RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Pitpnm2Q6ZPQ6 1335 aa13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Ift81O35594 676 aa13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Men1O88559 611 aaKnown RBP13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Gjb6P70689 261 aa13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Nlrp14Q6B966 993 aa13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Galnt17Q7TT15 598 aa13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 OtoaQ8K561 1137 aa13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Rev1Q920Q2 1249 aa13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Gimap4Q99JY3 219 aa13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Gdap2Q9DBL2 498 aa13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Homer1Q9Z2Y3 366 aa13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 MypnQ5DTJ9 1315 aa13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Zfp839E9PUU5 921 aa13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 R3hdm1E9Q9Q2 1135 aaKnown RBP13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Sept7O55131 436 aa13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Garnl3Q3V0G7 1038 aa13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Xlr3cQ61806 226 aa13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Tspyl5Q69ZB3 406 aa13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Mindy1Q76LS9 468 aa13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Dbndd1Q9CZ00 160 aa13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Eef1gQ9D8N0 437 aaKnown RBP13.39□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Mroh1E0CZ22 1640 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Cyp2d9P11714 504 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Tbx22Q8K402 517 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Riok1Q922Q2 567 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Fgfr1op2Q9CRA9 253 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Efhd1Q9D4J1 240 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Cabp5Q9JLK3 173 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Cetn3O35648 167 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Znf827Q505G8 1078 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Edrf1Q6GQV7 1239 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Ccser1Q8C0C4 895 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Cep19Q9CQA8 163 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Tex9Q9D845 387 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Tacc2Q9JJG0 1149 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Tjp2Q9Z0U1 1167 aaKnown RBP13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 RereQ80TZ9 1558 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Kiaa1522A2A7S8 1013 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Mmrn1B2RPV6 1210 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Krt78E9Q0F0 1068 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Uhmk1P97343 419 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Cdcp1Q5U462 833 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Ces1eQ64176 562 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Mettl25Q6NXH8 597 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Prpf38bQ80SY5 542 aaKnown RBP13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Lrrc4cQ8C031 640 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Lrrc41Q8K1C9 807 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Dph6Q9CQ28 267 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Mtfr1lQ9CWE0 289 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Itgb1bp2Q9R000 350 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Cib2Q9Z309 187 aa13.38□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Frmd7A2AD83 703 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Gm5134E9QAB5 671 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Gm6121L7MUF1 212 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Stmn4P63042 189 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Tbc1d2bQ3U0J8 965 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Rasgrp4Q8BTM9 673 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Zfp449Q8CB76 518 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Ccdc28aQ8CEI3 192 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Q8K2W9 541 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Fkbp6Q91XW8 327 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Setd6Q9CWY3 473 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Ccdc124Q9D8X2 217 aaKnown RBP13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Rsph3bQ9DA80 389 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Arhgap33Q80YF9 1305 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Btbd18A0A0A6YY25 723 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Flot1O08917 428 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Polr2fP61219 127 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Shox2P70390 331 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Fxr1Q61584 677 aaKnown RBP13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Fkbp3Q62446 224 aaKnown RBP13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Klhl23Q6GQU2 558 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Lrrc8cQ8R502 803 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Olfr805Q8VFI4 319 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Scgb2b21A0A087WQA9 112 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Zfp408H7BX78 710 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Abcb4P21440 1276 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Nr5a1P33242 462 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Stat4P42228 749 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Card10P58660 1021 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Pyroxd1Q3TMV7 498 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Ccpg1Q640L3 753 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Cyp26b1Q811W2 512 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Gcfc2Q8BKT3 769 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 IntS13Q8QZV7 732 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Ushbp1Q8R370 680 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 IcoslgQ9JHJ8 322 aa13.37□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 NktrP30415 1453 aa13.36□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Dennd3A2RT67 1274 aa13.36□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Prr16A3KMN5 304 aa13.36□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Guca2bO09051 106 aa13.36□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Kcna3P16390 528 aa13.36□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Hps5P59438 1126 aa13.36□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Tsg101Q61187 391 aa13.36□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 ZyxQ62523 564 aa13.36□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Tlr13Q6R5N8 991 aa13.36□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 L3mbtl3Q8BLB7 883 aa13.36□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Ldlrap1Q8C142 308 aa13.36□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Ufl1Q8CCJ3 793 aaKnown RBP13.36□□□□□ -0.27
Pcdh1-202ENSMUST00000159405 Glrx3Q9CQM9 337 aa13.36□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms