RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 SMIM10L2AP0DMW4 78 aa20.41■□□□□ 0.86
SNRPA1-201ENST00000254193 SMIM10L2BP0DMW5 78 aa20.41■□□□□ 0.86
SNRPA1-201ENST00000254193 USP11P51784 963 aa20.41■□□□□ 0.86
SNRPA1-201ENST00000254193 ACTR2P61160 394 aa20.41■□□□□ 0.86
SNRPA1-201ENST00000254193 KRT25Q7Z3Z0 450 aa20.41■□□□□ 0.86
SNRPA1-201ENST00000254193 LENG9Q96B70 501 aa20.41■□□□□ 0.86
SNRPA1-201ENST00000254193 ZNF577Q9BSK1 485 aa20.41■□□□□ 0.86
SNRPA1-201ENST00000254193 RANBP2P49792 3224 aaKnown RBP20.41■□□□□ 0.86
SNRPA1-201ENST00000254193 SOX1O00570 391 aaPredicted RBP20.4■□□□□ 0.86
SNRPA1-201ENST00000254193 DHX15O43143 795 aaKnown RBP20.4■□□□□ 0.86
SNRPA1-201ENST00000254193 CCNE2O96020 404 aa20.4■□□□□ 0.86
SNRPA1-201ENST00000254193 ACRP10323 421 aa20.4■□□□□ 0.86
SNRPA1-201ENST00000254193 SETQ01105 290 aaPredicted RBP20.4■□□□□ 0.86
SNRPA1-201ENST00000254193 PPIGQ13427 754 aaKnown RBP eCLIP20.4■□□□□ 0.862e-11■■□□□ 12.5
SNRPA1-201ENST00000254193 NONOQ15233 471 aaKnown RBP eCLIP20.4■□□□□ 0.86
SNRPA1-201ENST00000254193 C16orf59Q7L2K0 433 aa20.4■□□□□ 0.86
SNRPA1-201ENST00000254193 GLG1Q92896 1179 aa20.4■□□□□ 0.86
SNRPA1-201ENST00000254193 SCLYQ96I15 445 aa20.4■□□□□ 0.86
SNRPA1-201ENST00000254193 PCYT2Q99447 389 aa20.4■□□□□ 0.86
SNRPA1-201ENST00000254193 BACH2Q9BYV9 841 aa20.4■□□□□ 0.86
SNRPA1-201ENST00000254193 RNPEPQ9H4A4 650 aa20.4■□□□□ 0.86
SNRPA1-201ENST00000254193 SH2B1Q9NRF2 756 aaPredicted RBP20.4■□□□□ 0.86
SNRPA1-201ENST00000254193 ZNF215Q9UL58 517 aaPredicted RBP20.4■□□□□ 0.86
SNRPA1-201ENST00000254193 SCN10AQ9Y5Y9 1956 aa20.4■□□□□ 0.86
SNRPA1-201ENST00000254193 CCDC194A0A1B0GVG4 234 aa20.39■□□□□ 0.85
SNRPA1-201ENST00000254193 ST18O60284 1047 aa20.39■□□□□ 0.85
SNRPA1-201ENST00000254193 MARK3P27448 753 aa20.39■□□□□ 0.85
SNRPA1-201ENST00000254193 INF2Q27J81 1249 aa20.39■□□□□ 0.85
SNRPA1-201ENST00000254193 DHX38Q92620 1227 aaKnown RBP20.39■□□□□ 0.85
SNRPA1-201ENST00000254193 LLPHQ9BRT6 129 aaKnown RBP20.39■□□□□ 0.85
SNRPA1-201ENST00000254193 SETD4Q9NVD3 440 aa20.39■□□□□ 0.85
SNRPA1-201ENST00000254193 C17orf102A2RUQ5 167 aa20.38■□□□□ 0.85
SNRPA1-201ENST00000254193 CD2BP2O95400 341 aaKnown RBP20.38■□□□□ 0.85
SNRPA1-201ENST00000254193 TDP2O95551 362 aa20.38■□□□□ 0.85
SNRPA1-201ENST00000254193 BFSP2Q13515 415 aa20.38■□□□□ 0.85
SNRPA1-201ENST00000254193 PIK3AP1Q6ZUJ8 805 aa20.38■□□□□ 0.85
SNRPA1-201ENST00000254193 RETREG2Q8NC44 543 aa20.38■□□□□ 0.85
SNRPA1-201ENST00000254193 SMARCAD1Q9H4L7 1026 aa20.38■□□□□ 0.85
SNRPA1-201ENST00000254193 CYP3A7-CYP3A51PA0A087WV96 503 aa20.37■□□□□ 0.85
SNRPA1-201ENST00000254193 MSH4O15457 936 aa20.37■□□□□ 0.85
SNRPA1-201ENST00000254193 LGR5O75473 907 aa20.37■□□□□ 0.85
SNRPA1-201ENST00000254193 CYP3A7P24462 503 aa20.37■□□□□ 0.85
SNRPA1-201ENST00000254193 HOXC8P31273 242 aa20.37■□□□□ 0.85
SNRPA1-201ENST00000254193 KRT2P35908 639 aa20.37■□□□□ 0.85
SNRPA1-201ENST00000254193 NR5A1Q13285 461 aa20.37■□□□□ 0.85
SNRPA1-201ENST00000254193 LRIT3Q3SXY7 679 aa20.37■□□□□ 0.85
SNRPA1-201ENST00000254193 EARS2Q5JPH6 523 aaKnown RBP20.37■□□□□ 0.85
SNRPA1-201ENST00000254193 KRT40Q6A162 431 aa20.37■□□□□ 0.85
SNRPA1-201ENST00000254193 ATP6V0A1Q93050 837 aa20.37■□□□□ 0.85
SNRPA1-201ENST00000254193 WNT8BQ93098 351 aa20.37■□□□□ 0.85
SNRPA1-201ENST00000254193 GJA10Q969M2 543 aa20.37■□□□□ 0.85
SNRPA1-201ENST00000254193 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.37■□□□□ 0.852e-8■□□□□ 10.7
SNRPA1-201ENST00000254193 AZI2Q9H6S1 392 aa20.37■□□□□ 0.85
SNRPA1-201ENST00000254193 IL23AQ9NPF7 189 aa20.37■□□□□ 0.85
SNRPA1-201ENST00000254193 TBC1D22BQ9NU19 505 aa20.37■□□□□ 0.85
SNRPA1-201ENST00000254193 ERAP1Q9NZ08 941 aa20.37■□□□□ 0.85
SNRPA1-201ENST00000254193 EMSYQ7Z589 1322 aa20.36■□□□□ 0.85
SNRPA1-201ENST00000254193 FAM205CA6NFA0 338 aa20.36■□□□□ 0.85
SNRPA1-201ENST00000254193 PITPNM1O00562 1244 aa20.36■□□□□ 0.85
SNRPA1-201ENST00000254193 ATG7O95352 703 aa20.36■□□□□ 0.85
SNRPA1-201ENST00000254193 MMP1P03956 469 aa20.36■□□□□ 0.85
SNRPA1-201ENST00000254193 IQCF3P0C7M6 154 aa20.36■□□□□ 0.85
SNRPA1-201ENST00000254193 PTK7Q13308 1070 aa20.36■□□□□ 0.85
SNRPA1-201ENST00000254193 TRIM29Q14134 588 aa20.36■□□□□ 0.85
SNRPA1-201ENST00000254193 LETM2Q2VYF4 491 aa20.36■□□□□ 0.85
SNRPA1-201ENST00000254193 TMEM240Q5SV17 173 aa20.36■□□□□ 0.85
SNRPA1-201ENST00000254193 ABHD15Q6UXT9 468 aa20.36■□□□□ 0.85
SNRPA1-201ENST00000254193 ZNF365Q70YC5 407 aa20.36■□□□□ 0.85
SNRPA1-201ENST00000254193 VWCEQ96DN2 955 aa20.36■□□□□ 0.85
SNRPA1-201ENST00000254193 LRCH3Q96II8 777 aa20.36■□□□□ 0.85
SNRPA1-201ENST00000254193 RNPC3Q96LT9 517 aaKnown RBP20.36■□□□□ 0.85
SNRPA1-201ENST00000254193 BRMS1Q9HCU9 246 aa20.36■□□□□ 0.85
SNRPA1-201ENST00000254193 LTBP2Q14767 1821 aa20.36■□□□□ 0.85
SNRPA1-201ENST00000254193 BTBD18B2RXH4 712 aa20.35■□□□□ 0.85
SNRPA1-201ENST00000254193 TREHO43280 583 aa20.35■□□□□ 0.85
SNRPA1-201ENST00000254193 STAT5BP51692 787 aa20.35■□□□□ 0.85
SNRPA1-201ENST00000254193 GUCY1B3Q02153 619 aa20.35■□□□□ 0.85
SNRPA1-201ENST00000254193 TRIM71Q2Q1W2 868 aaKnown RBP20.35■□□□□ 0.85
SNRPA1-201ENST00000254193 Q4G0T1 1027 aa20.35■□□□□ 0.85
SNRPA1-201ENST00000254193 SERINC5Q86VE9 423 aa20.35■□□□□ 0.85
SNRPA1-201ENST00000254193 CCDC155Q8N6L0 562 aa20.35■□□□□ 0.85
SNRPA1-201ENST00000254193 CAGE1Q8TC20 777 aa20.35■□□□□ 0.85
SNRPA1-201ENST00000254193 LMBR1Q8WVP7 490 aa20.35■□□□□ 0.85
SNRPA1-201ENST00000254193 TNFRSF25Q93038 417 aa20.35■□□□□ 0.85
SNRPA1-201ENST00000254193 MBOAT7Q96N66 472 aa20.35■□□□□ 0.85
SNRPA1-201ENST00000254193 IGKV6D-21A0A0A0MT36 114 aa20.34■□□□□ 0.85
SNRPA1-201ENST00000254193 RBAK-RBAKDNI3L0D1 243 aa20.34■□□□□ 0.85
SNRPA1-201ENST00000254193 BACH1O14867 736 aa20.34■□□□□ 0.85
SNRPA1-201ENST00000254193 CKBP12277 381 aa20.34■□□□□ 0.85
SNRPA1-201ENST00000254193 SELPP16109 830 aa20.34■□□□□ 0.85
SNRPA1-201ENST00000254193 PPFIA1Q13136 1202 aa20.34■□□□□ 0.85
SNRPA1-201ENST00000254193 ZNF746Q6NUN9 644 aaPredicted RBP20.34■□□□□ 0.85
SNRPA1-201ENST00000254193 MIS18BP1Q6P0N0 1132 aa20.34■□□□□ 0.85
SNRPA1-201ENST00000254193 PSRC1Q6PGN9 363 aaPredicted RBP20.34■□□□□ 0.85
SNRPA1-201ENST00000254193 PLPPR4Q7Z2D5 763 aa20.34■□□□□ 0.85
SNRPA1-201ENST00000254193 DEFB128Q7Z7B8 93 aa20.34■□□□□ 0.85
SNRPA1-201ENST00000254193 NEK8Q86SG6 692 aa20.34■□□□□ 0.85
SNRPA1-201ENST00000254193 DIS3L2Q8IYB7 885 aaKnown RBP20.34■□□□□ 0.85
SNRPA1-201ENST00000254193 AFAP1L1Q8TED9 768 aa20.34■□□□□ 0.85
SNRPA1-201ENST00000254193 SLC5A5Q92911 643 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms