RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 ZBTB16Q05516 673 aa13.43□□□□□ -0.26
COLCA1-201ENST00000355430 EXOC3L4Q17RC7 722 aa13.43□□□□□ -0.26
COLCA1-201ENST00000355430 KCTD1Q719H9 257 aa13.43□□□□□ -0.26
COLCA1-201ENST00000355430 USP17L10C9JJH3 530 aa13.43□□□□□ -0.26
COLCA1-201ENST00000355430 SORBS3O60504 671 aa13.43□□□□□ -0.26
COLCA1-201ENST00000355430 CAMTA2O94983 1202 aa13.43□□□□□ -0.26
COLCA1-201ENST00000355430 MAP2K2P36507 400 aa13.43□□□□□ -0.26
COLCA1-201ENST00000355430 RCAN1P53805 252 aa13.43□□□□□ -0.26
COLCA1-201ENST00000355430 CLNS1AP54105 237 aaKnown RBP13.43□□□□□ -0.26
COLCA1-201ENST00000355430 SREBF2Q12772 1141 aa13.43□□□□□ -0.26
COLCA1-201ENST00000355430 IQCGQ9H095 443 aaKnown RBP13.43□□□□□ -0.26
COLCA1-201ENST00000355430 BAIAP2L1Q9UHR4 511 aa13.43□□□□□ -0.26
COLCA1-201ENST00000355430 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.43□□□□□ -0.26
COLCA1-201ENST00000355430 MIS18BP1Q6P0N0 1132 aa13.43□□□□□ -0.26
COLCA1-201ENST00000355430 RIC8AQ9NPQ8 531 aa13.43□□□□□ -0.26
COLCA1-201ENST00000355430 STK17AQ9UEE5 414 aa13.43□□□□□ -0.26
COLCA1-201ENST00000355430 NFU1Q9UMS0 254 aa13.43□□□□□ -0.26
COLCA1-201ENST00000355430 GH2P01242 217 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 ATF7P17544 494 aaPredicted RBP13.42□□□□□ -0.26
COLCA1-201ENST00000355430 NR2F2P24468 414 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 FXR1P51114 621 aaKnown RBP eCLIP13.42□□□□□ -0.26
COLCA1-201ENST00000355430 FAM102BQ5T8I3 360 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 TRIM7Q9C029 511 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 PRPF6O94906 941 aaKnown RBP13.42□□□□□ -0.26
COLCA1-201ENST00000355430 POLGP54098 1239 aaPredicted RBP13.42□□□□□ -0.26
COLCA1-201ENST00000355430 ATP2C1P98194 919 aaPredicted RBP13.42□□□□□ -0.26
COLCA1-201ENST00000355430 C6orf163Q5TEZ5 329 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 ALS2CLQ60I27 953 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 ANKRD42Q8N9B4 389 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 TBC1D16Q8TBP0 767 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 RPS6KC1Q96S38 1066 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 ZFYVE28Q9HCC9 887 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 SH3GLB2Q9NR46 395 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 CACNB3P54284 484 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 DPYDQ12882 1025 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 C9orf131Q5VYM1 1079 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 RNF34Q969K3 372 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 UBE2Q2LH0YL09 131 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 SERPING1P05155 500 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 FKBP3Q00688 224 aaKnown RBP13.42□□□□□ -0.26
COLCA1-201ENST00000355430 TAF1CQ15572 869 aaPredicted RBP13.42□□□□□ -0.26
COLCA1-201ENST00000355430 ZNF365Q70YC5 407 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 CROCCP2Q86T23 111 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 PPP1R14CQ8TAE6 165 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 CHP1Q99653 195 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 STIM2Q9P246 746 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 CDK8P49336 464 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 ATP11AP98196 1134 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 CLUL1Q15846 466 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 RASGRP2Q7LDG7 609 aa13.42□□□□□ -0.26
COLCA1-201ENST00000355430 EIF3CLB5ME19 914 aaKnown RBP13.41□□□□□ -0.26
COLCA1-201ENST00000355430 NCK2O43639 380 aa13.41□□□□□ -0.26
COLCA1-201ENST00000355430 CYP4A11Q02928 519 aa13.41□□□□□ -0.26
COLCA1-201ENST00000355430 ITPK1Q13572 414 aa13.41□□□□□ -0.26
COLCA1-201ENST00000355430 GKAP1Q5VSY0 366 aaPredicted RBP13.41□□□□□ -0.26
COLCA1-201ENST00000355430 COL23A1Q86Y22 540 aaPredicted RBP13.41□□□□□ -0.26
COLCA1-201ENST00000355430 GJA10Q969M2 543 aa13.41□□□□□ -0.26
COLCA1-201ENST00000355430 EIF3CQ99613 913 aaKnown RBP13.41□□□□□ -0.26
COLCA1-201ENST00000355430 CPVLQ9H3G5 476 aa13.41□□□□□ -0.26
COLCA1-201ENST00000355430 TRIM10Q9UDY6 481 aa13.41□□□□□ -0.26
COLCA1-201ENST00000355430 LIMA1Q9UHB6 759 aaKnown RBP13.41□□□□□ -0.26
COLCA1-201ENST00000355430 IFT172Q9UG01 1749 aa13.41□□□□□ -0.26
COLCA1-201ENST00000355430 KRT19P08727 400 aa13.41□□□□□ -0.26
COLCA1-201ENST00000355430 PLA2G4AP47712 749 aa13.41□□□□□ -0.26
COLCA1-201ENST00000355430 UBXN2AP68543 259 aa13.41□□□□□ -0.26
COLCA1-201ENST00000355430 MXRA7P84157 204 aa13.41□□□□□ -0.26
COLCA1-201ENST00000355430 EPB41L4AQ9HCS5 686 aaPredicted RBP13.41□□□□□ -0.26
COLCA1-201ENST00000355430 MAGEA9P43362 315 aa13.41□□□□□ -0.26
COLCA1-201ENST00000355430 HUNKP57058 714 aa13.41□□□□□ -0.26
COLCA1-201ENST00000355430 NFRKBQ6P4R8 1299 aa13.41□□□□□ -0.26
COLCA1-201ENST00000355430 LRRN4CLQ8ND94 238 aa13.41□□□□□ -0.26
COLCA1-201ENST00000355430 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.41□□□□□ -0.26
COLCA1-201ENST00000355430 FHOD1Q9Y613 1164 aa13.41□□□□□ -0.26
COLCA1-201ENST00000355430 A0A1B0GUA9 196 aa13.41□□□□□ -0.26
COLCA1-201ENST00000355430 H2AFXP16104 143 aaPredicted RBP13.41□□□□□ -0.26
COLCA1-201ENST00000355430 YWHAEP62258 255 aaKnown RBP13.41□□□□□ -0.26
COLCA1-201ENST00000355430 PTPAQ15257 358 aa13.41□□□□□ -0.26
COLCA1-201ENST00000355430 SF3B3Q15393 1217 aaKnown RBP13.41□□□□□ -0.26
COLCA1-201ENST00000355430 UBE2SQ16763 222 aa13.41□□□□□ -0.26
COLCA1-201ENST00000355430 LRRC53A6NM62 1247 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 TNPO2O14787 897 aaKnown RBP13.4□□□□□ -0.26
COLCA1-201ENST00000355430 XPOTO43592 962 aaKnown RBP13.4□□□□□ -0.26
COLCA1-201ENST00000355430 MTA3Q9BTC8 594 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 WDR70Q9NW82 654 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 PARP2Q9UGN5 583 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 HERC5Q9UII4 1024 aaKnown RBP13.4□□□□□ -0.26
COLCA1-201ENST00000355430 ANO9A1A5B4 782 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 NR1D1P20393 614 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 GFPT1Q06210 699 aaPredicted RBP13.4□□□□□ -0.26
COLCA1-201ENST00000355430 PDCLQ13371 301 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 PPP2R5AQ15172 486 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 NKX1-1Q15270 411 aaPredicted RBP13.4□□□□□ -0.26
COLCA1-201ENST00000355430 RSBN1LQ6PCB5 846 aaPredicted RBP13.4□□□□□ -0.26
COLCA1-201ENST00000355430 DCAF4Q8WV16 495 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 ZBED2Q9BTP6 218 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 PHF20Q9BVI0 1012 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 FEM1BQ9UK73 627 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 CD2APQ9Y5K6 639 aa13.4□□□□□ -0.26
COLCA1-201ENST00000355430 CELF2O95319 508 aaKnown RBP13.4□□□□□ -0.26
COLCA1-201ENST00000355430 AFPP02771 609 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms