RNA–Protein interactions for RNA: ENSMUST00000209364.1

Prpf40a-206, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 2,833 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-206ENSMUST00000209364 Scfd2Q8BTY8 684 aa13.97□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Setdb2Q8C267 713 aa13.97□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Trim9Q8C7M3 817 aa13.97□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Ndfip2Q91ZP6 311 aa13.97□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 GrapQ9CX99 217 aa13.97□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Mss51Q9D5Z5 446 aa13.97□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Pdzrn4E9PUZ9 1014 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Cap1P40124 474 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Tab3Q571K4 716 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Vgll2Q8BGW8 322 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Bpifb6Q8BU51 449 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Fam161bQ8CB59 589 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Bst2Q8R2Q8 172 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Ushbp1Q8R370 680 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Slf1Q8R3P9 1054 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Bhmt2Q91WS4 363 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Mettl16Q9CQG2 553 aaKnown RBP13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Itga2bQ9QUM0 1033 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Coro1cQ9WUM4 474 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 GsdmeQ9Z2D3 512 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Scn3aA2ASI5 1947 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Rad51bO35719 350 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Nedd4P46935 887 aaKnown RBP13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Ankrd40Q5SUE8 363 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Acad11Q80XL6 779 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Aldh5a1Q8BWF0 523 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Znf428Q8C1M2 176 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Txndc5Q91W90 417 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Ubiad1Q9DC60 336 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Slc26a4Q9R155 780 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Bub1bQ9Z1S0 1052 aa13.96□□□□□ -0.17
Prpf40a-206ENSMUST00000209364 Lrrfip1Q3UZ39 729 aaKnown RBP13.96□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Cct6bQ61390 531 aa13.96□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Stxbp2Q64324 593 aa13.96□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Leng8Q8CBY3 785 aaKnown RBP13.96□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Ifih1Q8R5F7 1025 aa13.96□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Spata1Q9D5R4 444 aa13.96□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Pdcd6ipQ9WU78 869 aaKnown RBP13.96□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Plcb1Q9Z1B3 1216 aa13.96□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 IkQ9Z1M8 557 aaKnown RBP13.96□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Ccdc88cQ6VGS5 2009 aa13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Gm5737A0A140LI11 423 aa13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Gm4307E9PZY4 289 aa13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Gm4312K9J7E2 289 aa13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Sfi1Q3UZY0 1216 aaKnown RBP13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Prr7Q3V0I2 269 aa13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Peg10Q7TN75 958 aaKnown RBP13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Cplx4Q80WM3 160 aa13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Sash3Q8K352 380 aa13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Dppa3Q8QZY3 150 aa13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Mical1Q8VDP3 1048 aa13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Krt79Q8VED5 531 aa13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Snapc2Q91XA5 359 aa13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Mrpl11Q9CQF0 192 aaKnown RBP13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Prl2c5Q9JLV9 222 aa13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Nol4P60954 483 aa13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Krt86P97861 486 aa13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Sorbs1Q62417 1290 aa13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Asic1Q6NXK8 526 aa13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Lmbrd1Q8K0B2 537 aa13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Sgsm3Q8VCZ6 750 aa13.95□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Bpifb4A2BGH0 617 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Apol8A2VDH7 339 aaKnown RBP13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 GpiP06745 558 aaKnown RBP13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 PpardP35396 440 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Flt3Q00342 1000 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Atp13a3Q5XF89 1219 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Wdr44Q6NVE8 915 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 PolnQ7TQ07 864 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Rasal3Q8C2K5 1041 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Havcr2Q8VIM0 281 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 EhhadhQ9DBM2 718 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Git2Q9JLQ2 708 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Vav3Q9R0C8 847 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Glt1d1A4FUP9 346 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Rexo5D3YW29 759 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Nkx2-5P42582 318 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Ttf2Q5NC05 1138 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Nab2Q61127 525 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Mrps31Q61733 384 aaKnown RBP13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Myo6Q64331 1265 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Ctdp1Q7TSG2 960 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Als2cr12Q8BVM7 383 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 SncbQ91ZZ3 133 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Abhd2Q9QXM0 425 aa13.94□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Scgb2b18A0A087WPA9 112 aa13.93□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Pde8aO88502 823 aa13.93□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Mpp3O88910 568 aa13.93□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 LdhbP16125 334 aaKnown RBP13.93□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Sox5P35710 763 aa13.93□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Psen2Q61144 448 aa13.93□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Gga2Q6P5E6 603 aa13.93□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Apol10aQ8CCA5 318 aa13.93□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Pcdhb3Q91XZ7 784 aa13.93□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 MymkQ9D1N4 221 aa13.93□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Calr3Q9D9Q6 380 aa13.93□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Ddx23D3Z0M9 819 aaKnown RBP13.93□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Pcdha4O88689 947 aa13.93□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 FosP01101 380 aa13.93□□□□□ -0.18
Prpf40a-206ENSMUST00000209364 Pcif1P59114 706 aa13.93□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms