RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 NECAB3Q96P71 396 aaPredicted RBP18.42■□□□□ 0.54
CKS1B-202ENST00000368436 BDP1A6H8Y1 2624 aa18.41■□□□□ 0.54
CKS1B-202ENST00000368436 XIRP2A4UGR9 3374 aa18.41■□□□□ 0.54
CKS1B-202ENST00000368436 KCNA2P16389 499 aa18.41■□□□□ 0.54
CKS1B-202ENST00000368436 ITGB5P18084 799 aa18.41■□□□□ 0.54
CKS1B-202ENST00000368436 TMTC3Q6ZXV5 915 aa18.41■□□□□ 0.54
CKS1B-202ENST00000368436 SGMS1Q86VZ5 419 aa18.41■□□□□ 0.54
CKS1B-202ENST00000368436 MYOCDQ8IZQ8 938 aa18.41■□□□□ 0.54
CKS1B-202ENST00000368436 FANCBQ8NB91 859 aa18.41■□□□□ 0.54
CKS1B-202ENST00000368436 LMBR1Q8WVP7 490 aa18.41■□□□□ 0.54
CKS1B-202ENST00000368436 HLA-CQ95604 372 aa18.41■□□□□ 0.54
CKS1B-202ENST00000368436 MTUS1Q9ULD2 1270 aa18.41■□□□□ 0.54
CKS1B-202ENST00000368436 UBIAD1Q9Y5Z9 338 aa18.41■□□□□ 0.54
CKS1B-202ENST00000368436 SLC12A7Q9Y666 1083 aa18.41■□□□□ 0.54
CKS1B-202ENST00000368436 NRCAMQ92823 1304 aa18.41■□□□□ 0.54
CKS1B-202ENST00000368436 COL4A6Q14031 1691 aa18.41■□□□□ 0.54
CKS1B-202ENST00000368436 GSTTP1A0A1W2PQM5 241 aa18.4■□□□□ 0.54
CKS1B-202ENST00000368436 CTSHP09668 335 aa18.4■□□□□ 0.54
CKS1B-202ENST00000368436 TCF7P36402 384 aaPredicted RBP18.4■□□□□ 0.54
CKS1B-202ENST00000368436 ARHGAP4P98171 946 aa18.4■□□□□ 0.54
CKS1B-202ENST00000368436 SP4Q02446 784 aa18.4■□□□□ 0.54
CKS1B-202ENST00000368436 RPAINQ86UA6 219 aa18.4■□□□□ 0.54
CKS1B-202ENST00000368436 TOP1MTQ969P6 601 aa18.4■□□□□ 0.54
CKS1B-202ENST00000368436 NLRC5Q86WI3 1866 aa18.39■□□□□ 0.54
CKS1B-202ENST00000368436 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.39■□□□□ 0.53
CKS1B-202ENST00000368436 hCG_1642624A0A1W2PR95 340 aa18.39■□□□□ 0.53
CKS1B-202ENST00000368436 UBE2SQ16763 222 aa18.39■□□□□ 0.53
CKS1B-202ENST00000368436 RAB11FIP4Q86YS3 637 aa18.39■□□□□ 0.53
CKS1B-202ENST00000368436 SEPT1Q8WYJ6 367 aa18.39■□□□□ 0.53
CKS1B-202ENST00000368436 APBB2Q92870 758 aa18.39■□□□□ 0.53
CKS1B-202ENST00000368436 C17orf80Q9BSJ5 609 aa18.39■□□□□ 0.53
CKS1B-202ENST00000368436 LRRC2Q9BYS8 371 aa18.39■□□□□ 0.53
CKS1B-202ENST00000368436 ANO2Q9NQ90 1003 aa18.39■□□□□ 0.53
CKS1B-202ENST00000368436 PCDHA6Q9UN73 950 aa18.39■□□□□ 0.53
CKS1B-202ENST00000368436 PCDHA8Q9Y5H6 950 aa18.39■□□□□ 0.53
CKS1B-202ENST00000368436 RALGAPA2Q2PPJ7 1873 aa18.38■□□□□ 0.53
CKS1B-202ENST00000368436 SPDYE3A6NKU9 549 aa18.38■□□□□ 0.53
CKS1B-202ENST00000368436 MAFGO15525 162 aa18.38■□□□□ 0.53
CKS1B-202ENST00000368436 CHRNA1P02708 482 aa18.38■□□□□ 0.53
CKS1B-202ENST00000368436 CCDC82Q8N4S0 544 aa18.38■□□□□ 0.53
CKS1B-202ENST00000368436 FBXO22Q8NEZ5 403 aa18.38■□□□□ 0.53
CKS1B-202ENST00000368436 SAMD11Q96NU1 681 aa18.38■□□□□ 0.53
CKS1B-202ENST00000368436 JADE2Q9NQC1 790 aa18.38■□□□□ 0.53
CKS1B-202ENST00000368436 ERAP1Q9NZ08 941 aa18.38■□□□□ 0.53
CKS1B-202ENST00000368436 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.37■□□□□ 0.53
CKS1B-202ENST00000368436 MTMR1Q13613 665 aa18.37■□□□□ 0.53
CKS1B-202ENST00000368436 TAF2Q6P1X5 1199 aa18.37■□□□□ 0.53
CKS1B-202ENST00000368436 TEX2Q8IWB9 1127 aa18.37■□□□□ 0.53
CKS1B-202ENST00000368436 EHMT1Q9H9B1 1298 aa18.37■□□□□ 0.53
CKS1B-202ENST00000368436 BRWD1Q9NSI6 2320 aa18.37■□□□□ 0.53
CKS1B-202ENST00000368436 MBLAC1A4D2B0 266 aaPredicted RBP18.36■□□□□ 0.53
CKS1B-202ENST00000368436 COL9A1P20849 921 aa18.36■□□□□ 0.53
CKS1B-202ENST00000368436 MGAT3Q09327 533 aa18.36■□□□□ 0.53
CKS1B-202ENST00000368436 PPFIA1Q13136 1202 aa18.36■□□□□ 0.53
CKS1B-202ENST00000368436 BMP2KLQ5H9B9 411 aa18.36■□□□□ 0.53
CKS1B-202ENST00000368436 MARCH8Q5T0T0 291 aa18.36■□□□□ 0.53
CKS1B-202ENST00000368436 RNF20Q5VTR2 975 aa18.36■□□□□ 0.53
CKS1B-202ENST00000368436 APOA5Q6Q788 366 aa18.36■□□□□ 0.53
CKS1B-202ENST00000368436 SYNE3Q6ZMZ3 975 aa18.36■□□□□ 0.53
CKS1B-202ENST00000368436 RUFY4Q6ZNE9 571 aa18.36■□□□□ 0.53
CKS1B-202ENST00000368436 HEATR3Q7Z4Q2 680 aa18.36■□□□□ 0.53
CKS1B-202ENST00000368436 MICU3Q86XE3 530 aa18.36■□□□□ 0.53
CKS1B-202ENST00000368436 YME1L1Q96TA2 773 aa18.36■□□□□ 0.53
CKS1B-202ENST00000368436 IFIH1Q9BYX4 1025 aaKnown RBP18.36■□□□□ 0.53
CKS1B-202ENST00000368436 SMARCAD1Q9H4L7 1026 aa18.36■□□□□ 0.53
CKS1B-202ENST00000368436 RBM28Q9NW13 759 aaKnown RBP18.36■□□□□ 0.53
CKS1B-202ENST00000368436 CNTNAP5Q8WYK1 1306 aa18.35■□□□□ 0.53
CKS1B-202ENST00000368436 UPP2O95045 317 aa18.35■□□□□ 0.53
CKS1B-202ENST00000368436 EXOSC10Q01780 885 aaKnown RBP18.35■□□□□ 0.53
CKS1B-202ENST00000368436 FUT2Q10981 343 aa18.35■□□□□ 0.53
CKS1B-202ENST00000368436 GRIK4Q16099 956 aa18.35■□□□□ 0.53
CKS1B-202ENST00000368436 TSGA10IPQ3SY00 556 aa18.35■□□□□ 0.53
CKS1B-202ENST00000368436 EPC2Q52LR7 807 aa18.35■□□□□ 0.53
CKS1B-202ENST00000368436 WWC2Q6AWC2 1192 aa18.35■□□□□ 0.53
CKS1B-202ENST00000368436 NEK1Q96PY6 1258 aa18.35■□□□□ 0.53
CKS1B-202ENST00000368436 H3BNC9 293 aa18.34■□□□□ 0.53
CKS1B-202ENST00000368436 TYW1BQ6NUM6 668 aa18.34■□□□□ 0.53
CKS1B-202ENST00000368436 DHX32Q7L7V1 743 aaKnown RBP18.34■□□□□ 0.53
CKS1B-202ENST00000368436 RSPH3Q86UC2 560 aa18.34■□□□□ 0.53
CKS1B-202ENST00000368436 GLG1Q92896 1179 aa18.34■□□□□ 0.53
CKS1B-202ENST00000368436 MRPL38Q96DV4 380 aaKnown RBP18.34■□□□□ 0.53
CKS1B-202ENST00000368436 PCYT2Q99447 389 aa18.34■□□□□ 0.53
CKS1B-202ENST00000368436 MXRA8Q9BRK3 442 aa18.34■□□□□ 0.53
CKS1B-202ENST00000368436 UBE2ZQ9H832 354 aaPredicted RBP18.34■□□□□ 0.53
CKS1B-202ENST00000368436 RIC8AQ9NPQ8 531 aa18.34■□□□□ 0.53
CKS1B-202ENST00000368436 KCNH7Q9NS40 1196 aa18.34■□□□□ 0.53
CKS1B-202ENST00000368436 PKD2L1Q9P0L9 805 aa18.34■□□□□ 0.53
CKS1B-202ENST00000368436 TUBE1Q9UJT0 475 aa18.34■□□□□ 0.53
CKS1B-202ENST00000368436 BRPF3Q9ULD4 1205 aa18.34■□□□□ 0.53
CKS1B-202ENST00000368436 LOXHD1Q8IVV2 1947 aa18.33■□□□□ 0.53
CKS1B-202ENST00000368436 MARK3P27448 753 aa18.33■□□□□ 0.52
CKS1B-202ENST00000368436 LPIN1Q14693 890 aa18.33■□□□□ 0.52
CKS1B-202ENST00000368436 PTPROQ16827 1216 aa18.33■□□□□ 0.52
CKS1B-202ENST00000368436 PPP1R18Q6NYC8 613 aa18.33■□□□□ 0.52
CKS1B-202ENST00000368436 TMEM192Q8IY95 271 aa18.33■□□□□ 0.52
CKS1B-202ENST00000368436 DNAJB3Q8WWF6 145 aa18.33■□□□□ 0.52
CKS1B-202ENST00000368436 JPH1Q9HDC5 661 aaPredicted RBP18.33■□□□□ 0.52
CKS1B-202ENST00000368436 TTC3P53804 2025 aa18.33■□□□□ 0.52
CKS1B-202ENST00000368436 NFASCO94856 1347 aa18.32■□□□□ 0.52
CKS1B-202ENST00000368436 ATG2AQ2TAZ0 1938 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms