RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 FAM83BQ5T0W9 1011 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 CCDC181Q5TID7 509 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 HGSNATQ68CP4 663 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 EMBQ6PCB8 327 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 BTNL9Q6UXG8 535 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 LEKR1Q6ZMV7 388 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 OSBPL9Q96SU4 736 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 CRACR2AQ9BSW2 395 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 POLR3CQ9BUI4 534 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 HPCAL4Q9UM19 191 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 DNM3Q9UQ16 869 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 UBE4BO95155 1302 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 PIK3CDO00329 1044 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 EPHB6O15197 1021 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 ENTPD3O75355 529 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 MMP10P09238 476 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 EEF2P13639 858 aaKnown RBP11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 KCNMA1Q12791 1236 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 SLC18A3Q16572 532 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 NFIL3Q16649 462 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 CFAP221Q4G0U5 840 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 STYK1Q6J9G0 422 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 KCTD1Q719H9 257 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 SYT2Q8N9I0 419 aaPredicted RBP11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 CCDC102AQ96A19 550 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 VPS18Q9P253 973 aa11.03□□□□□ -0.64
TNFRSF11B-201ENST00000297350 GTPBP10A4D1E9 387 aaKnown RBP11.02□□□□□ -0.65
TNFRSF11B-201ENST00000297350 SPDYE3A6NKU9 549 aa11.02□□□□□ -0.65
TNFRSF11B-201ENST00000297350 A6NNZ2 444 aa11.02□□□□□ -0.65
TNFRSF11B-201ENST00000297350 GFPT2O94808 682 aa11.02□□□□□ -0.65
TNFRSF11B-201ENST00000297350 ACTN2P35609 894 aa11.02□□□□□ -0.65
TNFRSF11B-201ENST00000297350 ICA1Q05084 483 aa11.02□□□□□ -0.65
TNFRSF11B-201ENST00000297350 SPIRE1Q08AE8 756 aa11.02□□□□□ -0.65
TNFRSF11B-201ENST00000297350 NAB2Q15742 525 aa11.02□□□□□ -0.65
TNFRSF11B-201ENST00000297350 ECM1Q16610 540 aa11.02□□□□□ -0.65
TNFRSF11B-201ENST00000297350 TUBB8Q3ZCM7 444 aa11.02□□□□□ -0.65
TNFRSF11B-201ENST00000297350 EPM2AIP1Q7L775 607 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF11B-201ENST00000297350 FBXO11Q86XK2 927 aa11.02□□□□□ -0.65
TNFRSF11B-201ENST00000297350 AENQ8WTP8 325 aaKnown RBP11.02□□□□□ -0.65
TNFRSF11B-201ENST00000297350 SCFD1Q8WVM8 642 aa11.02□□□□□ -0.65
TNFRSF11B-201ENST00000297350 CAPZA3Q96KX2 299 aa11.02□□□□□ -0.65
TNFRSF11B-201ENST00000297350 CAMKK2Q96RR4 588 aa11.02□□□□□ -0.65
TNFRSF11B-201ENST00000297350 LSM14BQ9BX40 385 aaKnown RBP11.02□□□□□ -0.65
TNFRSF11B-201ENST00000297350 PCDHGC5Q9Y5F6 944 aa11.02□□□□□ -0.65
TNFRSF11B-201ENST00000297350 CAPN6Q9Y6Q1 641 aa11.02□□□□□ -0.65
TNFRSF11B-201ENST00000297350 ERICH4A6NGS2 130 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 F8W031 263 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 MEIS2O14770 477 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 SSBP05455 408 aaKnown RBP eCLIP11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 PLEKP08567 350 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 SLC16A2P36021 539 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 TNNT3P45378 269 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 EPHB4P54760 987 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 ATP2B2Q01814 1243 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 APBA1Q02410 837 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 ADAM9Q13443 819 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 SLC15A2Q16348 729 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 ASIC2Q16515 512 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 TDRD12Q587J7 1177 aaKnown RBP11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 KRT26Q7Z3Y9 468 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 EIF1ADQ8N9N8 165 aaKnown RBP11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 SPATA4Q8NEY3 305 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 EEF2KMTQ96G04 330 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 EHMT1Q9H9B1 1298 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 POTEB3A0JP26 581 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 LRRIQ3A6PVS8 624 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 POTECB2RU33 542 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 E9PMD0 336 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 PDE2AO00408 941 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 SRGAP2O75044 1071 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 NOL4O94818 638 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 MOCS3O95396 460 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 LRRC41Q15345 812 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 KNOP1Q1ED39 458 aaKnown RBP11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 SYDE2Q5VT97 1194 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 POTEBQ6S5H4 581 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 CLEC10AQ8IUN9 316 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 GANQ9H2C0 597 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 DNAJC18Q9H819 358 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 ZCCHC17Q9NP64 241 aaKnown RBP11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 TYW1Q9NV66 732 aaKnown RBP11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 ARMCX3Q9UH62 379 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 DUSP10Q9Y6W6 482 aa11.01□□□□□ -0.65
TNFRSF11B-201ENST00000297350 EIF3DO15371 548 aaKnown RBP eCLIP11□□□□□ -0.65
TNFRSF11B-201ENST00000297350 TFRCP02786 760 aaKnown RBP11□□□□□ -0.65
TNFRSF11B-201ENST00000297350 LMAN1P49257 510 aa11□□□□□ -0.65
TNFRSF11B-201ENST00000297350 SCNN1DP51172 638 aa11□□□□□ -0.65
TNFRSF11B-201ENST00000297350 ZSCAN26Q16670 478 aa11□□□□□ -0.65
TNFRSF11B-201ENST00000297350 ALS2CLQ60I27 953 aa11□□□□□ -0.65
TNFRSF11B-201ENST00000297350 POTEAQ6S8J7 498 aa11□□□□□ -0.65
TNFRSF11B-201ENST00000297350 VPS36Q86VN1 386 aa11□□□□□ -0.65
TNFRSF11B-201ENST00000297350 CAVIN3Q969G5 261 aa11□□□□□ -0.65
TNFRSF11B-201ENST00000297350 SELENOOQ9BVL4 669 aa11□□□□□ -0.65
TNFRSF11B-201ENST00000297350 MLXIPQ9HAP2 919 aa11□□□□□ -0.65
TNFRSF11B-201ENST00000297350 OLFML3Q9NRN5 406 aa11□□□□□ -0.65
TNFRSF11B-201ENST00000297350 KCND2Q9NZV8 630 aa11□□□□□ -0.65
TNFRSF11B-201ENST00000297350 STIM2Q9P246 746 aa11□□□□□ -0.65
TNFRSF11B-201ENST00000297350 SEL1LQ9UBV2 794 aa11□□□□□ -0.65
TNFRSF11B-201ENST00000297350 INTUQ9ULD6 942 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms