RNA–Protein interactions for RNA: ENST00000371834.6

BRD3-202, Transcript of bromodomain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD3, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-202ENST00000371834 NOX5Q96PH1 765 aa25.19■■□□□ 1.62
BRD3-202ENST00000371834 A0A0U1RQG5 324 aaPredicted RBP25.19■■□□□ 1.62
BRD3-202ENST00000371834 SERPING1P05155 500 aa25.19■■□□□ 1.62
BRD3-202ENST00000371834 USP11P51784 963 aa25.19■■□□□ 1.62
BRD3-202ENST00000371834 ADAM9Q13443 819 aa25.19■■□□□ 1.62
BRD3-202ENST00000371834 PRR16Q569H4 304 aa25.19■■□□□ 1.62
BRD3-202ENST00000371834 CCDC181Q5TID7 509 aa25.19■■□□□ 1.62
BRD3-202ENST00000371834 CCDC17Q96LX7 622 aa25.19■■□□□ 1.62
BRD3-202ENST00000371834 DBNDD1Q9H9R9 158 aa25.19■■□□□ 1.62
BRD3-202ENST00000371834 RBAK-RBAKDNI3L0D1 243 aa25.18■■□□□ 1.62
BRD3-202ENST00000371834 AGPSO00116 658 aa25.18■■□□□ 1.62
BRD3-202ENST00000371834 RAPGEF1Q13905 1077 aa25.18■■□□□ 1.62
BRD3-202ENST00000371834 MEX3CQ5U5Q3 659 aaKnown RBP25.18■■□□□ 1.62
BRD3-202ENST00000371834 CCDC70Q6NSX1 233 aa25.18■■□□□ 1.62
BRD3-202ENST00000371834 CATSPER3Q86XQ3 398 aa25.18■■□□□ 1.62
BRD3-202ENST00000371834 AENQ8WTP8 325 aaKnown RBP25.18■■□□□ 1.62
BRD3-202ENST00000371834 TBC1D5Q92609 795 aa25.18■■□□□ 1.62
BRD3-202ENST00000371834 NAP1L4Q99733 375 aaKnown RBP25.18■■□□□ 1.62
BRD3-202ENST00000371834 DNA2P51530 1060 aa25.18■■□□□ 1.62
BRD3-202ENST00000371834 SIAH1Q8IUQ4 282 aa25.18■■□□□ 1.62
BRD3-202ENST00000371834 KIAA0825Q8IV33 1275 aa25.18■■□□□ 1.62
BRD3-202ENST00000371834 EHD4Q9H223 541 aa25.18■■□□□ 1.62
BRD3-202ENST00000371834 DHX36Q9H2U1 1008 aaKnown RBP25.18■■□□□ 1.62
BRD3-202ENST00000371834 ANKRD31Q8N7Z5 1873 aa25.17■■□□□ 1.62
BRD3-202ENST00000371834 CYP3A7-CYP3A51PA0A087WV96 503 aa25.17■■□□□ 1.62
BRD3-202ENST00000371834 CYP3A7P24462 503 aa25.17■■□□□ 1.62
BRD3-202ENST00000371834 ARHGAP4P98171 946 aa25.17■■□□□ 1.62
BRD3-202ENST00000371834 CERKLQ49MI3 558 aaPredicted RBP25.17■■□□□ 1.62
BRD3-202ENST00000371834 LEKR1Q6ZMV7 388 aa25.17■■□□□ 1.62
BRD3-202ENST00000371834 GOLGB1Q14789 3259 aaKnown RBP25.17■■□□□ 1.62
BRD3-202ENST00000371834 GNA14O95837 355 aa25.17■■□□□ 1.62
BRD3-202ENST00000371834 MARSP56192 900 aaKnown RBP25.17■■□□□ 1.62
BRD3-202ENST00000371834 ITIH3Q06033 890 aa25.17■■□□□ 1.62
BRD3-202ENST00000371834 SPIRE1Q08AE8 756 aa25.17■■□□□ 1.62
BRD3-202ENST00000371834 USH1GQ495M9 461 aa25.17■■□□□ 1.62
BRD3-202ENST00000371834 FAM133AQ8N9E0 248 aa25.17■■□□□ 1.62
BRD3-202ENST00000371834 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.17■■□□□ 1.62
BRD3-202ENST00000371834 FAM184BQ9ULE4 1060 aa25.17■■□□□ 1.62
BRD3-202ENST00000371834 PABPC4Q13310 644 aaKnown RBP eCLIP25.16■■□□□ 1.62
BRD3-202ENST00000371834 SND1Q7KZF4 910 aaKnown RBP eCLIP25.16■■□□□ 1.62
BRD3-202ENST00000371834 ETNPPLQ8TBG4 499 aa25.16■■□□□ 1.62
BRD3-202ENST00000371834 SYN2Q92777 582 aaPredicted RBP25.16■■□□□ 1.62
BRD3-202ENST00000371834 MBOAT7Q96N66 472 aa25.16■■□□□ 1.62
BRD3-202ENST00000371834 POLD4Q9HCU8 107 aa25.16■■□□□ 1.62
BRD3-202ENST00000371834 RBM12Q9NTZ6 932 aaKnown RBP25.16■■□□□ 1.62
BRD3-202ENST00000371834 FRMD3A2A2Y4 597 aa25.16■■□□□ 1.62
BRD3-202ENST00000371834 KCNH2Q12809 1159 aa25.16■■□□□ 1.62
BRD3-202ENST00000371834 SLC27A3Q5K4L6 730 aa25.16■■□□□ 1.62
BRD3-202ENST00000371834 HAUS3Q68CZ6 603 aa25.16■■□□□ 1.62
BRD3-202ENST00000371834 FOXR1Q6PIV2 292 aa25.16■■□□□ 1.62
BRD3-202ENST00000371834 SH3BP5LQ7L8J4 393 aa25.16■■□□□ 1.62
BRD3-202ENST00000371834 DCAF4Q8WV16 495 aa25.16■■□□□ 1.62
BRD3-202ENST00000371834 MKL1Q969V6 931 aa25.16■■□□□ 1.62
BRD3-202ENST00000371834 PACSIN1Q9BY11 444 aa25.16■■□□□ 1.62
BRD3-202ENST00000371834 TRIM34Q9BYJ4 488 aa25.16■■□□□ 1.62
BRD3-202ENST00000371834 A0A087X0T9 212 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 ONECUT3O60422 494 aaPredicted RBP25.15■■□□□ 1.62
BRD3-202ENST00000371834 PALMO75781 387 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 FAM228BP0C875 321 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 ACTN1P12814 892 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 NR2F2P24468 414 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 KLRC1P26715 233 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 RNF10Q8N5U6 811 aaKnown RBP25.15■■□□□ 1.62
BRD3-202ENST00000371834 CRYGNQ8WXF5 182 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 GLT8D2Q9H1C3 349 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 NUCKS1Q9H1E3 243 aaKnown RBP25.15■■□□□ 1.62
BRD3-202ENST00000371834 AFF2P51816 1311 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 TRIM37O94972 964 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 GDF11O95390 407 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 FTCDO95954 541 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 RBM5P52756 815 aaKnown RBP eCLIP25.15■■□□□ 1.62
BRD3-202ENST00000371834 GIT2Q14161 759 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 ARHGAP27Q6ZUM4 889 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 SLFN12Q8IYM2 578 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 AFAP1L1Q8TED9 768 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 GANQ9H2C0 597 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 BCAS3Q9H6U6 928 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 FAM198AQ9UFP1 575 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 ADAMTS1Q9UHI8 967 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 SPATA31A6Q5VVP1 1343 aa25.15■■□□□ 1.62
BRD3-202ENST00000371834 EPS15P42566 896 aa25.14■■□□□ 1.62
BRD3-202ENST00000371834 PAFAH1B1P43034 410 aa25.14■■□□□ 1.62
BRD3-202ENST00000371834 ZC3H3Q8IXZ2 948 aaKnown RBP25.14■■□□□ 1.62
BRD3-202ENST00000371834 NYAP2Q9P242 653 aa25.14■■□□□ 1.62
BRD3-202ENST00000371834 SIPA1L1O43166 1804 aa25.14■■□□□ 1.61
BRD3-202ENST00000371834 FAM86B1E9PN63 330 aa25.14■■□□□ 1.61
BRD3-202ENST00000371834 CETN3O15182 167 aa25.14■■□□□ 1.61
BRD3-202ENST00000371834 FAM86B2P0C5J1 330 aa25.14■■□□□ 1.61
BRD3-202ENST00000371834 SPATA31C1P0DKV0 1188 aa25.14■■□□□ 1.61
BRD3-202ENST00000371834 KLHL30Q0D2K2 578 aa25.14■■□□□ 1.61
BRD3-202ENST00000371834 ZDHHC15Q96MV8 337 aa25.14■■□□□ 1.61
BRD3-202ENST00000371834 TULP2O00295 520 aa25.13■■□□□ 1.61
BRD3-202ENST00000371834 NPR1P16066 1061 aa25.13■■□□□ 1.61
BRD3-202ENST00000371834 HOXD13P35453 343 aa25.13■■□□□ 1.61
BRD3-202ENST00000371834 SLC18A3Q16572 532 aa25.13■■□□□ 1.61
BRD3-202ENST00000371834 SFR1Q86XK3 245 aa25.13■■□□□ 1.61
BRD3-202ENST00000371834 LENG9Q96B70 501 aa25.13■■□□□ 1.61
BRD3-202ENST00000371834 ZFP91Q96JP5 570 aaPredicted RBP25.13■■□□□ 1.61
BRD3-202ENST00000371834 REEP2Q9BRK0 252 aa25.13■■□□□ 1.61
BRD3-202ENST00000371834 PACSIN2Q9UNF0 486 aaPredicted RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms