RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 CXCR5P32302 372 aa17.14■□□□□ 0.33
UBAP1-201ENST00000297661 LRCH2Q5VUJ6 765 aa17.14■□□□□ 0.33
UBAP1-201ENST00000297661 CNNM4Q6P4Q7 775 aa17.14■□□□□ 0.33
UBAP1-201ENST00000297661 ZNF662Q6ZS27 426 aa17.14■□□□□ 0.33
UBAP1-201ENST00000297661 SNX29Q8TEQ0 813 aa17.14■□□□□ 0.33
UBAP1-201ENST00000297661 NOC3LQ8WTT2 800 aaKnown RBP17.14■□□□□ 0.33
UBAP1-201ENST00000297661 CAPN6Q9Y6Q1 641 aa17.14■□□□□ 0.33
UBAP1-201ENST00000297661 CDR1P51861 262 aa17.14■□□□□ 0.33
UBAP1-201ENST00000297661 GTF2IP78347 998 aa17.14■□□□□ 0.33
UBAP1-201ENST00000297661 CACNB1Q02641 598 aaPredicted RBP17.14■□□□□ 0.33
UBAP1-201ENST00000297661 DALRD3Q5D0E6 543 aaKnown RBP17.14■□□□□ 0.33
UBAP1-201ENST00000297661 KDM7AQ6ZMT4 941 aa17.14■□□□□ 0.33
UBAP1-201ENST00000297661 CEP57Q86XR8 500 aa17.14■□□□□ 0.33
UBAP1-201ENST00000297661 FAXDC2Q96IV6 333 aa17.14■□□□□ 0.33
UBAP1-201ENST00000297661 CUEDC2Q9H467 287 aa17.14■□□□□ 0.33
UBAP1-201ENST00000297661 EHD2Q9NZN4 543 aa17.14■□□□□ 0.33
UBAP1-201ENST00000297661 ARHGAP20Q9P2F6 1191 aa17.14■□□□□ 0.33
UBAP1-201ENST00000297661 GGA1Q9UJY5 639 aa17.14■□□□□ 0.33
UBAP1-201ENST00000297661 SEC24CP53992 1094 aa17.13■□□□□ 0.33
UBAP1-201ENST00000297661 AMPD3Q01432 767 aa17.13■□□□□ 0.33
UBAP1-201ENST00000297661 APBA1Q02410 837 aa17.13■□□□□ 0.33
UBAP1-201ENST00000297661 PLCB4Q15147 1175 aa17.13■□□□□ 0.33
UBAP1-201ENST00000297661 GPR162Q16538 588 aa17.13■□□□□ 0.33
UBAP1-201ENST00000297661 SPATA4Q8NEY3 305 aa17.13■□□□□ 0.33
UBAP1-201ENST00000297661 LARP4BQ92615 738 aaKnown RBP17.13■□□□□ 0.33
UBAP1-201ENST00000297661 RUBCNQ92622 972 aa17.13■□□□□ 0.33
UBAP1-201ENST00000297661 MTMR9Q96QG7 549 aa17.13■□□□□ 0.33
UBAP1-201ENST00000297661 NDST4Q9H3R1 872 aa17.13■□□□□ 0.33
UBAP1-201ENST00000297661 PPP1R37O75864 691 aa17.13■□□□□ 0.33
UBAP1-201ENST00000297661 ECM2O94769 699 aaPredicted RBP17.13■□□□□ 0.33
UBAP1-201ENST00000297661 MOCS3O95396 460 aa17.13■□□□□ 0.33
UBAP1-201ENST00000297661 ADCY7P51828 1080 aa17.13■□□□□ 0.33
UBAP1-201ENST00000297661 HDLBPQ00341 1268 aaKnown RBP17.13■□□□□ 0.33
UBAP1-201ENST00000297661 VWA3BQ502W6 1294 aa17.13■□□□□ 0.33
UBAP1-201ENST00000297661 RRAGAQ7L523 313 aa17.13■□□□□ 0.33
UBAP1-201ENST00000297661 FAM114A1Q8IWE2 563 aa17.13■□□□□ 0.33
UBAP1-201ENST00000297661 CCT8L2Q96SF2 557 aa17.13■□□□□ 0.33
UBAP1-201ENST00000297661 TANGO6Q9C0B7 1094 aa17.13■□□□□ 0.33
UBAP1-201ENST00000297661 SNX12Q9UMY4 172 aa17.13■□□□□ 0.33
UBAP1-201ENST00000297661 PPP1R12AO14974 1030 aaPredicted RBP17.12■□□□□ 0.33
UBAP1-201ENST00000297661 PAX7P23759 505 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 HOXA10P31260 410 aaPredicted RBP17.12■□□□□ 0.33
UBAP1-201ENST00000297661 EIF4A3P38919 411 aaKnown RBP17.12■□□□□ 0.33
UBAP1-201ENST00000297661 KIF5AQ12840 1032 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 PTGISQ16647 500 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 NLRP14Q86W24 1093 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 DDX12PQ92771 950 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 NUP58Q9BVL2 599 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 FGFBP2Q9BYJ0 223 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 STIM2Q9P246 746 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 LRRC53A6NM62 1247 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 TMCO5BA8MYB1 307 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 PPP1R11O60927 126 aaPredicted RBP17.12■□□□□ 0.33
UBAP1-201ENST00000297661 SPA17Q15506 151 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 CENPPQ6IPU0 288 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 MYCBPAPQ8TBZ2 947 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 CAVIN3Q969G5 261 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 IFIH1Q9BYX4 1025 aaKnown RBP17.12■□□□□ 0.33
UBAP1-201ENST00000297661 KIF13BQ9NQT8 1826 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 NCK2O43639 380 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 NEBLO76041 1014 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 ALDH1B1P30837 517 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 DNA2P51530 1060 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 MRPL12P52815 198 aaKnown RBP17.12■□□□□ 0.33
UBAP1-201ENST00000297661 KCTD1Q719H9 257 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 TMC4Q7Z404 712 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 ZSCAN29Q8IWY8 852 aaPredicted RBP17.12■□□□□ 0.33
UBAP1-201ENST00000297661 CNKSR1Q969H4 720 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 ERGIC2Q96RQ1 377 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 MAGEF1Q9HAY2 307 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 NLRC4Q9NPP4 1024 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 DDX4Q9NQI0 724 aaKnown RBP17.12■□□□□ 0.33
UBAP1-201ENST00000297661 MTMR4Q9NYA4 1195 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 DDX20Q9UHI6 824 aaKnown RBP17.12■□□□□ 0.33
UBAP1-201ENST00000297661 DAGLAQ9Y4D2 1042 aa17.12■□□□□ 0.33
UBAP1-201ENST00000297661 SCNN1DP51172 638 aa17.11■□□□□ 0.33
UBAP1-201ENST00000297661 SNCBQ16143 134 aa17.11■□□□□ 0.33
UBAP1-201ENST00000297661 ENOX2Q16206 610 aaKnown RBP17.11■□□□□ 0.33
UBAP1-201ENST00000297661 STYK1Q6J9G0 422 aa17.11■□□□□ 0.33
UBAP1-201ENST00000297661 CCDC114Q96M63 670 aa17.11■□□□□ 0.33
UBAP1-201ENST00000297661 PURBQ96QR8 312 aaKnown RBP17.11■□□□□ 0.33
UBAP1-201ENST00000297661 RIOX1Q9H6W3 641 aa17.11■□□□□ 0.33
UBAP1-201ENST00000297661 SIK3Q9Y2K2 1263 aa17.11■□□□□ 0.33
UBAP1-201ENST00000297661 NPHP3-ACAD11A0A0J9YXS1 232 aa17.11■□□□□ 0.33
UBAP1-201ENST00000297661 MPHOSPH10O00566 681 aaKnown RBP17.11■□□□□ 0.33
UBAP1-201ENST00000297661 AKR1B10O60218 316 aa17.11■□□□□ 0.33
UBAP1-201ENST00000297661 MARCH6O60337 910 aa17.11■□□□□ 0.33
UBAP1-201ENST00000297661 NR1D1P20393 614 aa17.11■□□□□ 0.33
UBAP1-201ENST00000297661 KIF11P52732 1056 aa17.11■□□□□ 0.33
UBAP1-201ENST00000297661 VAV2P52735 878 aa17.11■□□□□ 0.33
UBAP1-201ENST00000297661 RASSF7Q02833 373 aa17.11■□□□□ 0.33
UBAP1-201ENST00000297661 ITIH3Q06033 890 aa17.11■□□□□ 0.33
UBAP1-201ENST00000297661 SHROOM1Q2M3G4 852 aaPredicted RBP17.11■□□□□ 0.33
UBAP1-201ENST00000297661 HAUS3Q68CZ6 603 aa17.11■□□□□ 0.33
UBAP1-201ENST00000297661 CRAMP1Q96RY5 1269 aa17.11■□□□□ 0.33
UBAP1-201ENST00000297661 PCDHA13Q9Y5I0 950 aa17.11■□□□□ 0.33
UBAP1-201ENST00000297661 ZNF233A6NK53 670 aa17.1■□□□□ 0.33
UBAP1-201ENST00000297661 GFPT1Q06210 699 aaPredicted RBP17.1■□□□□ 0.33
UBAP1-201ENST00000297661 TMEM266Q2M3C6 531 aa17.1■□□□□ 0.33
UBAP1-201ENST00000297661 CFAP58Q5T655 872 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms