RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 MYH4Q9Y623 1939 aa11.96□□□□□ -0.5
LCN2-202ENST00000372998 HEXIM1O94992 359 aaKnown RBP11.95□□□□□ -0.5
LCN2-202ENST00000372998 AFPP02771 609 aaKnown RBP11.95□□□□□ -0.5
LCN2-202ENST00000372998 FERP16591 822 aa11.95□□□□□ -0.5
LCN2-202ENST00000372998 RFX1P22670 979 aa11.95□□□□□ -0.5
LCN2-202ENST00000372998 GBP1P32455 592 aa11.95□□□□□ -0.5
LCN2-202ENST00000372998 POLR2FP61218 127 aaKnown RBP11.95□□□□□ -0.5
LCN2-202ENST00000372998 SETQ01105 290 aaPredicted RBP11.95□□□□□ -0.5
LCN2-202ENST00000372998 GABPAQ06546 454 aa11.95□□□□□ -0.5
LCN2-202ENST00000372998 KCNMA1Q12791 1236 aa11.95□□□□□ -0.5
LCN2-202ENST00000372998 ADAM9Q13443 819 aa11.95□□□□□ -0.5
LCN2-202ENST00000372998 DRP2Q13474 957 aa11.95□□□□□ -0.5
LCN2-202ENST00000372998 BIRC3Q13489 604 aa11.95□□□□□ -0.5
LCN2-202ENST00000372998 KIAA0753Q2KHM9 967 aa11.95□□□□□ -0.5
LCN2-202ENST00000372998 CRY2Q49AN0 593 aa11.95□□□□□ -0.5
LCN2-202ENST00000372998 HERC4Q5GLZ8 1057 aaPredicted RBP11.95□□□□□ -0.5
LCN2-202ENST00000372998 MFSD14BQ5SR56 506 aa11.95□□□□□ -0.5
LCN2-202ENST00000372998 NFRKBQ6P4R8 1299 aa11.95□□□□□ -0.5
LCN2-202ENST00000372998 YTHDF3Q7Z739 585 aaKnown RBP11.95□□□□□ -0.5
LCN2-202ENST00000372998 TADA2BQ86TJ2 420 aa11.95□□□□□ -0.5
LCN2-202ENST00000372998 SLC44A5Q8NCS7 719 aa11.95□□□□□ -0.5
LCN2-202ENST00000372998 SPAG5Q96R06 1193 aa11.95□□□□□ -0.5
LCN2-202ENST00000372998 ISCUQ9H1K1 167 aa11.95□□□□□ -0.5
LCN2-202ENST00000372998 TAF1DQ9H5J8 278 aaPredicted RBP11.95□□□□□ -0.5
LCN2-202ENST00000372998 ARMCX3Q9UH62 379 aaPredicted RBP11.95□□□□□ -0.5
LCN2-202ENST00000372998 SERPINB13Q9UIV8 391 aa11.95□□□□□ -0.5
LCN2-202ENST00000372998 SYNPO2Q9UMS6 1093 aa11.95□□□□□ -0.5
LCN2-202ENST00000372998 DNM3Q9UQ16 869 aa11.95□□□□□ -0.5
LCN2-202ENST00000372998 MTMR7Q9Y216 660 aa11.95□□□□□ -0.5
LCN2-202ENST00000372998 WTIPA6NIX2 430 aaPredicted RBP11.94□□□□□ -0.5
LCN2-202ENST00000372998 KCNQ2O43526 872 aa11.94□□□□□ -0.5
LCN2-202ENST00000372998 SLC37A4O43826 429 aa11.94□□□□□ -0.5
LCN2-202ENST00000372998 PALMO75781 387 aa11.94□□□□□ -0.5
LCN2-202ENST00000372998 TDP2O95551 362 aa11.94□□□□□ -0.5
LCN2-202ENST00000372998 HOXA10P31260 410 aaPredicted RBP11.94□□□□□ -0.5
LCN2-202ENST00000372998 HSPA9P38646 679 aaKnown RBP11.94□□□□□ -0.5
LCN2-202ENST00000372998 SLC1A4P43007 532 aa11.94□□□□□ -0.5
LCN2-202ENST00000372998 GNGT1P63211 74 aa11.94□□□□□ -0.5
LCN2-202ENST00000372998 EVX2Q03828 476 aa11.94□□□□□ -0.5
LCN2-202ENST00000372998 GFPT1Q06210 699 aaPredicted RBP11.94□□□□□ -0.5
LCN2-202ENST00000372998 RAPGEF1Q13905 1077 aa11.94□□□□□ -0.5
LCN2-202ENST00000372998 BMT2Q1RMZ1 405 aa11.94□□□□□ -0.5
LCN2-202ENST00000372998 GPBP1Q86WP2 473 aa11.94□□□□□ -0.5
LCN2-202ENST00000372998 ADGRF4Q8IZF3 695 aa11.94□□□□□ -0.5
LCN2-202ENST00000372998 IQCKQ8N0W5 287 aa11.94□□□□□ -0.5
LCN2-202ENST00000372998 USP38Q8NB14 1042 aa11.94□□□□□ -0.5
LCN2-202ENST00000372998 BCAS4Q8TDM0 211 aa11.94□□□□□ -0.5
LCN2-202ENST00000372998 ARHGEF1Q92888 912 aaKnown RBP11.94□□□□□ -0.5
LCN2-202ENST00000372998 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.94□□□□□ -0.5
LCN2-202ENST00000372998 TRIM34Q9BYJ4 488 aa11.94□□□□□ -0.5
LCN2-202ENST00000372998 DHX36Q9H2U1 1008 aaKnown RBP11.94□□□□□ -0.5
LCN2-202ENST00000372998 JMJD4Q9H9V9 463 aa11.94□□□□□ -0.5
LCN2-202ENST00000372998 TMEM260Q9NX78 707 aa11.94□□□□□ -0.5
LCN2-202ENST00000372998 SEL1LQ9UBV2 794 aa11.94□□□□□ -0.5
LCN2-202ENST00000372998 DMGDHQ9UI17 866 aaKnown RBP11.94□□□□□ -0.5
LCN2-202ENST00000372998 ATF5Q9Y2D1 282 aaPredicted RBP11.94□□□□□ -0.5
LCN2-202ENST00000372998 ARFGEF1Q9Y6D6 1849 aa11.94□□□□□ -0.5
LCN2-202ENST00000372998 POTEMA6NI47 508 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 PGRMC1O00264 195 aaKnown RBP11.93□□□□□ -0.5
LCN2-202ENST00000372998 EIF3DO15371 548 aaKnown RBP eCLIP11.93□□□□□ -0.5
LCN2-202ENST00000372998 TFRCP02786 760 aaKnown RBP11.93□□□□□ -0.5
LCN2-202ENST00000372998 PLEKP08567 350 aaPredicted RBP11.93□□□□□ -0.5
LCN2-202ENST00000372998 XRCC5P13010 732 aaKnown RBP11.93□□□□□ -0.5
LCN2-202ENST00000372998 HSPA6P17066 643 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 EIF3BP55884 814 aaKnown RBP11.93□□□□□ -0.5
LCN2-202ENST00000372998 GPSM2P81274 684 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 KCNH2Q12809 1159 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 KNOP1Q1ED39 458 aaKnown RBP11.93□□□□□ -0.5
LCN2-202ENST00000372998 Q4G0T1 1027 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 TAX1BP1Q86VP1 789 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 SUGP1Q8IWZ8 645 aaKnown RBP11.93□□□□□ -0.5
LCN2-202ENST00000372998 SYT2Q8N9I0 419 aaPredicted RBP11.93□□□□□ -0.5
LCN2-202ENST00000372998 TBC1D5Q92609 795 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 P3H4Q92791 437 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 MKL1Q969V6 931 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 COA7Q96BR5 231 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 DRC1Q96MC2 740 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 INPP4AQ96PE3 977 aaPredicted RBP11.93□□□□□ -0.5
LCN2-202ENST00000372998 MKNK1Q9BUB5 465 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 MRIQ9BWK5 157 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 UBA5Q9GZZ9 404 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 TMX4Q9H1E5 349 aaPredicted RBP11.93□□□□□ -0.5
LCN2-202ENST00000372998 GANQ9H2C0 597 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 KCTD10Q9H3F6 313 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 EHMT1Q9H9B1 1298 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 EPB41L5Q9HCM4 733 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 KCNMB3Q9NPA1 279 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 NLRC4Q9NPP4 1024 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 FAM114A2Q9NRY5 505 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 RBM12Q9NTZ6 932 aaKnown RBP11.93□□□□□ -0.5
LCN2-202ENST00000372998 TYW1Q9NV66 732 aaKnown RBP11.93□□□□□ -0.5
LCN2-202ENST00000372998 SUCLA2Q9P2R7 463 aaPredicted RBP11.93□□□□□ -0.5
LCN2-202ENST00000372998 SRP68Q9UHB9 627 aaKnown RBP11.93□□□□□ -0.5
LCN2-202ENST00000372998 HDAC9Q9UKV0 1011 aa11.93□□□□□ -0.5
LCN2-202ENST00000372998 NDUFAB1O14561 156 aa11.92□□□□□ -0.5
LCN2-202ENST00000372998 NPM3O75607 178 aaKnown RBP11.92□□□□□ -0.5
LCN2-202ENST00000372998 NOL4O94818 638 aa11.92□□□□□ -0.5
LCN2-202ENST00000372998 KIF4AO95239 1232 aa11.92□□□□□ -0.5
LCN2-202ENST00000372998 SSBP05455 408 aaKnown RBP eCLIP11.92□□□□□ -0.5
LCN2-202ENST00000372998 H2AFZP0C0S5 128 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms