3 977 aaPredicted RBP13.95□□□□□ -0.18
LSM2-208ENST00000375661 UIMC1Q96RL1 719 aa13.95□□□□□ -0.18
LSM2-208ENST00000375661 MAP3K14Q99558 947 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms